CL:0000708
From FANTOM5_SSTAR
Name: | leptomeningeal cell |
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Namespace: | FANTOM |
Definition: | "Stromal cell that forms the internal covering of the vertebrate brain and produces ECM for this and the choroid plexus." [JB:jb] |
Synonyms: | "leptomemingeal cell" RELATED [] |
Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.
link to ontology dataset
data
Parents
is_a: | CL:0000327(extracellular matrix secreting cell),CL:0002319(neural cell) |
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part_of: | UBERON:0003210(blood-cerebrospinal fluid barrier) |
Children
derives from: | FF:0000091 (human leptomeningeal cell sample),FF:0000111 (mouse leptomeningeal cell sample) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11493-119E8 (Meningeal Cells, donor1)
- 11573-120E7 (Meningeal Cells, donor2)
- 11639-122D1 (Mouse Meningeal cells, donor3)
- 11654-122E7 (Meningeal Cells, donor3)
- 11716-123C6 (Mouse Meningeal cells, donor1)
- 11734-123E6 (Mouse Meningeal cells, donor2)
Mouse (Mus musculus)
- 11493-119E8 (Meningeal Cells, donor1)
- 11573-120E7 (Meningeal Cells, donor2)
- 11639-122D1 (Mouse Meningeal cells, donor3)
- 11654-122E7 (Meningeal Cells, donor3)
- 11716-123C6 (Mouse Meningeal cells, donor1)
- 11734-123E6 (Mouse Meningeal cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000708 (leptomeningeal cell), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
8.98e-131 | FFCP PHASE2:Hg19::chr11:60680237..60680241,+#_032f0744bfd767245554ef4d9a66337b | p@chr11:60680237..60680241, + |
8.98e-131 | FFCP PHASE1:Hg19::chr11:60680237..60680241,+#_032f0744bfd767245554ef4d9a66337b | p@chr11:60680237..60680241, + |
3.48e-118 | FFCP PHASE2:Hg19::chr11:60680219..60680235,+#_85aa0740c0238ed98b02224e2919ecde | p@chr11:60680219..60680235, + |
3.48e-118 | FFCP PHASE1:Hg19::chr11:60680219..60680235,+#_85aa0740c0238ed98b02224e2919ecde | p@chr11:60680219..60680235, + |
5.69e-99 | FFCP PHASE1:Hg19::chr7:107720432..107720443,+#_a0ac1bcfab28fec5d8f654006353d3ca | p@chr7:107720432..107720443, + |
5.69e-99 | FFCP PHASE2:Hg19::chr7:107720432..107720443,+#_a0ac1bcfab28fec5d8f654006353d3ca | p@chr7:107720432..107720443, + |
6.24e-88 | FFCP PHASE1:Hg19::chr5:156811295..156811314,+#_809d425831e08c460f20dc5d2d533888 | p35@CYFIP2 |
6.24e-88 | FFCP PHASE2:Hg19::chr5:156811295..156811314,+#_809d425831e08c460f20dc5d2d533888 | p35@CYFIP2 |
7.51e-74 | FFCP PHASE2:Hg19::chr14:76072096..76072107,+#_9b77a77620f98dcec236bed223246ce5 | p7@FLVCR2 |
7.51e-74 | FFCP PHASE1:Hg19::chr14:76072096..76072107,+#_9b77a77620f98dcec236bed223246ce5 | p7@FLVCR2 |
