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Revision as of 09:50, 30 May 2013

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant162
  • db :UNIPROBE
  • Id :Zfp410_primary
  • name :SCI09
  • score :0.04967759772555392
  • External refs:
EntrezGene:52708
UniProt:52708

  • Internal refs:
EntrezGene:52708


Motif matrix
P0ACGT
10.3028370361380410.1330173126253790.2499403952485470.314205255988032
20.3785424530048560.1864250767501270.2507004681522630.184332002092754
30.1847802892939930.144328692444230.2627658161691180.408125202092659
40.3085691231030140.03968937417772040.235694547409160.416046955310106
50.8177382075078990.1089375199173770.03341900412431130.039905268450413
60.01899578504543610.007717531435376990.01317472101393390.960111962505253
70.009278299840122040.002421683018169770.9739211363803920.0143788807613158
80.005586703156235520.002692793898954230.9850875272011990.00663297574361129
90.005874499805216110.004231637703447870.9769265898550960.0129672726362398
100.9513085016992540.01183531047988480.02318715043237710.0136690373884841
110.005926748277962390.00452082823274930.005701334850751520.983851088638537
120.146442641599350.00300867268772930.8407199165244290.00982876918849116
130.002552633087053350.04450381397493550.542059054941640.410884497996371
140.4062988844257040.3757820816861150.1339218370532740.0839971968349069
150.2568838381249980.1601843355209920.2711900189028570.311741807451154
160.3883805445588780.1418108613302920.2146001391498060.255208454961024
170.340876927653870.274386844204530.2055848668434670.179151361298133

Sub Motif Members