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CL:0000349

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Name:extraembryonic cell
Namespace:FANTOM


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000548(animal cell),CL:0002371(somatic cell)
part_of:UBERON:0000478(extraembryonic structure)



Children


is a:CL:0000351 (trophoblast cell),CL:0002536 (amniotic epithelial cell),CL:0002537 (amnion mesenchymal stem cell),CL:0002541 (chorionic membrane mesenchymal stem cell),CL:0002558 (fibroblast of villous mesenchyme),CL:0002569 (mesenchymal stem cell of umbilical cord),CL:0002577 (placental epithelial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000349 (extraembryonic cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
9.74e-104FFCP PHASE1:Hg19::chr2:237683156..237683171,+#_05da9e064508172b80f903f6456a21f2p@chr2:237683156..237683171, +
9.74e-104FFCP PHASE2:Hg19::chr2:237683156..237683171,+#_05da9e064508172b80f903f6456a21f2p@chr2:237683156..237683171, +
7.02e-103FFCP PHASE1:Hg19::chr19:36592982..36592993,+#_9a3510ce94ff2d775f68b72186fe4687p@chr19:36592982..36592993, +
7.02e-103FFCP PHASE2:Hg19::chr19:36592982..36592993,+#_9a3510ce94ff2d775f68b72186fe4687p@chr19:36592982..36592993, +
6.43e-96FFCP PHASE1:Hg19::chr3:55384975..55384986,-#_f5da4a13ccdb9b0bb734b99b480c80c3p1@ENST00000469806
6.43e-96FFCP PHASE2:Hg19::chr3:55384975..55384986,-#_f5da4a13ccdb9b0bb734b99b480c80c3p1@ENST00000469806
1.62e-93FFCP PHASE2:Hg19::chr20:61287795..61287809,+#_773498266b65f4c0834ebf502a69034dp4@SLCO4A1
1.62e-93FFCP PHASE1:Hg19::chr20:61287795..61287809,+#_773498266b65f4c0834ebf502a69034dp4@SLCO4A1
6.35e-89FFCP PHASE1:Hg19::chr11:8857248..8857269,-#_88c8fdfce8ba731666709ad4cf3860e8p16@ST5
6.35e-89FFCP PHASE2:Hg19::chr11:8857248..8857269,-#_88c8fdfce8ba731666709ad4cf3860e8p16@ST5
6.91e-89FFCP PHASE1:Hg19::chr2:237682954..237682971,+#_55548b3aca4f60d1ab585b3d38504d1dp@chr2:237682954..237682971, +
6.91e-89FFCP PHASE2:Hg19::chr2:237682954..237682971,+#_55548b3aca4f60d1ab585b3d38504d1dp@chr2:237682954..237682971, +
8.17e-89FFCP PHASE2:Hg19::chr2:237682990..237683009,+#_6d941d0ff03bb41988301ce76481f57cp@chr2:237682990..237683009, +
8.17e-89FFCP PHASE1:Hg19::chr2:237682990..237683009,+#_6d941d0ff03bb41988301ce76481f57cp@chr2:237682990..237683009, +
9.66e-89FFCP PHASE1:Hg19::chr11:8857295..8857310,-#_eeae10e9b53df595c84aa41fdbfe0d60p21@ST5
9.66e-89FFCP PHASE2:Hg19::chr11:8857295..8857310,-#_eeae10e9b53df595c84aa41fdbfe0d60p21@ST5
1.58e-86FFCP PHASE1:Mm9::chr17:6988793..6988807,-#_8622738231903069f699a518c38ca6e2p@chr17:6988793..6988807, -
1.58e-86FFCP PHASE2:Mm9::chr11:78698925..78698930,+#_8622738231903069f699a518c38ca6e2p@chr11:78698925..78698930, +
1.58e-86FFCP PHASE1:Mm9::chrX:135868692..135868701,+#_8622738231903069f699a518c38ca6e2p@chrX:135868692..135868701, +
1.58e-86FFCP PHASE2:Mm9::chr16:44262965..44262975,-#_8622738231903069f699a518c38ca6e2p@chr16:44262965..44262975, -