2.39e-66 | FFCP PHASE1:Hg19::chr11:60680267..60680270,+#_57622a29967bd0ce8c20cc33495fa343 | p@chr11:60680267..60680270, + |
2.39e-66 | FFCP PHASE2:Hg19::chr11:60680267..60680270,+#_57622a29967bd0ce8c20cc33495fa343 | p@chr11:60680267..60680270, + |
1.68e-58 | FFCP PHASE1:Mm9::chr4:88940410..88940415,-#_bd3137813de991fa0c7150d980567e23 | p6@Cdkn2a |
1.68e-58 | FFCP PHASE2:Mm9::chr4:88940410..88940415,-#_bd3137813de991fa0c7150d980567e23 | p6@Cdkn2a |
4.17e-55 | FFCP PHASE1:Hg19::chr15:80843472..80843480,+#_397c3c68319b0f8b4f8824fde9cb26e1 | p22@ARNT2 |
4.17e-55 | FFCP PHASE2:Hg19::chr15:80843472..80843480,+#_397c3c68319b0f8b4f8824fde9cb26e1 | p22@ARNT2 |
1.59e-50 | FFCP PHASE2:Hg19::chr6:45618665..45618676,+#_ecdedff0e4fb00d57b2b27a695f20377 | p@chr6:45618665..45618676, + |
1.59e-50 | FFCP PHASE1:Hg19::chr6:45618665..45618676,+#_ecdedff0e4fb00d57b2b27a695f20377 | p@chr6:45618665..45618676, + |
4.73e-47 | FFCP PHASE2:Hg19::chr15:80842979..80842998,+#_25f4f043b87d3e7dda0a6d3e43884ac8 | p20@ARNT2 |
4.73e-47 | FFCP PHASE1:Hg19::chr15:80842979..80842998,+#_25f4f043b87d3e7dda0a6d3e43884ac8 | p20@ARNT2 |
7.81e-45 | FFCP PHASE1:Hg19::chr3:146517344..146517356,+#_61e9a9dc8235c84d805fb7554ffda8b0 | p@chr3:146517344..146517356, + |
7.81e-45 | FFCP PHASE2:Hg19::chr3:146517344..146517356,+#_61e9a9dc8235c84d805fb7554ffda8b0 | p@chr3:146517344..146517356, + |
2.97e-44 | FFCP PHASE1:Hg19::chr5:92498209..92498218,-#_0a1e1ba3e72766bad5725c3a6326d910 | p@chr5:92498209..92498218, - |
2.97e-44 | FFCP PHASE2:Hg19::chr5:92498209..92498218,-#_0a1e1ba3e72766bad5725c3a6326d910 | p@chr5:92498209..92498218, - |
7.52e-44 | FFCP PHASE1:Mm9::chr4:138749194..138749201,+#_01e82a950d45bb2928147c7e0724be32 | p@chr4:138749194..138749201, + |
7.52e-44 | FFCP PHASE2:Mm9::chr4:138749194..138749201,+#_01e82a950d45bb2928147c7e0724be32 | p@chr4:138749194..138749201, + |
1.24e-43 | FFCP PHASE1:Mm9::chr7:4729743..4729746,-#_a174604cbd3e9c2798493016bda2fce7 | p1@Il11 |
1.24e-43 | FFCP PHASE2:Mm9::chr7:4729743..4729746,-#_a174604cbd3e9c2798493016bda2fce7 | p1@Il11 |
1.14e-40 | FFCP PHASE2:Hg19::chr2:202562749..202562760,-#_0c951442dd18f2288158e45f512f8495 | p7@MPP4 |
1.14e-40 | FFCP PHASE1:Hg19::chr2:202562749..202562760,-#_0c951442dd18f2288158e45f512f8495 | p7@MPP4 |
6.35e-36 | FFCP PHASE2:Mm9::chr11:100820213..100820220,-#_ebae4b7c84f6e9b36ce4dc591e830b1c | p@chr11:100820213..100820220, - |
6.35e-36 | FFCP PHASE1:Mm9::chr11:100820213..100820220,-#_ebae4b7c84f6e9b36ce4dc591e830b1c | p@chr11:100820213..100820220, - |
