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CL:0000148

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Name:melanocyte
Namespace:FANTOM
Definition:"A pigment cell derived from the neural crest. Contains melanin-filled pigment granules, which gives a brown to black appearance." [SANBI:mhl]
Xrefs:
links:

BTO:0000847

FMA:70545
Synonyms: "melanophore" NARROW []
Alt_id: CL:0000572


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data

Parents

is_a:CL:0000147(pigment cell),CL:0000710(neurecto-epithelial cell)
develops_from:CL:0000541(melanoblast)



Children


is a:CL:0002566 (dark melanocyte),CL:0002567 (light melanocyte)
derives from:FF:0000334 (melanocytic induction sample),FF:0000730 (human melanocyte (MC) sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000148 (melanocyte), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data

P-valueFFCPShort description
3.89e-139FFCP PHASE1:Hg19::chrX:9707625..9707629,-#_97e66c5549b85c7278cd400896fe47e4p6@GPR143
3.89e-139FFCP PHASE2:Hg19::chrX:9707625..9707629,-#_97e66c5549b85c7278cd400896fe47e4p6@GPR143
5.38e-137FFCP PHASE2:Hg19::chr9:12709332..12709345,+#_b5ee633eb81f31b7dae3af069b9c1a09p@chr9:12709332..12709345, +
5.38e-137FFCP PHASE2:Hg19::chr9:12695585..12695593,+#_b5ee633eb81f31b7dae3af069b9c1a09p24@TYRP1
5.38e-137FFCP PHASE1:Hg19::chr1:1497497..1497523,-#_b5ee633eb81f31b7dae3af069b9c1a09p1@AK129493
5.38e-137FFCP PHASE1:Hg19::chr9:12708978..12708990,+#_b5ee633eb81f31b7dae3af069b9c1a09p@chr9:12708978..12708990, +
5.38e-137FFCP PHASE1:Hg19::chr6:4610902..4610913,+#_b5ee633eb81f31b7dae3af069b9c1a09p1@ENST00000380106
5.38e-137FFCP PHASE2:Hg19::chr9:12708978..12708990,+#_b5ee633eb81f31b7dae3af069b9c1a09p@chr9:12708978..12708990, +
5.38e-137FFCP PHASE2:Hg19::chr6:4610902..4610913,+#_b5ee633eb81f31b7dae3af069b9c1a09p1@ENST00000380106
5.38e-137FFCP PHASE2:Hg19::chr9:12702367..12702377,+#_b5ee633eb81f31b7dae3af069b9c1a09p@chr9:12702367..12702377, +
5.38e-137FFCP PHASE1:Hg19::chr9:12693291..12693298,+#_b5ee633eb81f31b7dae3af069b9c1a09p33@TYRP1
5.38e-137FFCP PHASE1:Hg19::chr9:12709332..12709345,+#_b5ee633eb81f31b7dae3af069b9c1a09p@chr9:12709332..12709345, +
5.38e-137FFCP PHASE1:Hg19::chr1:154401791..154401807,+#_b5ee633eb81f31b7dae3af069b9c1a09p11@IL6R
5.38e-137FFCP PHASE1:Hg19::chr9:12708060..12708071,-#_b5ee633eb81f31b7dae3af069b9c1a09p@chr9:12708060..12708071, -
5.38e-137FFCP PHASE1:Hg19::chr9:12702367..12702377,+#_b5ee633eb81f31b7dae3af069b9c1a09p@chr9:12702367..12702377, +
5.38e-137FFCP PHASE1:Hg19::chr16:89986251..89986268,+#_b5ee633eb81f31b7dae3af069b9c1a09p@chr16:89986251..89986268, +
5.38e-137FFCP PHASE2:Hg19::chr1:1497497..1497523,-#_b5ee633eb81f31b7dae3af069b9c1a09p1@AK129493
5.38e-137FFCP PHASE2:Hg19::chr9:12708060..12708071,-#_b5ee633eb81f31b7dae3af069b9c1a09p@chr9:12708060..12708071, -