1.58e-86FFCP PHASE2:Mm9::chr9:59378043..59378047,-#_8622738231903069f699a518c38ca6e2p@chr9:59378043..59378047, -
1.58e-86FFCP PHASE1:Mm9::chrX:132804797..132804808,+#_8622738231903069f699a518c38ca6e2p4@Ngfrap1
1.58e-86FFCP PHASE1:Mm9::chr16:66852878..66852880,+#_8622738231903069f699a518c38ca6e2p@chr16:66852878..66852880, +
1.58e-86FFCP PHASE2:Mm9::chr8:44392310..44392319,-#_8622738231903069f699a518c38ca6e2p4@Zfp42
1.58e-86FFCP PHASE2:Mm9::chr14:55557319..55557330,+#_8622738231903069f699a518c38ca6e2p7@Cmtm5
1.58e-86FFCP PHASE1:Mm9::chr8:28338006..28338016,-#_8622738231903069f699a518c38ca6e2p@chr8:28338006..28338016, -
1.58e-86FFCP PHASE1:Mm9::chr3:51025125..51025133,+#_8622738231903069f699a518c38ca6e2p@chr3:51025125..51025133, +
1.58e-86FFCP PHASE1:Mm9::chr12:87810964..87810976,-#_8622738231903069f699a518c38ca6e2p@chr12:87810964..87810976, -
1.58e-86FFCP PHASE1:Mm9::chr16:44262965..44262975,-#_8622738231903069f699a518c38ca6e2p@chr16:44262965..44262975, -
1.58e-86FFCP PHASE1:Mm9::chr7:92689753..92689757,-#_8622738231903069f699a518c38ca6e2p@chr7:92689753..92689757, -
1.58e-86FFCP PHASE1:Mm9::chrX:135868788..135868795,+#_8622738231903069f699a518c38ca6e2p@chrX:135868788..135868795, +
1.58e-86FFCP PHASE2:Mm9::chr11:114739327..114739352,+#_8622738231903069f699a518c38ca6e2p@chr11:114739327..114739352, +
1.58e-86FFCP PHASE2:Mm9::chr4:133574662..133574669,-#_8622738231903069f699a518c38ca6e2p2@Lin28a
1.58e-86FFCP PHASE1:Mm9::chr14:55556656..55556665,+#_8622738231903069f699a518c38ca6e2p@chr14:55556656..55556665, +
1.58e-86FFCP PHASE2:Mm9::chr13:109236868..109236869,+#_8622738231903069f699a518c38ca6e2p@chr13:109236868..109236869, +
1.58e-86FFCP PHASE2:Mm9::chr17:66833174..66833180,-#_8622738231903069f699a518c38ca6e2p@chr17:66833174..66833180, -
1.58e-86FFCP PHASE1:Mm9::chr9:122510273..122510281,+#_8622738231903069f699a518c38ca6e2p@chr9:122510273..122510281, +
1.58e-86FFCP PHASE2:Mm9::chr19:53750863..53750906,+#_8622738231903069f699a518c38ca6e2p@chr19:53750863..53750906, +
1.58e-86FFCP PHASE2:Mm9::chr13:68409910..68409914,+#_8622738231903069f699a518c38ca6e2p@chr13:68409910..68409914, +
1.58e-86FFCP PHASE2:Mm9::chr1:174143295..174143309,-#_8622738231903069f699a518c38ca6e2p@chr1:174143295..174143309, -
1.58e-86FFCP PHASE2:Mm9::chr7:92689753..92689757,-#_8622738231903069f699a518c38ca6e2p@chr7:92689753..92689757, -
1.58e-86FFCP PHASE2:Mm9::chr3:51025125..51025133,+#_8622738231903069f699a518c38ca6e2p@chr3:51025125..51025133, +
1.58e-86FFCP PHASE1:Mm9::chrX:35180221..35180224,+#_8622738231903069f699a518c38ca6e2p1@Rhox6
1.58e-86FFCP PHASE1:Mm9::chr4:133574662..133574669,-#_8622738231903069f699a518c38ca6e2p2@Lin28a
1.58e-86FFCP PHASE1:Mm9::chr19:53750863..53750906,+#_8622738231903069f699a518c38ca6e2p@chr19:53750863..53750906, +
1.58e-86FFCP PHASE1:Mm9::chr8:44265871..44265878,+#_8622738231903069f699a518c38ca6e2p2@Triml2
