CL:0000322
From FANTOM5_SSTAR
Name: | pneumocyte | ||
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Namespace: | FANTOM | ||
Definition: | "An epithelial cell that lines the peripheral gas exchange region of the lungs of air-breathing vertebrates." [GOC:tfm, PMID:20054144] | ||
Xrefs: |
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Synonyms: |
"alveolar epithelial cell" EXACT [] "pneumonocyte" EXACT [] |
Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.
link to ontology dataset
data
Parents
is_a: | CL:0010003(epithelial cell of alveolus of lung) |
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part_of: | UBERON:0004821(pulmonary alveolus epithelium) |
Children
derives from: | FF:0000012 (human alveolar epithelial cell sample),FF:0102060 (bronchioalveolar carcinoma cell sample) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10708-109H6 (alveolar cell carcinoma cell line:SW 1573)
- 10709-109H7 (bronchioalveolar carcinoma cell line:NCI-H358)
- 10715-109I4 (bronchioalveolar carcinoma cell line:NCI-H650)
- 11510-119G7 (Alveolar Epithelial Cells, donor1)
- 11671-122G6 (Alveolar Epithelial Cells, donor3)
Mouse (Mus musculus)
- 10708-109H6 (alveolar cell carcinoma cell line:SW 1573)
- 10709-109H7 (bronchioalveolar carcinoma cell line:NCI-H358)
- 10715-109I4 (bronchioalveolar carcinoma cell line:NCI-H650)
- 11510-119G7 (Alveolar Epithelial Cells, donor1)
- 11671-122G6 (Alveolar Epithelial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000322 (pneumocyte), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
2.39e-66 | FFCP PHASE2:Hg19::chr7:63539651..63539654,+#_59389166674fd1ec6f5fceafb9467669 | p1@ENST00000430271 |
2.39e-66 | FFCP PHASE1:Hg19::chr20:2779199..2779205,-#_59389166674fd1ec6f5fceafb9467669 | p13@CPXM1 |
2.39e-66 | FFCP PHASE1:Hg19::chr10:101691056..101691064,-#_59389166674fd1ec6f5fceafb9467669 | p13@DNMBP |
2.39e-66 | FFCP PHASE2:Hg19::chr17:63511856..63511858,-#_59389166674fd1ec6f5fceafb9467669 | p@chr17:63511856..63511858, - |
2.39e-66 | FFCP PHASE2:Hg19::chr16:11118533..11118538,+#_59389166674fd1ec6f5fceafb9467669 | p12@CLEC16A |
2.39e-66 | FFCP PHASE2:Hg19::chrX:48056224..48056233,-#_59389166674fd1ec6f5fceafb9467669 | p1@SSX5 |
2.39e-66 | FFCP PHASE2:Hg19::chr20:2779236..2779242,-#_59389166674fd1ec6f5fceafb9467669 | p12@CPXM1 |
2.39e-66 | FFCP PHASE1:Hg19::chr20:2779236..2779242,-#_59389166674fd1ec6f5fceafb9467669 | p12@CPXM1 |
2.39e-66 | FFCP PHASE2:Hg19::chr17:13574618..13574636,-#_59389166674fd1ec6f5fceafb9467669 | p@chr17:13574618..13574636, - |
2.39e-66 | FFCP PHASE2:Hg19::chr10:101690855..101690861,-#_59389166674fd1ec6f5fceafb9467669 | p14@DNMBP |
2.39e-66 | FFCP PHASE2:Hg19::chr20:2779313..2779314,-#_59389166674fd1ec6f5fceafb9467669 | p16@CPXM1 |
2.39e-66 | FFCP PHASE2:Hg19::chr14:36536932..36536937,-#_59389166674fd1ec6f5fceafb9467669 | p@chr14:36536932..36536937, - |
2.39e-66 | FFCP PHASE1:Hg19::chr17:63511856..63511858,-#_59389166674fd1ec6f5fceafb9467669 | p@chr17:63511856..63511858, - |
2.39e-66 | FFCP PHASE1:Hg19::chr20:2779313..2779314,-#_59389166674fd1ec6f5fceafb9467669 | p16@CPXM1 |
2.39e-66 | FFCP PHASE1:Hg19::chr17:13574618..13574636,-#_59389166674fd1ec6f5fceafb9467669 | p@chr17:13574618..13574636, - |
2.39e-66 | FFCP PHASE2:Hg19::chr3:87647430..87647437,-#_59389166674fd1ec6f5fceafb9467669 | p@chr3:87647430..87647437, - |