5.38e-137FFCP PHASE2:Hg19::chr19:3557867..3557877,-#_b5ee633eb81f31b7dae3af069b9c1a09p7@MFSD12
5.38e-137FFCP PHASE1:Hg19::chr19:3557867..3557877,-#_b5ee633eb81f31b7dae3af069b9c1a09p7@MFSD12
5.38e-137FFCP PHASE2:Hg19::chr9:12693291..12693298,+#_b5ee633eb81f31b7dae3af069b9c1a09p33@TYRP1
5.38e-137FFCP PHASE2:Hg19::chr16:89986251..89986268,+#_b5ee633eb81f31b7dae3af069b9c1a09p@chr16:89986251..89986268, +
5.38e-137FFCP PHASE1:Hg19::chr9:12695585..12695593,+#_b5ee633eb81f31b7dae3af069b9c1a09p24@TYRP1
5.38e-137FFCP PHASE2:Hg19::chr1:154401791..154401807,+#_b5ee633eb81f31b7dae3af069b9c1a09p11@IL6R
3.56e-120FFCP PHASE1:Hg19::chr1:1497528..1497559,-#_9268d0d7b6ac6d5dc43db8d4a9d3d713p2@AK129493
3.56e-120FFCP PHASE2:Hg19::chr1:1497528..1497559,-#_9268d0d7b6ac6d5dc43db8d4a9d3d713p2@AK129493
3.56e-120FFCP PHASE2:Hg19::chr19:3557918..3557927,-#_9268d0d7b6ac6d5dc43db8d4a9d3d713p8@MFSD12
3.56e-120FFCP PHASE1:Hg19::chr19:3557918..3557927,-#_9268d0d7b6ac6d5dc43db8d4a9d3d713p8@MFSD12
4.24e-120FFCP PHASE2:Hg19::chr9:12704349..12704362,+#_8d1c05573039ab914061bcac9a3c951cp@chr9:12704349..12704362, +
4.24e-120FFCP PHASE1:Hg19::chr5:159894810..159894819,+#_8d1c05573039ab914061bcac9a3c951cp12@uc003lyl.3
4.24e-120FFCP PHASE1:Hg19::chr9:12701182..12701196,+#_8d1c05573039ab914061bcac9a3c951cp19@TYRP1
4.24e-120FFCP PHASE1:Hg19::chr9:12704349..12704362,+#_8d1c05573039ab914061bcac9a3c951cp@chr9:12704349..12704362, +
4.24e-120FFCP PHASE2:Hg19::chr5:159894810..159894819,+#_8d1c05573039ab914061bcac9a3c951cp12@uc003lyl.3
4.24e-120FFCP PHASE1:Hg19::chr9:12693559..12693562,+#_8d1c05573039ab914061bcac9a3c951cp22@TYRP1
4.24e-120FFCP PHASE1:Hg19::chr9:12708011..12708027,+#_8d1c05573039ab914061bcac9a3c951cp27@TYRP1
4.24e-120FFCP PHASE2:Hg19::chr9:12708011..12708027,+#_8d1c05573039ab914061bcac9a3c951cp27@TYRP1
4.24e-120FFCP PHASE2:Hg19::chr9:12701182..12701196,+#_8d1c05573039ab914061bcac9a3c951cp19@TYRP1
4.24e-120FFCP PHASE2:Hg19::chr9:12693559..12693562,+#_8d1c05573039ab914061bcac9a3c951cp22@TYRP1
5.06e-120FFCP PHASE1:Hg19::chr15:28344426..28344431,-#_7fce9dafc771a0648a834dc520847463p2@OCA2
5.06e-120FFCP PHASE2:Hg19::chr15:28344426..28344431,-#_7fce9dafc771a0648a834dc520847463p2@OCA2
5.06e-120FFCP PHASE2:Hg19::chr9:12704539..12704547,+#_7fce9dafc771a0648a834dc520847463p@chr9:12704539..12704547, +
5.06e-120FFCP PHASE1:Hg19::chr9:12704539..12704547,+#_7fce9dafc771a0648a834dc520847463p@chr9:12704539..12704547, +
6.04e-120FFCP PHASE2:Hg19::chr9:12695674..12695681,+#_f8a04e9a3043341733288908852978f2p36@TYRP1
6.04e-120FFCP PHASE1:Hg19::chr9:12695674..12695681,+#_f8a04e9a3043341733288908852978f2p36@TYRP1
7.21e-120FFCP PHASE2:Hg19::chr12:56351078..56351092,-#_c32355bc9edc43477ca6baae5c4054aep@chr12:56351078..56351092, -
7.21e-120FFCP PHASE1:Hg19::chr12:56351078..56351092,-#_c32355bc9edc43477ca6baae5c4054ae-, p@chr12:56351078..56351092