1.58e-86FFCP PHASE2:Mm9::chr14:55556656..55556665,+#_8622738231903069f699a518c38ca6e2p@chr14:55556656..55556665, +
1.58e-86FFCP PHASE1:Mm9::chr9:59378043..59378047,-#_8622738231903069f699a518c38ca6e2p@chr9:59378043..59378047, -
1.58e-86FFCP PHASE1:Mm9::chr14:55557268..55557274,+#_8622738231903069f699a518c38ca6e2p14@Cmtm5
1.58e-86FFCP PHASE1:Mm9::chrX:22692718..22692721,+#_8622738231903069f699a518c38ca6e2p@chrX:22692718..22692721, +
1.58e-86FFCP PHASE1:Mm9::chr8:44392310..44392319,-#_8622738231903069f699a518c38ca6e2p4@Zfp42
1.58e-86FFCP PHASE2:Mm9::chr9:114472387..114472401,-#_8622738231903069f699a518c38ca6e2p@chr9:114472387..114472401, -
1.58e-86FFCP PHASE2:Mm9::chr4:9880126..9880128,+#_8622738231903069f699a518c38ca6e2p@chr4:9880126..9880128, +
1.58e-86FFCP PHASE2:Mm9::chr8:28338006..28338016,-#_8622738231903069f699a518c38ca6e2p@chr8:28338006..28338016, -
1.58e-86FFCP PHASE2:Mm9::chrX:35180221..35180224,+#_8622738231903069f699a518c38ca6e2p1@Rhox6
1.58e-86FFCP PHASE2:Mm9::chrX:135868692..135868701,+#_8622738231903069f699a518c38ca6e2p@chrX:135868692..135868701, +
1.58e-86FFCP PHASE1:Mm9::chr11:78698925..78698930,+#_8622738231903069f699a518c38ca6e2p@chr11:78698925..78698930, +
1.58e-86FFCP PHASE1:Mm9::chr6:12861081..12861085,+#_8622738231903069f699a518c38ca6e2p@chr6:12861081..12861085, +
1.58e-86FFCP PHASE1:Mm9::chr14:55557459..55557474,+#_8622738231903069f699a518c38ca6e2p6@Cmtm5
1.58e-86FFCP PHASE1:Mm9::chr4:9880126..9880128,+#_8622738231903069f699a518c38ca6e2p@chr4:9880126..9880128, +
1.58e-86FFCP PHASE2:Mm9::chr6:122774653..122774665,+#_8622738231903069f699a518c38ca6e2p@chr6:122774653..122774665, +
1.58e-86FFCP PHASE2:Mm9::chr16:66852878..66852880,+#_8622738231903069f699a518c38ca6e2p@chr16:66852878..66852880, +
1.58e-86FFCP PHASE2:Mm9::chr2:10444938..10444948,+#_8622738231903069f699a518c38ca6e2p@chr2:10444938..10444948, +
1.58e-86FFCP PHASE1:Mm9::chr13:68409910..68409914,+#_8622738231903069f699a518c38ca6e2p@chr13:68409910..68409914, +
1.58e-86FFCP PHASE2:Mm9::chr12:87810964..87810976,-#_8622738231903069f699a518c38ca6e2p@chr12:87810964..87810976, -
1.58e-86FFCP PHASE1:Mm9::chr9:114472387..114472401,-#_8622738231903069f699a518c38ca6e2p@chr9:114472387..114472401, -
1.58e-86FFCP PHASE2:Mm9::chr14:55557268..55557274,+#_8622738231903069f699a518c38ca6e2p14@Cmtm5
1.58e-86FFCP PHASE2:Mm9::chrX:22692718..22692721,+#_8622738231903069f699a518c38ca6e2p@chrX:22692718..22692721, +
1.58e-86FFCP PHASE2:Mm9::chr9:122510273..122510281,+#_8622738231903069f699a518c38ca6e2p@chr9:122510273..122510281, +
1.58e-86FFCP PHASE1:Mm9::chr14:55557307..55557316,+#_8622738231903069f699a518c38ca6e2p11@Cmtm5
1.58e-86FFCP PHASE2:Mm9::chr17:6988793..6988807,-#_8622738231903069f699a518c38ca6e2p@chr17:6988793..6988807, -
1.58e-86FFCP PHASE2:Mm9::chr8:44265871..44265878,+#_8622738231903069f699a518c38ca6e2p2@Triml2
1.58e-86FFCP PHASE1:Mm9::chr17:66833174..66833180,-#_8622738231903069f699a518c38ca6e2p@chr17:66833174..66833180, -
