CL:0000784
From FANTOM5_SSTAR
Name: | plasmacytoid dendritic cell | ||
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Namespace: | FANTOM | ||
Definition: | "A dendritic cell type of distinct morphology, localization, and surface marker expression (CD123-positive) from other dendritic cell types and associated with early stage immune responses, particularly the release of physiologically abundant amounts of type I interferons in response to infection." [GOC:add, GOC:dsd, PMCID:PMC2118448, PMCID:PMC538703, PMID:15549123, PMID:17332250, PMID:17850486, PMID:20304825] | ||
Xrefs: |
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Synonyms: |
"DC2" EXACT [] "interferon-producing cell" EXACT [] "IPC" EXACT [] "lymphoid dendritic cell" EXACT [] "pDC" EXACT [] "plasmacytoid monocyte" EXACT [] "plasmacytoid T cell" EXACT [] "T-associated plasma cell" EXACT [] "type 2 DC" EXACT [] |
Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.
link to ontology dataset
data
Parents
is_a: | CL:0000451(dendritic cell) |
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develops_from: | CL:0000037(hematopoietic stem cell) |
Children
derives from: | FF:0000045 (human plasmacytoid dendritic cell sample) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11228-116C4 (Dendritic Cells - plasmacytoid, donor1)
- 11309-117C4 (Dendritic Cells - plasmacytoid, donor2)
- 11385-118B8 (Dendritic Cells - plasmacytoid, donor3)
Mouse (Mus musculus)
- 11228-116C4 (Dendritic Cells - plasmacytoid, donor1)
- 11309-117C4 (Dendritic Cells - plasmacytoid, donor2)
- 11385-118B8 (Dendritic Cells - plasmacytoid, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000784 (plasmacytoid dendritic cell), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
2.79e-195 | FFCP PHASE1:Hg19::chr15:75304015..75304027,+#_9025b5fd6d22363ef6114b7a2102de6e | p14@SCAMP5 |
2.79e-195 | FFCP PHASE2:Hg19::chr21:43723219..43723257,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr21:43723219..43723257, - |
2.79e-195 | FFCP PHASE2:Hg19::chr18:42136420..42136431,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr18:42136420..42136431, - |
2.79e-195 | FFCP PHASE2:Hg19::chr15:75304015..75304027,+#_9025b5fd6d22363ef6114b7a2102de6e | p14@SCAMP5 |
2.79e-195 | FFCP PHASE1:Hg19::chr20:23029606..23029614,-#_9025b5fd6d22363ef6114b7a2102de6e | p17@THBD |
2.79e-195 | FFCP PHASE2:Hg19::chr3:46077062..46077087,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr3:46077062..46077087, + |
2.79e-195 | FFCP PHASE1:Hg19::chr19:56623811..56623815,-#_9025b5fd6d22363ef6114b7a2102de6e | -, p@chr19:56623811..56623815 |
2.79e-195 | FFCP PHASE2:Hg19::chr5:43519263..43519271,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr5:43519263..43519271, + |
2.79e-195 | FFCP PHASE2:Hg19::chr12:132541629..132541634,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr12:132541629..132541634, - |
2.79e-195 | FFCP PHASE2:Hg19::chrX:22056377..22056388,+#_9025b5fd6d22363ef6114b7a2102de6e | p4@PHEX |
2.79e-195 | FFCP PHASE1:Hg19::chr9:94935693..94935702,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr9:94935693..94935702, - |
2.79e-195 | FFCP PHASE2:Hg19::chr6:342279..342288,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr6:342279..342288, + |
2.79e-195 | FFCP PHASE1:Hg19::chr18:42134920..42134924,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr18:42134920..42134924, - |
2.79e-195 | FFCP PHASE1:Hg19::chr20:23029956..23029963,+#_9025b5fd6d22363ef6114b7a2102de6e | +, p@chr20:23029956..23029963 |
2.79e-195 | FFCP PHASE1:Hg19::chr16:56903804..56903818,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr16:56903804..56903818, + |