2.39e-66 | FFCP PHASE1:Hg19::chr14:36536932..36536937,-#_59389166674fd1ec6f5fceafb9467669 | -, p@chr14:36536932..36536937 |
2.39e-66 | FFCP PHASE2:Hg19::chr10:101691056..101691064,-#_59389166674fd1ec6f5fceafb9467669 | p13@DNMBP |
2.39e-66 | FFCP PHASE1:Hg19::chr6:137314390..137314394,-#_59389166674fd1ec6f5fceafb9467669 | p1@ENST00000418699, p1@ENST00000432330 |
2.39e-66 | FFCP PHASE1:Hg19::chr3:87647430..87647437,-#_59389166674fd1ec6f5fceafb9467669 | p@chr3:87647430..87647437, - |
2.39e-66 | FFCP PHASE2:Hg19::chr6:137314390..137314394,-#_59389166674fd1ec6f5fceafb9467669 | p1@ENST00000418699, p1@ENST00000432330 |
2.39e-66 | FFCP PHASE2:Hg19::chr20:2779140..2779150,-#_59389166674fd1ec6f5fceafb9467669 | p9@CPXM1 |
2.39e-66 | FFCP PHASE1:Hg19::chr16:11118533..11118538,+#_59389166674fd1ec6f5fceafb9467669 | p12@CLEC16A |
2.39e-66 | FFCP PHASE1:Hg19::chr7:63539651..63539654,+#_59389166674fd1ec6f5fceafb9467669 | p1@ENST00000430271 |
2.39e-66 | FFCP PHASE1:Hg19::chr20:2779140..2779150,-#_59389166674fd1ec6f5fceafb9467669 | p9@CPXM1 |
2.39e-66 | FFCP PHASE1:Hg19::chr10:101690855..101690861,-#_59389166674fd1ec6f5fceafb9467669 | p14@DNMBP |
2.39e-66 | FFCP PHASE1:Hg19::chrX:48056224..48056233,-#_59389166674fd1ec6f5fceafb9467669 | p1@SSX5 |
2.39e-66 | FFCP PHASE2:Hg19::chr20:2779199..2779205,-#_59389166674fd1ec6f5fceafb9467669 | p13@CPXM1 |
1.53e-44 | FFCP PHASE1:Hg19::chr2:191696381..191696384,-#_2ac3a7b13cf35f6209a0a1848f5c1b90 | p@chr2:191696381..191696384, - |
1.53e-44 | FFCP PHASE2:Hg19::chr2:191696381..191696384,-#_2ac3a7b13cf35f6209a0a1848f5c1b90 | p@chr2:191696381..191696384, - |
4.27e-34 | FFCP PHASE2:Hg19::chr10:101691101..101691115,-#_653c956dfff3c4e5645d4f681538a817 | p7@DNMBP |
4.27e-34 | FFCP PHASE2:Hg19::chr9:140350189..140350212,-#_653c956dfff3c4e5645d4f681538a817 | p30@NELF |
4.27e-34 | FFCP PHASE2:Hg19::chr8:122157279..122157284,-#_653c956dfff3c4e5645d4f681538a817 | p@chr8:122157279..122157284, - |
4.27e-34 | FFCP PHASE1:Hg19::chr8:122157279..122157284,-#_653c956dfff3c4e5645d4f681538a817 | -, p@chr8:122157279..122157284 |
4.27e-34 | FFCP PHASE1:Hg19::chrX:147062891..147062896,+#_653c956dfff3c4e5645d4f681538a817 | p3@FMR1NB |
4.27e-34 | FFCP PHASE1:Hg19::chr9:140350189..140350212,-#_653c956dfff3c4e5645d4f681538a817 | p30@NELF |
4.27e-34 | FFCP PHASE2:Hg19::chr11:104005546..104005596,-#_653c956dfff3c4e5645d4f681538a817 | p@chr11:104005546..104005596, - |
4.27e-34 | FFCP PHASE1:Hg19::chr8:94870047..94870056,+#_653c956dfff3c4e5645d4f681538a817 | p30@PDP1 |
4.27e-34 | FFCP PHASE2:Hg19::chr4:169956294..169956301,-#_653c956dfff3c4e5645d4f681538a817 | -, p@chr4:169956294..169956301 |
4.27e-34 | FFCP PHASE1:Hg19::chr11:104005546..104005596,-#_653c956dfff3c4e5645d4f681538a817 | p@chr11:104005546..104005596, - |
4.27e-34 | FFCP PHASE1:Hg19::chr10:101691101..101691115,-#_653c956dfff3c4e5645d4f681538a817 | p7@DNMBP |
4.27e-34 | FFCP PHASE2:Hg19::chr10:101691199..101691208,-#_653c956dfff3c4e5645d4f681538a817 | p11@DNMBP |
4.27e-34 | FFCP PHASE2:Hg19::chr11:41809203..41809208,-#_653c956dfff3c4e5645d4f681538a817 | p@chr11:41809203..41809208, - |
4.27e-34 | FFCP PHASE2:Hg19::chr11:106266838..106266843,+#_653c956dfff3c4e5645d4f681538a817 | p@chr11:106266838..106266843, + |
4.27e-34 | FFCP PHASE1:Hg19::chr11:41809203..41809208,-#_653c956dfff3c4e5645d4f681538a817 | -, p@chr11:41809203..41809208 |