7.74e-36 | FFCP PHASE1:Hg19::chr17:1013251..1013277,-#_e5e6ded3e985367f814a698501a5de05 | p@chr17:1013251..1013277, - |
7.74e-36 | FFCP PHASE2:Hg19::chr17:1013251..1013277,-#_e5e6ded3e985367f814a698501a5de05 | p@chr17:1013251..1013277, - |
1.24e-35 | FFCP PHASE1:Hg19::chr6:158490457..158490470,+#_e9b914e8743e996bd5498a6420210cb7 | p10@SYNJ2 |
1.24e-35 | FFCP PHASE2:Hg19::chr6:158490457..158490470,+#_e9b914e8743e996bd5498a6420210cb7 | p10@SYNJ2 |
2.13e-35 | FFCP PHASE2:Mm9::chr11:117093260..117093293,+#_522d8dc80eba2d73ebf1dba811e8db79 | p34@Sept9 |
2.13e-35 | FFCP PHASE1:Mm9::chr11:117093260..117093293,+#_522d8dc80eba2d73ebf1dba811e8db79 | p34@Sept9 |
2.25e-35 | FFCP PHASE2:Hg19::chr3:147088197..147088208,-#_88e4a76e374fe43d743bc9a650d75cef | p@chr3:147088197..147088208, - |
2.25e-35 | FFCP PHASE1:Hg19::chr3:147088197..147088208,-#_88e4a76e374fe43d743bc9a650d75cef | p@chr3:147088197..147088208, - |
2.45e-34 | FFCP PHASE2:Hg19::chr7:140341251..140341265,-#_edad83fa2abcca54f5ade4ad925467a5 | p3@DENND2A |
2.45e-34 | FFCP PHASE1:Hg19::chr7:140341251..140341265,-#_edad83fa2abcca54f5ade4ad925467a5 | p3@DENND2A |
1.09e-30 | FFCP PHASE2:Hg19::chr11:60680190..60680212,+#_c874e68921e70150e950c1b7b22bcb15 | p@chr11:60680190..60680212, + |
1.09e-30 | FFCP PHASE1:Hg19::chr11:60680190..60680212,+#_c874e68921e70150e950c1b7b22bcb15 | p@chr11:60680190..60680212, + |
4.77e-30 | FFCP PHASE1:Mm9::chr19:54120233..54120243,+#_80d3cb42f64a42434988de468e67625a | p4@Adra2a |
4.77e-30 | FFCP PHASE2:Mm9::chr19:54120233..54120243,+#_80d3cb42f64a42434988de468e67625a | p4@Adra2a |
4.77e-30 | FFCP PHASE2:Mm9::chr2:119000878..119000908,-#_80d3cb42f64a42434988de468e67625a | p@chr2:119000878..119000908, - |
4.77e-30 | FFCP PHASE1:Mm9::chr2:119000878..119000908,-#_80d3cb42f64a42434988de468e67625a | p@chr2:119000878..119000908, - |
5.61e-30 | FFCP PHASE2:Hg19::chr17:48346424..48346435,+#_c74484cfa45e8d0d303ad8408d84e1ae | p@chr17:48346424..48346435, + |
5.61e-30 | FFCP PHASE1:Hg19::chr17:48346424..48346435,+#_c74484cfa45e8d0d303ad8408d84e1ae | p@chr17:48346424..48346435, + |
7.41e-26 | FFCP PHASE1:Hg19::chrX:136649632..136649652,+#_7ee0f6e24b007044ae7fb2186e94cdb3 | p@chrX:136649632..136649652, + |
7.41e-26 | FFCP PHASE2:Hg19::chrX:136649632..136649652,+#_7ee0f6e24b007044ae7fb2186e94cdb3 | p@chrX:136649632..136649652, + |
1.35e-25 | FFCP PHASE1:Mm9::chr19:54120078..54120093,+#_06cbffd1ac2556bbf03dfe1feaf4a470 | p6@Adra2a |
1.35e-25 | FFCP PHASE2:Mm9::chr19:54120078..54120093,+#_06cbffd1ac2556bbf03dfe1feaf4a470 | p6@Adra2a |
1.35e-25 | FFCP PHASE2:Mm9::chr5:28144366..28144367,-#_06cbffd1ac2556bbf03dfe1feaf4a470 | p@chr5:28144366..28144367, - |