2.79e-195 | FFCP PHASE1:Hg19::chr19:5338459..5338468,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr19:5338459..5338468, - |
2.79e-195 | FFCP PHASE1:Hg19::chr1:53834681..53834688,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr1:53834681..53834688, - |
2.79e-195 | FFCP PHASE1:Hg19::chrX:22056377..22056388,+#_9025b5fd6d22363ef6114b7a2102de6e | p4@PHEX |
2.79e-195 | FFCP PHASE1:Hg19::chr11:628252..628271,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr11:628252..628271, - |
2.79e-195 | FFCP PHASE2:Hg19::chr12:7902131..7902142,-#_9025b5fd6d22363ef6114b7a2102de6e | p4@CLEC4C |
2.79e-195 | FFCP PHASE2:Hg19::chr17:16892517..16892527,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr17:16892517..16892527, - |
2.79e-195 | FFCP PHASE2:Hg19::chr21:45602458..45602471,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr21:45602458..45602471, + |
2.79e-195 | FFCP PHASE2:Hg19::chr1:66169696..66169704,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr1:66169696..66169704, + |
2.79e-195 | FFCP PHASE2:Hg19::chr20:42340062..42340071,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr20:42340062..42340071, + |
2.79e-195 | FFCP PHASE1:Hg19::chr17:40134422..40134444,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr17:40134422..40134444, - |
2.79e-195 | FFCP PHASE2:Hg19::chr1:53834714..53834761,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr1:53834714..53834761, - |
2.79e-195 | FFCP PHASE1:Hg19::chr15:75304053..75304061,+#_9025b5fd6d22363ef6114b7a2102de6e | p26@SCAMP5 |
2.79e-195 | FFCP PHASE1:Hg19::chr1:66169696..66169704,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr1:66169696..66169704, + |
2.79e-195 | FFCP PHASE1:Hg19::chr6:35026759..35026770,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr6:35026759..35026770, - |
2.79e-195 | FFCP PHASE2:Hg19::chr15:75304053..75304061,+#_9025b5fd6d22363ef6114b7a2102de6e | p26@SCAMP5 |
2.79e-195 | FFCP PHASE1:Hg19::chr16:2737269..2737281,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr16:2737269..2737281, - |
2.79e-195 | FFCP PHASE2:Hg19::chr8:135614204..135614209,-#_9025b5fd6d22363ef6114b7a2102de6e | p22@ZFAT |
2.79e-195 | FFCP PHASE2:Hg19::chr6:35026759..35026770,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr6:35026759..35026770, - |
2.79e-195 | FFCP PHASE2:Hg19::chr19:5338459..5338468,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr19:5338459..5338468, - |
2.79e-195 | FFCP PHASE1:Hg19::chr7:101821643..101821681,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr7:101821643..101821681, + |
2.79e-195 | FFCP PHASE2:Hg19::chr11:629346..629350,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr11:629346..629350, - |
2.79e-195 | FFCP PHASE2:Hg19::chr2:60639343..60639352,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr2:60639343..60639352, - |
2.79e-195 | FFCP PHASE2:Hg19::chrX:22056423..22056428,+#_9025b5fd6d22363ef6114b7a2102de6e | p13@PHEX |
2.79e-195 | FFCP PHASE1:Hg19::chr9:94935773..94935787,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr9:94935773..94935787, - |
2.79e-195 | FFCP PHASE1:Hg19::chr2:99181476..99181492,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr2:99181476..99181492, + |
2.79e-195 | FFCP PHASE1:Hg19::chr16:56904102..56904111,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr16:56904102..56904111, + |
2.79e-195 | FFCP PHASE1:Hg19::chr1:53834714..53834761,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr1:53834714..53834761, - |
2.79e-195 | FFCP PHASE1:Hg19::chrX:22056423..22056428,+#_9025b5fd6d22363ef6114b7a2102de6e | p13@PHEX |
