Personal tools

MacroAPE 1083:Motif290

From FANTOM5_SSTAR

Revision as of 13:22, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: motif290

Motif matrix
POACGT
01052361474583935
025101131247151935088
03020612397152171
04136416341509592672
05793942661375486876
06882127471400565005
0716944114121199548319
0829716279718043418508

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

opa#MA0456.120.0009229440.4393210.3614658GCTGGGGGCAGCGGGGGGTC-
NHP10#MA0344.100.001064580.506740.3614658GCTGGGGGGCCGGGGA+
MIG1#MA0337.1-10.001148530.5466990.3614657GCTGGGGGGCGGGGG-
ACE2#MA0267.110.001648090.7844910.3890166GCTGGGGGTGCTGGT-
YPR022C#MA0436.100.002564511.220710.4437097GCTGGGGGCGTGGGG-
ADR1#MA0268.1-10.003176471.5120.4437097GCTGGGGGGTGGGGT-
SWI5#MA0402.110.00370531.763720.4437097GCTGGGGGTGCTGGTT+
INSM1#MA0155.120.00375961.789570.4437098GCTGGGGGTGTCAGGGGGCG+
EBF1#MA0154.120.005100162.427680.4572938GCTGGGGGTCCCTTGGGT-
MET28#MA0332.1-10.005144292.448680.4572936GCTGGGGGCTGTGG+
RDS2#MA0362.1-10.005379032.560420.4572937GCTGGGGGCTCGGGG+
MIG3#MA0339.100.005812052.766530.4572937GCTGGGGGTGCGGGG-
MIG2#MA0338.100.006808653.240920.4944987GCTGGGGGTGCGGGG-
Mafb#MA0117.100.008384173.990870.5547528GCTGGGGGGCTGACGG+
MZF1_1-4#MA0056.1-20.008813414.195180.5547526GCTGGGGGTGGGGA+
Klf4#MA0039.220.01093475.204920.5834898GCTGGGGGTGGGTGGGGC+
MET4#MA0335.110.01122865.34480.5834897GCTGGGGGAACTGTGG+
NHLH1#MA0048.150.01189185.660510.5834897GCTGGGGGACGCAGCTGCGC-
TFAP2A#MA0003.100.0131426.255580.5834898GCTGGGGGCCCCCGGGC-
REI1#MA0364.100.01381016.573590.5834897GCTGGGGGTCAGGGG-
znf143#MA0088.190.01420546.761770.5834898GCTGGGGGGCAAGGCATGATGGGAAATC-
Macho-1#MA0118.1-10.01515997.21610.5834897GCTGGGGGTGGGGGGTC+
ZMS1#MA0441.110.01515997.21610.5834898GCTGGGGGTGCGGGGAA-
SUT1#MA0399.110.01544997.354160.5834896GCTGGGGGCGCGGGG+
RREB1#MA0073.120.01660887.905770.6031298GCTGGGGGTGGGGGGGGGTGGTTTGGGG-
RPN4#MA0373.100.01856388.836390.646037GCTGGGGGGGTGGCG+
YGR067C#MA0425.160.01915869.119490.646038GCTGGGGGTGAAAAAGTGGGGT-