1.35e-25 | FFCP PHASE1:Mm9::chr5:28144366..28144367,-#_06cbffd1ac2556bbf03dfe1feaf4a470 | p@chr5:28144366..28144367, - |
2.99e-25 | FFCP PHASE2:Hg19::chr2:202562763..202562772,-#_a590ccb2c8c18a334795107df285cd8d | p8@MPP4 |
2.99e-25 | FFCP PHASE1:Hg19::chr2:202562763..202562772,-#_a590ccb2c8c18a334795107df285cd8d | p8@MPP4 |
4.87e-25 | FFCP PHASE1:Hg19::chr14:61654271..61654282,+#_ecd29fceac3393b5f79de45eae556157 | p30@PRKCH |
4.87e-25 | FFCP PHASE2:Hg19::chr14:61654271..61654282,+#_ecd29fceac3393b5f79de45eae556157 | p30@PRKCH |
8.75e-25 | FFCP PHASE2:Hg19::chr3:147130332..147130352,+#_3a5cf7f78f81aa5207a6960a3691a938 | p@chr3:147130332..147130352, + |
8.75e-25 | FFCP PHASE1:Hg19::chr3:147130332..147130352,+#_3a5cf7f78f81aa5207a6960a3691a938 | p@chr3:147130332..147130352, + |
1.03e-24 | FFCP PHASE2:Hg19::chr3:147114260..147114290,-#_2cf14a7cfeb9c530708f20dcbf7636cb | p3@ZIC4 |
1.03e-24 | FFCP PHASE1:Hg19::chr3:147114260..147114290,-#_2cf14a7cfeb9c530708f20dcbf7636cb | p3@ZIC4 |
9.24e-24 | FFCP PHASE2:Hg19::chr3:147131185..147131202,+#_bcd2111a84b09c58cf6f6aafd3bd4a25 | +, p@chr3:147131185..147131202 |
9.24e-24 | FFCP PHASE1:Hg19::chr3:147131185..147131202,+#_bcd2111a84b09c58cf6f6aafd3bd4a25 | p@chr3:147131185..147131202, + |
2.62e-23 | FFCP PHASE2:Hg19::chr10:74020629..74020634,-#_e91253e9e5bf705f888e4016b4abe078 | p@chr10:74020629..74020634, - |
2.62e-23 | FFCP PHASE1:Hg19::chr10:74020629..74020634,-#_e91253e9e5bf705f888e4016b4abe078 | p@chr10:74020629..74020634, - |
3.06e-23 | FFCP PHASE2:Mm9::chr5:136364908..136364912,+#_7538f03f4e9ac777ceb09b7e6d75f2de | p@chr5:136364908..136364912, + |
3.06e-23 | FFCP PHASE1:Mm9::chr5:136364908..136364912,+#_7538f03f4e9ac777ceb09b7e6d75f2de | p@chr5:136364908..136364912, + |
3.27e-23 | FFCP PHASE1:Hg19::chr2:202562827..202562835,-#_b9f3c24a6f30090773323a0058890b1b | p10@MPP4 |
3.27e-23 | FFCP PHASE2:Hg19::chr3:147128275..147128285,+#_b9f3c24a6f30090773323a0058890b1b | p5@AB464362 |
3.27e-23 | FFCP PHASE1:Hg19::chr3:147128275..147128285,+#_b9f3c24a6f30090773323a0058890b1b | p5@AB464362 |
3.27e-23 | FFCP PHASE2:Hg19::chr2:202562827..202562835,-#_b9f3c24a6f30090773323a0058890b1b | p10@MPP4 |
4.61e-23 | FFCP PHASE2:Hg19::chr10:69902750..69902779,+#_3997d6e35be6a1a99383bb2333f5921a | p@chr10:69902750..69902779, + |
4.61e-23 | FFCP PHASE1:Hg19::chr10:69902750..69902779,+#_3997d6e35be6a1a99383bb2333f5921a | p@chr10:69902750..69902779, + |
5.15e-23 | FFCP PHASE1:Hg19::chr12:108732917..108732935,-#_47b88df22beb157685ec6f71b37fc87d | p5@CMKLR1 |
