Template:FFCP: Difference between revisions
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== Ontology-based sample term enrichment analysis == | == Ontology-based sample term enrichment analysis == | ||
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{{#if: {{#pos:{{{ontology_enrichment_celltype}}}|CL}} | | {{#if: {{#pos:{{{ontology_enrichment_celltype}}}|CL}} | | ||
{{#arraymap:{{{ontology_enrichment_celltype}}}|;|$|{{#set:ffcp_ontology_enrichment_celltype={{#replace:$|!|;}}}}}} | {{#arraymap:{{{ontology_enrichment_celltype}}}|;|$|{{#set:ffcp_ontology_enrichment_celltype={{#replace:$|!|;}}}}}} | ||
<table class="wikitable mw-collapsible" style="float:left;"><tr><th scope="col">Cell Type (CL)</th></tr><tr><td> | <table class="wikitable mw-collapsible" style="float:left;"><tr><th scope="col">Cell Type (CL)</th></tr><tr><td> | ||
<div style="height:300px; overflow-y:scroll; resize:both;"> | <div style="height:300px; overflow-y:scroll; resize:both;"> | ||
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{{#if: {{#pos:{{{ontology_enrichment_disease}}}|DOID}} | | {{#if: {{#pos:{{{ontology_enrichment_disease}}}|DOID}} | | ||
{{#arraymap:{{{ontology_enrichment_disease}}}|;|$|{{#set:ffcp_ontology_enrichment_disease={{#replace:$|!|;}}}}}} | {{#arraymap:{{{ontology_enrichment_disease}}}|;|$|{{#set:ffcp_ontology_enrichment_disease={{#replace:$|!|;}}}}}} | ||
<table class="wikitable mw-collapsible" style="float:left;"><tr><th scope="col">Human Disease (DOID)</th></tr><tr><td> | <table class="wikitable mw-collapsible" style="float:left;"><tr><th scope="col">Human Disease (DOID)</th></tr><tr><td> | ||
<div style="height:300px; overflow-y:scroll; resize:both;"> | <div style="height:300px; overflow-y:scroll; resize:both;"> | ||
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{{#if: {{#pos:{{{ontology_enrichment_uberon}}}|UBERON}} | | {{#if: {{#pos:{{{ontology_enrichment_uberon}}}|UBERON}} | | ||
{{#arraymap:{{{ontology_enrichment_uberon}}}|;|$|{{#set:ffcp_ontology_enrichment_uberon={{#replace:$|!|;}}}}}} | {{#arraymap:{{{ontology_enrichment_uberon}}}|;|$|{{#set:ffcp_ontology_enrichment_uberon={{#replace:$|!|;}}}}}} | ||
<table class="wikitable mw-collapsible" style="float:left;"><tr><th scope="col">Uber Anatomy (UBERON)</th></tr><tr><td> | <table class="wikitable mw-collapsible" style="float:left;"><tr><th scope="col">Uber Anatomy (UBERON)</th></tr><tr><td> | ||
<div style="height:300px; overflow-y:scroll; resize:both;"> | <div style="height:300px; overflow-y:scroll; resize:both;"> | ||
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</div></td></tr></table> | </div></td></tr></table> | ||
}} | }} | ||
--> | |||
<div style="clear:both;"></div> | <div style="clear:both;"></div> | ||
Revision as of 15:20, 31 July 2012
| short description: | |
|---|---|
| EntrezGene: | [[EntrezGene%3A{{{EntrezGene}}}|{{{EntrezGene}}}]] |
| description: | |
| Species: | |
| association with transcript: | |
| HGNC: | |
| UniProt: |
View on UCSC genome browser OSC local mirror
Mouse over to see Genome browser image, Click image to go to Genome browser
{{#ucsc_link:Template:FFCP|https://fantom5-collaboration.gsc.riken.jp/ucsc/}}
CAGE Expression
| sample | TPM value |
|---|
- Click each plot point to find sample in table