1.29e-117FFCP PHASE1:Hg19::chr6:4610888..4610895,+#_976af084a4f136a3f79b3f4dad601dd7p2@ENST00000380106
1.29e-117FFCP PHASE2:Hg19::chr1:1497566..1497576,-#_976af084a4f136a3f79b3f4dad601dd7p3@AK129493
1.29e-117FFCP PHASE2:Hg19::chr11:48066945..48066951,+#_976af084a4f136a3f79b3f4dad601dd7p@chr11:48066945..48066951, +
1.29e-117FFCP PHASE1:Hg19::chr9:12704666..12704671,+#_976af084a4f136a3f79b3f4dad601dd7p@chr9:12704666..12704671, +
1.29e-117FFCP PHASE2:Hg19::chr22:20878094..20878105,+#_976af084a4f136a3f79b3f4dad601dd7p41@MED15
1.29e-117FFCP PHASE1:Hg19::chr9:12701691..12701717,+#_976af084a4f136a3f79b3f4dad601dd7p34@TYRP1
1.29e-117FFCP PHASE1:Hg19::chr15:28360857..28360860,-#_976af084a4f136a3f79b3f4dad601dd7p@chr15:28360857..28360860, -
1.29e-117FFCP PHASE2:Hg19::chr6:4610888..4610895,+#_976af084a4f136a3f79b3f4dad601dd7p2@ENST00000380106
1.29e-117FFCP PHASE2:Hg19::chr15:28360857..28360860,-#_976af084a4f136a3f79b3f4dad601dd7p@chr15:28360857..28360860, -
1.29e-117FFCP PHASE1:Hg19::chr17:77923816..77923828,-#_976af084a4f136a3f79b3f4dad601dd7p@chr17:77923816..77923828, -
1.29e-117FFCP PHASE1:Hg19::chr15:42694665..42694671,+#_976af084a4f136a3f79b3f4dad601dd7p16@CAPN3
1.29e-117FFCP PHASE2:Hg19::chr9:12709019..12709029,+#_976af084a4f136a3f79b3f4dad601dd7p@chr9:12709019..12709029, +
1.29e-117FFCP PHASE2:Hg19::chr11:2920857..2920864,+#_976af084a4f136a3f79b3f4dad601dd7p13@SLC22A18
1.29e-117FFCP PHASE2:Hg19::chr19:3557800..3557811,-#_976af084a4f136a3f79b3f4dad601dd7p9@MFSD12
1.29e-117FFCP PHASE1:Hg19::chr19:3557800..3557811,-#_976af084a4f136a3f79b3f4dad601dd7p9@MFSD12
1.29e-117FFCP PHASE1:Hg19::chr9:12709200..12709209,+#_976af084a4f136a3f79b3f4dad601dd7p@chr9:12709200..12709209, +
1.29e-117FFCP PHASE1:Hg19::chr3:69951861..69951868,+#_976af084a4f136a3f79b3f4dad601dd7p@chr3:69951861..69951868, +
1.29e-117FFCP PHASE2:Hg19::chr1:1497446..1497455,-#_976af084a4f136a3f79b3f4dad601dd7p4@AK129493
1.29e-117FFCP PHASE1:Hg19::chr22:20878094..20878105,+#_976af084a4f136a3f79b3f4dad601dd7p41@MED15
1.29e-117FFCP PHASE1:Hg19::chr1:212594718..212594723,+#_976af084a4f136a3f79b3f4dad601dd7p@chr1:212594718..212594723, +
1.29e-117FFCP PHASE1:Hg19::chr1:1497566..1497576,-#_976af084a4f136a3f79b3f4dad601dd7p3@AK129493
1.29e-117FFCP PHASE1:Hg19::chr9:12709019..12709029,+#_976af084a4f136a3f79b3f4dad601dd7p@chr9:12709019..12709029, +
1.29e-117FFCP PHASE2:Hg19::chr17:77925869..77925876,-#_976af084a4f136a3f79b3f4dad601dd7p@chr17:77925869..77925876, -
1.29e-117FFCP PHASE2:Hg19::chr1:212594718..212594723,+#_976af084a4f136a3f79b3f4dad601dd7p@chr1:212594718..212594723, +
1.29e-117FFCP PHASE1:Hg19::chr2:128400821..128400830,-#_976af084a4f136a3f79b3f4dad601dd7p39@LIMS2
1.29e-117FFCP PHASE2:Hg19::chr2:128400821..128400830,-#_976af084a4f136a3f79b3f4dad601dd7p39@LIMS2
1.29e-117FFCP PHASE2:Hg19::chr9:12709200..12709209,+#_976af084a4f136a3f79b3f4dad601dd7p@chr9:12709200..12709209, +