5.15e-23 | FFCP PHASE2:Hg19::chr12:108732917..108732935,-#_47b88df22beb157685ec6f71b37fc87d | p5@CMKLR1 |
6.44e-23 | FFCP PHASE2:Hg19::chr3:147123837..147123848,-#_18d68e8149ff47707ff7b31779334988 | p7@ZIC4 |
6.44e-23 | FFCP PHASE1:Hg19::chr3:147123837..147123848,-#_18d68e8149ff47707ff7b31779334988 | p7@ZIC4 |
9.5e-23 | FFCP PHASE2:Mm9::chr17:45832371..45832382,+#_d466990909db5a38ecd5cf321fe48659 | p4@Mrpl14 |
9.5e-23 | FFCP PHASE1:Mm9::chr17:45832371..45832382,+#_d466990909db5a38ecd5cf321fe48659 | p4@Mrpl14 |
9.47e-22 | FFCP PHASE1:Hg19::chr20:2781623..2781635,-#_620139219beefd9d9502b682fdc86d4f | p5@CPXM1 |
9.47e-22 | FFCP PHASE2:Hg19::chr20:2781623..2781635,-#_620139219beefd9d9502b682fdc86d4f | p5@CPXM1 |
3.63e-21 | FFCP PHASE2:Hg19::chr10:112207187..112207199,-#_2228fb420243b3a626d1dcd1dc1bef8e | p@chr10:112207187..112207199, - |
3.63e-21 | FFCP PHASE1:Hg19::chr10:112207187..112207199,-#_2228fb420243b3a626d1dcd1dc1bef8e | p@chr10:112207187..112207199, - |
6.43e-21 | FFCP PHASE1:Mm9::chr19:10067446..10067483,-#_07c300917cd07218c3845571d48d98ca | p5@Best1, p5@LOC100504840 |
6.43e-21 | FFCP PHASE2:Mm9::chr19:10067446..10067483,-#_07c300917cd07218c3845571d48d98ca | p5@Best1, p5@LOC100504840 |
8.07e-21 | FFCP PHASE2:Mm9::chr2:35140218..35140229,+#_dd1076180b3cbe5f2138cb61d3d59f2b | p@chr2:35140218..35140229, + |
8.07e-21 | FFCP PHASE1:Mm9::chr2:35140218..35140229,+#_dd1076180b3cbe5f2138cb61d3d59f2b | p@chr2:35140218..35140229, + |
8.47e-21 | FFCP PHASE1:Hg19::chr6:151562148..151562162,+#_88085b522dda6d8c84817ad2a6ee700f | p@chr6:151562148..151562162, + |
8.47e-21 | FFCP PHASE2:Hg19::chr6:151562148..151562162,+#_88085b522dda6d8c84817ad2a6ee700f | p@chr6:151562148..151562162, + |
1.74e-20 | FFCP PHASE1:Hg19::chr3:147127489..147127503,+#_5c4866ad7944a9ddeb10104191664317 | p11@ZIC1 |
1.74e-20 | FFCP PHASE2:Hg19::chr3:147127489..147127503,+#_5c4866ad7944a9ddeb10104191664317 | p11@ZIC1 |
2.05e-20 | FFCP PHASE2:Hg19::chr9:6565462..6565475,-#_7208227c69955c7978f3d90905dbc631 | p5@GLDC |
2.05e-20 | FFCP PHASE1:Hg19::chr9:6565462..6565475,-#_7208227c69955c7978f3d90905dbc631 | p5@GLDC |
3.01e-20 | FFCP PHASE1:Hg19::chr3:147131775..147131783,+#_78fd5b4a11f9be5a7b87e58683bc3348 | p@chr3:147131775..147131783, + |
3.01e-20 | FFCP PHASE2:Hg19::chr3:147131775..147131783,+#_78fd5b4a11f9be5a7b87e58683bc3348 | p@chr3:147131775..147131783, + |
3.91e-20 | FFCP PHASE1:Mm9::chr11:86449013..86449037,-#_87c684b42bc23b76caebc69c12e40fc6 | p@chr11:86449013..86449037, - |
3.91e-20 | FFCP PHASE2:Mm9::chr11:86449013..86449037,-#_87c684b42bc23b76caebc69c12e40fc6 | p@chr11:86449013..86449037, - |