Personal tools

MacroAPE 1083:Motif GCAANT

From FANTOM5_SSTAR

Revision as of 14:43, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: motif_GCAANT

Motif matrix
POACGT
010040480
020404800
034048000
044048000
051012101210121012
060004048

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

nub#MA0453.130.005845942.7826716GCAAATTATGCAAATTAG+
Dll#MA0187.100.00790363.7621216GCAAATGTAATTA-
Pou5f1#MA0142.190.007951263.784816GCAAATCTTTGTTATGCAAAT+
Dr#MA0188.100.0117235.5801216GCAAATCCAATTA+
ARR1#MA0274.120.0169968.0900916GCAAATATTCAAGT-
Nobox#MA0125.110.01845938.7866316GCAAATACCAATTA-
DAL82#MA0291.120.01884798.971616GCAAATGCGCACATT-