1.29e-117FFCP PHASE1:Hg19::chr17:77925869..77925876,-#_976af084a4f136a3f79b3f4dad601dd7p@chr17:77925869..77925876, -
1.29e-117FFCP PHASE1:Hg19::chr15:28360793..28360804,-#_976af084a4f136a3f79b3f4dad601dd7p@chr15:28360793..28360804, -
1.29e-117FFCP PHASE2:Hg19::chr15:28360793..28360804,-#_976af084a4f136a3f79b3f4dad601dd7p@chr15:28360793..28360804, -
1.29e-117FFCP PHASE2:Hg19::chr9:12704666..12704671,+#_976af084a4f136a3f79b3f4dad601dd7p@chr9:12704666..12704671, +
1.29e-117FFCP PHASE2:Hg19::chr17:77923816..77923828,-#_976af084a4f136a3f79b3f4dad601dd7p@chr17:77923816..77923828, -
1.29e-117FFCP PHASE2:Hg19::chr3:69951861..69951868,+#_976af084a4f136a3f79b3f4dad601dd7p@chr3:69951861..69951868, +
1.29e-117FFCP PHASE1:Hg19::chr11:48066945..48066951,+#_976af084a4f136a3f79b3f4dad601dd7p@chr11:48066945..48066951, +
1.29e-117FFCP PHASE1:Hg19::chr1:1497446..1497455,-#_976af084a4f136a3f79b3f4dad601dd7p4@AK129493
1.29e-117FFCP PHASE2:Hg19::chr9:12701691..12701717,+#_976af084a4f136a3f79b3f4dad601dd7p34@TYRP1
1.29e-117FFCP PHASE1:Hg19::chr11:2920857..2920864,+#_976af084a4f136a3f79b3f4dad601dd7p13@SLC22A18
1.29e-117FFCP PHASE2:Hg19::chr15:42694665..42694671,+#_976af084a4f136a3f79b3f4dad601dd7p16@CAPN3
4.33e-107FFCP PHASE1:Hg19::chr22:20878024..20878053,+#_6a1706aa24fbfcf42520a3a64527266bp16@MED15
4.33e-107FFCP PHASE2:Hg19::chr9:12702314..12702344,+#_6a1706aa24fbfcf42520a3a64527266bp@chr9:12702314..12702344, +
4.33e-107FFCP PHASE2:Hg19::chr9:12698593..12698608,+#_6a1706aa24fbfcf42520a3a64527266bp20@TYRP1
4.33e-107FFCP PHASE1:Hg19::chr9:5892516..5892527,+#_6a1706aa24fbfcf42520a3a64527266bp3@MLANA
4.33e-107FFCP PHASE2:Hg19::chr9:12694022..12694033,+#_6a1706aa24fbfcf42520a3a64527266bp15@TYRP1
4.33e-107FFCP PHASE1:Hg19::chr9:12702314..12702344,+#_6a1706aa24fbfcf42520a3a64527266bp@chr9:12702314..12702344, +
4.33e-107FFCP PHASE2:Hg19::chr17:77924675..77924686,-#_6a1706aa24fbfcf42520a3a64527266bp3@TBC1D16
4.33e-107FFCP PHASE2:Hg19::chr9:5892516..5892527,+#_6a1706aa24fbfcf42520a3a64527266bp3@MLANA
4.33e-107FFCP PHASE1:Hg19::chr17:77924675..77924686,-#_6a1706aa24fbfcf42520a3a64527266bp3@TBC1D16
4.33e-107FFCP PHASE2:Hg19::chr9:12702379..12702409,+#_6a1706aa24fbfcf42520a3a64527266bp@chr9:12702379..12702409, +
4.33e-107FFCP PHASE2:Hg19::chr22:20878024..20878053,+#_6a1706aa24fbfcf42520a3a64527266bp16@MED15
4.33e-107FFCP PHASE1:Hg19::chr9:12702379..12702409,+#_6a1706aa24fbfcf42520a3a64527266bp@chr9:12702379..12702409, +
4.33e-107FFCP PHASE1:Hg19::chr9:12698593..12698608,+#_6a1706aa24fbfcf42520a3a64527266bp20@TYRP1
4.33e-107FFCP PHASE1:Hg19::chr9:12694022..12694033,+#_6a1706aa24fbfcf42520a3a64527266bp15@TYRP1
5.07e-107FFCP PHASE2:Hg19::chr9:12695659..12695660,+#_7daa90105e24ba7dea14f999d97c5402p31@TYRP1
5.07e-107FFCP PHASE1:Hg19::chr9:5897549..5897564,+#_7daa90105e24ba7dea14f999d97c5402p4@MLANA

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