4.27e-34 | FFCP PHASE1:Hg19::chr11:106266838..106266843,+#_653c956dfff3c4e5645d4f681538a817 | +, p@chr11:106266838..106266843 |
4.27e-34 | FFCP PHASE2:Hg19::chrX:147062891..147062896,+#_653c956dfff3c4e5645d4f681538a817 | p3@FMR1NB |
4.27e-34 | FFCP PHASE2:Hg19::chr9:103785643..103785646,-#_653c956dfff3c4e5645d4f681538a817 | p@chr9:103785643..103785646, - |
4.27e-34 | FFCP PHASE1:Hg19::chr9:103785643..103785646,-#_653c956dfff3c4e5645d4f681538a817 | p@chr9:103785643..103785646, - |
4.27e-34 | FFCP PHASE1:Hg19::chr4:169956294..169956301,-#_653c956dfff3c4e5645d4f681538a817 | p@chr4:169956294..169956301, - |
4.27e-34 | FFCP PHASE1:Hg19::chr10:101691199..101691208,-#_653c956dfff3c4e5645d4f681538a817 | p11@DNMBP |
4.27e-34 | FFCP PHASE2:Hg19::chr8:94870047..94870056,+#_653c956dfff3c4e5645d4f681538a817 | p30@PDP1 |
5.96e-34 | FFCP PHASE2:Hg19::chr15:55806847..55806854,-#_498b368fea151929e9c57f42121a7391 | p@chr15:55806847..55806854, - |
5.96e-34 | FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_498b368fea151929e9c57f42121a7391 | p@chr6:45399533..45399540, + |
5.96e-34 | FFCP PHASE1:Hg19::chr6:46985426..46985427,-#_498b368fea151929e9c57f42121a7391 | p@chr6:46985426..46985427, - |
5.96e-34 | FFCP PHASE1:Hg19::chr4:171012844..171012850,-#_498b368fea151929e9c57f42121a7391 | p12@AADAT |
5.96e-34 | FFCP PHASE1:Hg19::chr9:140349915..140349924,-#_498b368fea151929e9c57f42121a7391 | p34@NELF |
5.96e-34 | FFCP PHASE2:Hg19::chr2:118846114..118846125,+#_498b368fea151929e9c57f42121a7391 | p6@INSIG2 |
5.96e-34 | FFCP PHASE1:Hg19::chr15:55806847..55806854,-#_498b368fea151929e9c57f42121a7391 | p@chr15:55806847..55806854, - |
5.96e-34 | FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_498b368fea151929e9c57f42121a7391 | p@chr6:45399263..45399274, + |
5.96e-34 | FFCP PHASE1:Hg19::chr6:169691363..169691375,-#_498b368fea151929e9c57f42121a7391 | p@chr6:169691363..169691375, - |
5.96e-34 | FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_498b368fea151929e9c57f42121a7391 | p@chr6:45399245..45399258, + |
5.96e-34 | FFCP PHASE1:Hg19::chr12:65386452..65386492,-#_498b368fea151929e9c57f42121a7391 | p@chr12:65386452..65386492, - |
5.96e-34 | FFCP PHASE2:Hg19::chr1:93054640..93054674,-#_498b368fea151929e9c57f42121a7391 | p@chr1:93054640..93054674, - |
5.96e-34 | FFCP PHASE2:Hg19::chr6:169691363..169691375,-#_498b368fea151929e9c57f42121a7391 | p@chr6:169691363..169691375, - |
5.96e-34 | FFCP PHASE2:Hg19::chr17:63533845..63533851,-#_498b368fea151929e9c57f42121a7391 | p@chr17:63533845..63533851, - |
5.96e-34 | FFCP PHASE1:Hg19::chr6:141743015..141743025,+#_498b368fea151929e9c57f42121a7391 | p@chr6:141743015..141743025, + |
5.96e-34 | FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_498b368fea151929e9c57f42121a7391 | p@chr6:45399294..45399301, + |
5.96e-34 | FFCP PHASE1:Hg19::chr1:119837700..119837705,+#_498b368fea151929e9c57f42121a7391 | p@chr1:119837700..119837705, + |
5.96e-34 | FFCP PHASE2:Hg19::chr6:141743015..141743025,+#_498b368fea151929e9c57f42121a7391 | p@chr6:141743015..141743025, + |
5.96e-34 | FFCP PHASE1:Hg19::chr1:93054640..93054674,-#_498b368fea151929e9c57f42121a7391 | p@chr1:93054640..93054674, - |
5.96e-34 | FFCP PHASE2:Hg19::chr6:46985426..46985427,-#_498b368fea151929e9c57f42121a7391 | p@chr6:46985426..46985427, - |
