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MacroAPE 1083:NKX21 f1

From FANTOM5_SSTAR

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Full Name: NKX21_f1

Motif matrix
POACGT
17.992875647668407540.40997409326427523.47733160621764313.451424870466367
29.80310880829015720.4974093264248723.230569948186535551.80051813471506
30.1392487046632123553.4993523316062118.96567357512958612.727331606217668
458.289507772020735.15220207253886819.5226683937824252.367227979274613
585.331606217616610.00.00.0
61.00259067357512750.084.329015544041540.0
711.836139896373113.14702072538860531.9993523316062638.34909326424878
814.1476683937824370.059.04145077720214412.142487046632114
95.26360103626943644.58743523316070416.40349740932642319.077072538860104
1017.26683937823835524.0621761658031111.02849740932643632.97409326424879

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

tin#MA0247.106.50306e-060.003095450.00618288CTCAAGTGCTCTCAAGTG+
ceh-22#MA0264.111.75946e-050.008375020.0083640510CTCAAGTGCTTTTCAAGTGGT-
vnd#MA0253.110.0002747670.1307890.08707848CTCAAGTGCTTTTCAAGTG+
Nkx3-2#MA0122.1-10.0006601590.3142360.1569129CTCAAGTGCTTTAAGTGGA+
Esrrb#MA0141.120.003762671.791030.71547410CTCAAGTGCTAGCTCAAGGTCA+
CBF1#MA0281.1-10.004582312.181180.7261088CTCAAGTGCTTCACGTGC-
bap#MA0211.1-10.00693193.299580.9415047CTCAAGTGCTTTAAGTG+
Pax5#MA0014.180.01077235.127620.99869110CTCAAGTGCTCCGCTACGCTTCAGTGCTCT-
EBF1#MA0154.110.01413286.72720.9986919CTCAAGTGCTACCCAAGGGA+
Hltf#MA0109.110.01493397.108560.9986919CTCAAGTGCTATATAAGGTT-
Nkx2-5#MA0063.1-10.01586197.550250.9986917CTCAAGTGCTTTAATTG+
Myc#MA0147.100.01665527.927870.99869110CTCAAGTGCTGCCACGTGCG-
Mycn#MA0104.200.01757868.367420.99869110CTCAAGTGCTGCCACGTGCG-
Myb#MA0100.1-20.01855568.832460.9986918CTCAAGTGCTCAACGGCC-
TYE7#MA0409.1-10.02013339.583440.9986917CTCAAGTGCTTCACGTG-