2.79e-195 | FFCP PHASE1:Hg19::chr6:342279..342288,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr6:342279..342288, + |
2.79e-195 | FFCP PHASE2:Hg19::chr2:153415904..153415907,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr2:153415904..153415907, + |
2.79e-195 | FFCP PHASE1:Hg19::chr3:50365569..50365570,-#_9025b5fd6d22363ef6114b7a2102de6e | p3@TUSC2 |
2.79e-195 | FFCP PHASE2:Hg19::chr10:103662491..103662497,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr10:103662491..103662497, + |
2.79e-195 | FFCP PHASE1:Hg19::chr12:111537227..111537239,+#_9025b5fd6d22363ef6114b7a2102de6e | p7@CUX2 |
2.79e-195 | FFCP PHASE2:Hg19::chr12:111537227..111537239,+#_9025b5fd6d22363ef6114b7a2102de6e | p7@CUX2 |
2.79e-195 | FFCP PHASE1:Hg19::chr12:7902131..7902142,-#_9025b5fd6d22363ef6114b7a2102de6e | p4@CLEC4C |
2.79e-195 | FFCP PHASE1:Hg19::chr4:8200756..8200765,+#_9025b5fd6d22363ef6114b7a2102de6e | p17@SH3TC1 |
2.79e-195 | FFCP PHASE1:Hg19::chr20:23211928..23211934,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr20:23211928..23211934, + |
2.79e-195 | FFCP PHASE2:Hg19::chr20:23211928..23211934,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr20:23211928..23211934, + |
2.79e-195 | FFCP PHASE2:Hg19::chr17:55950784..55950789,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr17:55950784..55950789, - |
2.79e-195 | FFCP PHASE1:Hg19::chr21:45602441..45602448,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr21:45602441..45602448, + |
2.79e-195 | FFCP PHASE2:Hg19::chr2:99181476..99181492,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr2:99181476..99181492, + |
2.79e-195 | FFCP PHASE1:Hg19::chr19:5336483..5336493,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr19:5336483..5336493, + |
2.79e-195 | FFCP PHASE2:Hg19::chr17:27065136..27065144,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr17:27065136..27065144, + |
2.79e-195 | FFCP PHASE2:Hg19::chr7:101821643..101821681,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr7:101821643..101821681, + |
2.79e-195 | FFCP PHASE1:Hg19::chr12:133349385..133349413,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr12:133349385..133349413, + |
2.79e-195 | FFCP PHASE1:Hg19::chr7:4784283..4784288,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr7:4784283..4784288, - |
2.79e-195 | FFCP PHASE1:Hg19::chr2:60639343..60639352,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr2:60639343..60639352, - |
2.79e-195 | FFCP PHASE2:Hg19::chrX:22056435..22056446,+#_9025b5fd6d22363ef6114b7a2102de6e | p3@PHEX |
2.79e-195 | FFCP PHASE2:Hg19::chr16:2737269..2737281,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr16:2737269..2737281, - |
2.79e-195 | FFCP PHASE1:Hg19::chr18:42136420..42136431,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr18:42136420..42136431, - |
2.79e-195 | FFCP PHASE2:Hg19::chr10:72253384..72253425,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr10:72253384..72253425, + |
2.79e-195 | FFCP PHASE1:Hg19::chrX:22056435..22056446,+#_9025b5fd6d22363ef6114b7a2102de6e | p3@PHEX |
2.79e-195 | FFCP PHASE1:Hg19::chr11:629346..629350,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr11:629346..629350, - |
2.79e-195 | FFCP PHASE1:Hg19::chr10:103662491..103662497,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr10:103662491..103662497, + |
2.79e-195 | FFCP PHASE2:Hg19::chr18:42134920..42134924,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr18:42134920..42134924, - |
2.79e-195 | FFCP PHASE1:Hg19::chr3:46077062..46077087,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr3:46077062..46077087, + |
2.79e-195 | FFCP PHASE2:Hg19::chr7:4784283..4784288,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr7:4784283..4784288, - |