5.96e-34 | FFCP PHASE2:Hg19::chr1:119837700..119837705,+#_498b368fea151929e9c57f42121a7391 | p@chr1:119837700..119837705, + |
5.96e-34 | FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_498b368fea151929e9c57f42121a7391 | p@chr6:45399263..45399274, + |
5.96e-34 | FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_498b368fea151929e9c57f42121a7391 | p@chr6:45405332..45405343, + |
5.96e-34 | FFCP PHASE2:Hg19::chr3:139035972..139036016,-#_498b368fea151929e9c57f42121a7391 | p@chr3:139035972..139036016, - |
5.96e-34 | FFCP PHASE1:Hg19::chr2:118846114..118846125,+#_498b368fea151929e9c57f42121a7391 | p6@INSIG2 |
5.96e-34 | FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_498b368fea151929e9c57f42121a7391 | p@chr6:45399294..45399301, + |
5.96e-34 | FFCP PHASE1:Hg19::chr17:63533845..63533851,-#_498b368fea151929e9c57f42121a7391 | p@chr17:63533845..63533851, - |
5.96e-34 | FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_498b368fea151929e9c57f42121a7391 | p@chr6:45405393..45405412, + |
5.96e-34 | FFCP PHASE2:Hg19::chr9:140349856..140349859,-#_498b368fea151929e9c57f42121a7391 | p36@NELF |
5.96e-34 | FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_498b368fea151929e9c57f42121a7391 | p@chr6:45405332..45405343, + |
5.96e-34 | FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_498b368fea151929e9c57f42121a7391 | p@chr6:45399533..45399540, + |
5.96e-34 | FFCP PHASE2:Hg19::chr20:2795718..2795731,+#_498b368fea151929e9c57f42121a7391 | p5@C20orf141 |
5.96e-34 | FFCP PHASE2:Hg19::chr4:171012844..171012850,-#_498b368fea151929e9c57f42121a7391 | p12@AADAT |
5.96e-34 | FFCP PHASE1:Hg19::chr9:140349856..140349859,-#_498b368fea151929e9c57f42121a7391 | p36@NELF |
5.96e-34 | FFCP PHASE1:Hg19::chr3:139035972..139036016,-#_498b368fea151929e9c57f42121a7391 | p@chr3:139035972..139036016, - |
5.96e-34 | FFCP PHASE1:Hg19::chr20:2795718..2795731,+#_498b368fea151929e9c57f42121a7391 | p5@C20orf141 |
5.96e-34 | FFCP PHASE2:Hg19::chr9:140349915..140349924,-#_498b368fea151929e9c57f42121a7391 | p34@NELF |
5.96e-34 | FFCP PHASE2:Hg19::chr12:65386452..65386492,-#_498b368fea151929e9c57f42121a7391 | p@chr12:65386452..65386492, - |
5.96e-34 | FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_498b368fea151929e9c57f42121a7391 | p@chr6:45399245..45399258, + |
5.96e-34 | FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_498b368fea151929e9c57f42121a7391 | +, p@chr6:45405393..45405412 |
1.71e-30 | FFCP PHASE1:Hg19::chr2:75751179..75751194,+#_4fc424dae05ab6940d5f78f415c5796d | p1@BC018659 |
1.71e-30 | FFCP PHASE2:Hg19::chr2:75751179..75751194,+#_4fc424dae05ab6940d5f78f415c5796d | p1@BC018659 |
1.59e-27 | FFCP PHASE1:Hg19::chr14:29047235..29047244,+#_e4c88162f4a531354c5ecac5ef5d2a19 | p@chr14:29047235..29047244, + |
1.59e-27 | FFCP PHASE2:Hg19::chr14:29047235..29047244,+#_e4c88162f4a531354c5ecac5ef5d2a19 | +, p@chr14:29047235..29047244 |
3.56e-27 | FFCP PHASE1:Hg19::chr17:171082..171101,+#_872c612dfb405292136b19d97a453edc | p@chr17:171082..171101, + |
3.56e-27 | FFCP PHASE2:Hg19::chr17:171082..171101,+#_872c612dfb405292136b19d97a453edc | p@chr17:171082..171101, + |
7.93e-25 | FFCP PHASE2:Hg19::chr7:27163592..27163605,-#_9536dad12d75f290d9b26c852d96609f | p@chr7:27163592..27163605, - |
7.93e-25 | FFCP PHASE1:Hg19::chr7:27163592..27163605,-#_9536dad12d75f290d9b26c852d96609f | p@chr7:27163592..27163605, - |