1.58e-86FFCP PHASE1:Mm9::chr1:174143295..174143309,-#_8622738231903069f699a518c38ca6e2p@chr1:174143295..174143309, -
1.58e-86FFCP PHASE2:Mm9::chr14:55557459..55557474,+#_8622738231903069f699a518c38ca6e2p6@Cmtm5
1.58e-86FFCP PHASE2:Mm9::chrX:135868788..135868795,+#_8622738231903069f699a518c38ca6e2p@chrX:135868788..135868795, +
1.58e-86FFCP PHASE1:Mm9::chr13:109236868..109236869,+#_8622738231903069f699a518c38ca6e2p@chr13:109236868..109236869, +
1.58e-86FFCP PHASE2:Mm9::chr6:12861081..12861085,+#_8622738231903069f699a518c38ca6e2p@chr6:12861081..12861085, +
1.58e-86FFCP PHASE1:Mm9::chr6:122774653..122774665,+#_8622738231903069f699a518c38ca6e2p@chr6:122774653..122774665, +
1.58e-86FFCP PHASE1:Mm9::chr11:114739327..114739352,+#_8622738231903069f699a518c38ca6e2p@chr11:114739327..114739352, +
1.58e-86FFCP PHASE2:Mm9::chr14:55557307..55557316,+#_8622738231903069f699a518c38ca6e2p11@Cmtm5
1.58e-86FFCP PHASE1:Mm9::chr2:10444938..10444948,+#_8622738231903069f699a518c38ca6e2p@chr2:10444938..10444948, +
1.58e-86FFCP PHASE1:Mm9::chr14:55557319..55557330,+#_8622738231903069f699a518c38ca6e2p7@Cmtm5
1.58e-86FFCP PHASE2:Mm9::chrX:132804797..132804808,+#_8622738231903069f699a518c38ca6e2p4@Ngfrap1
1.52e-83FFCP PHASE2:Hg19::chr18:6286777..6286797,+#_e19025038b97451fd0b6701e7457beaep@chr18:6286777..6286797, +
1.52e-83FFCP PHASE1:Hg19::chr18:6286777..6286797,+#_e19025038b97451fd0b6701e7457beaep@chr18:6286777..6286797, +
2.66e-83FFCP PHASE2:Hg19::chr11:8857215..8857232,-#_4315d0d53702acc559b251374af8ceddp17@ST5
2.66e-83FFCP PHASE1:Hg19::chr11:8857215..8857232,-#_4315d0d53702acc559b251374af8ceddp17@ST5
1.46e-82FFCP PHASE1:Hg19::chr17:2278441..2278454,+#_c74526a46028465c8379c435ad251da8p13@SGSM2
1.46e-82FFCP PHASE2:Hg19::chr2:237683203..237683210,+#_c74526a46028465c8379c435ad251da8p@chr2:237683203..237683210, +
1.46e-82FFCP PHASE1:Hg19::chr2:237683203..237683210,+#_c74526a46028465c8379c435ad251da8p@chr2:237683203..237683210, +
1.46e-82FFCP PHASE2:Hg19::chr17:2278441..2278454,+#_c74526a46028465c8379c435ad251da8p13@SGSM2
2.53e-79FFCP PHASE1:Hg19::chr11:1946293..1946319,+#_7e505b0fd99dd1f219f4065d09c91b61p11@TNNT3
2.53e-79FFCP PHASE2:Hg19::chr11:1946293..1946319,+#_7e505b0fd99dd1f219f4065d09c91b61p11@TNNT3
6.22e-79FFCP PHASE1:Hg19::chr15:68344995..68345013,+#_adfca23d7045aaf244c3d80b489c8866p@chr15:68344995..68345013, +
6.22e-79FFCP PHASE2:Hg19::chr15:68344995..68345013,+#_adfca23d7045aaf244c3d80b489c8866p@chr15:68344995..68345013, +
3.19e-78FFCP PHASE2:Hg19::chr2:237683212..237683239,+#_7955c79ed778f63b47b942847266a8e2p@chr2:237683212..237683239, +
3.19e-78FFCP PHASE1:Hg19::chr2:237683212..237683239,+#_7955c79ed778f63b47b942847266a8e2p@chr2:237683212..237683239, +
4.83e-76FFCP PHASE2:Hg19::chr6:12161831..12161855,+#_0d840f82e1b45880f65f27a8df52f673p@chr6:12161831..12161855, +
4.83e-76FFCP PHASE1:Hg19::chr6:12161831..12161855,+#_0d840f82e1b45880f65f27a8df52f673p@chr6:12161831..12161855, +