Personal tools

MacroAPE 1083:CNhs11284 bl f2

From FANTOM5_SSTAR

Revision as of 13:55, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: CNhs11284_bl_f2

Motif matrix
POACGT
1608.94316797615931703.2882677340172162.16570210176235473.4663524633677
21452.316305068382301.7312027806530653.0640950402833061140.7518873859876
31085.9246029849212572.0466102250311153.6613094278632136.2309676374918
4446.4230880757801918.871136412418610.3097881621698972.2594776249383
5620.58720752813242077.9986296465136114.20220232848834135.07545077217728
61.99731568628377188.7664071865577432.1867195066739092934.913047895806
74.7825956164973832613.29032221914887.16501795076866242.62555448890714
847.047598765384036.4096584827105445.0073277538264172889.3989052734
9155.23110475205448350.47463761714161521.8376395076828920.3201083984277
10700.00138431384051015.4640104258001323.6877073543744908.7103881812903
111069.907028893567519.3366879110704872.0166525009101486.6031209697581
121232.929141119561722.3261517710607342.15418350649827650.4540138781874

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

ECM23#MA0293.110.005265722.50648110CAGTCTCTGCAATTTAGATCTTT-
ABF1#MA0265.100.006466113.07787112CAGTCTCTGCAAATATCACTTTATACGA-
ARO80#MA0273.130.007330663.48939112CAGTCTCTGCAAGATAATTCTCGGCAAGTATGT+
GAT4#MA0302.100.008648594.11673111CAGTCTCTGCAAAAAGATCTAAA+
Trl#MA0205.110.01986699.4566619CAGTCTCTGCAATTGCTCTCTC+