2.79e-195 | FFCP PHASE2:Hg19::chr9:94935693..94935702,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr9:94935693..94935702, - |
2.79e-195 | FFCP PHASE1:Hg19::chr10:72253384..72253425,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr10:72253384..72253425, + |
2.79e-195 | FFCP PHASE1:Hg19::chr8:135614204..135614209,-#_9025b5fd6d22363ef6114b7a2102de6e | p22@ZFAT |
2.79e-195 | FFCP PHASE1:Hg19::chr15:72209237..72209246,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr15:72209237..72209246, - |
2.79e-195 | FFCP PHASE2:Hg19::chr16:56903804..56903818,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr16:56903804..56903818, + |
2.79e-195 | FFCP PHASE2:Hg19::chr19:5336483..5336493,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr19:5336483..5336493, + |
2.79e-195 | FFCP PHASE2:Hg19::chr4:8200756..8200765,+#_9025b5fd6d22363ef6114b7a2102de6e | p17@SH3TC1 |
2.79e-195 | FFCP PHASE1:Hg19::chr2:99158646..99158653,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr2:99158646..99158653, + |
2.79e-195 | FFCP PHASE1:Hg19::chr5:1799180..1799192,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr5:1799180..1799192, + |
2.79e-195 | FFCP PHASE1:Hg19::chr21:45602458..45602471,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr21:45602458..45602471, + |
2.79e-195 | FFCP PHASE2:Hg19::chr5:1799180..1799192,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr5:1799180..1799192, + |
2.79e-195 | FFCP PHASE2:Hg19::chr3:50365569..50365570,-#_9025b5fd6d22363ef6114b7a2102de6e | p3@TUSC2 |
2.79e-195 | FFCP PHASE1:Hg19::chr12:77160173..77160180,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr12:77160173..77160180, + |
2.79e-195 | FFCP PHASE1:Hg19::chr5:43519263..43519271,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr5:43519263..43519271, + |
2.79e-195 | FFCP PHASE1:Hg19::chr12:132541629..132541634,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr12:132541629..132541634, - |
2.79e-195 | FFCP PHASE2:Hg19::chr17:40134422..40134444,-#_9025b5fd6d22363ef6114b7a2102de6e | -, p@chr17:40134422..40134444 |
2.79e-195 | FFCP PHASE1:Hg19::chr2:153415904..153415907,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr2:153415904..153415907, + |
2.79e-195 | FFCP PHASE2:Hg19::chr20:23029606..23029614,-#_9025b5fd6d22363ef6114b7a2102de6e | p17@THBD |
2.79e-195 | FFCP PHASE2:Hg19::chr2:220466151..220466157,+#_9025b5fd6d22363ef6114b7a2102de6e | p11@STK11IP |
2.79e-195 | FFCP PHASE2:Hg19::chr12:133349385..133349413,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr12:133349385..133349413, + |
2.79e-195 | FFCP PHASE2:Hg19::chr2:99158646..99158653,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr2:99158646..99158653, + |
2.79e-195 | FFCP PHASE2:Hg19::chr13:60902553..60902562,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr13:60902553..60902562, + |
2.79e-195 | FFCP PHASE2:Hg19::chr9:94935773..94935787,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr9:94935773..94935787, - |
2.79e-195 | FFCP PHASE1:Hg19::chr2:220466151..220466157,+#_9025b5fd6d22363ef6114b7a2102de6e | p11@STK11IP |
2.79e-195 | FFCP PHASE2:Hg19::chr12:77160173..77160180,+#_9025b5fd6d22363ef6114b7a2102de6e | p@chr12:77160173..77160180, + |
2.79e-195 | FFCP PHASE2:Hg19::chr19:56623811..56623815,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr19:56623811..56623815, - |
2.79e-195 | FFCP PHASE1:Hg19::chr17:55950784..55950789,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr17:55950784..55950789, - |
2.79e-195 | FFCP PHASE1:Hg19::chr6:47445214..47445218,-#_9025b5fd6d22363ef6114b7a2102de6e | p@chr6:47445214..47445218, - |