CL:0000955

Name:	pre-B-II cell
Namespace:	FANTOM
Definition:	"A pre-B-II cell is a precursor B cell that expresses immunoglobulin mu heavy chain (IgHmu+), and lack expression of CD34, TdT, immunoglobulin kappa light chain and immunoglobulin lambda light chain." [GO_REF:0000031, GOC:rhs, GOC:tfm, PMID:9785673]
Xrefs:	Expandlinks: BTO:0001133
Synonyms:	"pre-B-lymphocyte" EXACT []

Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	CL:0000817(precursor B cell)
develops_from:	CL:0000826(pro-B cell)

Children

is a:	CL:0000954 (small pre-B-II cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

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Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000955 (pre-B-II cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
1.55e-98	FFCP PHASE2:Hg19::chr5:88646759..88646764,+	p@chr5:88646759..88646764, +
1.55e-98	FFCP PHASE1:Hg19::chr6:164466345..164466352,+	p@chr6:164466345..164466352, +
1.55e-98	FFCP PHASE1:Hg19::chr1:101853882..101853891,-	p@chr1:101853882..101853891, -
1.55e-98	FFCP PHASE1:Hg19::chr4:176353908..176353917,-	p@chr4:176353908..176353917, -
1.55e-98	FFCP PHASE2:Hg19::chr21:20867728..20867731,-	p@chr21:20867728..20867731, -
1.55e-98	FFCP PHASE2:Hg19::chr12:40953942..40953946,+	p@chr12:40953942..40953946, +
1.55e-98	FFCP PHASE1:Hg19::chr11:26122006..26122011,-	p@chr11:26122006..26122011, -
1.55e-98	FFCP PHASE2:Hg19::chr1:17349613..17349631,-	p8@SDHB
1.55e-98	FFCP PHASE1:Hg19::chr8:128270027..128270033,-	p@chr8:128270027..128270033, -
1.55e-98	FFCP PHASE2:Hg19::chr2:77746703..77746711,-	p9@LRRTM4
1.55e-98	FFCP PHASE1:Hg19::chr12:4313331..4313334,+	p@chr12:4313331..4313334, +
1.55e-98	FFCP PHASE1:Hg19::chr6:166581265..166581274,-	p5@T
1.55e-98	FFCP PHASE2:Hg19::chr3:168337915..168337930,-	p@chr3:168337915..168337930, -
1.55e-98	FFCP PHASE1:Hg19::chr7:86415255..86415288,+	p@chr7:86415255..86415288, +
1.55e-98	FFCP PHASE2:Hg19::chr21:20752617..20752622,-	p@chr21:20752617..20752622, -
1.55e-98	FFCP PHASE1:Hg19::chr3:178947187..178947192,+	p@chr3:178947187..178947192, +
1.55e-98	FFCP PHASE2:Hg19::chr14:106829914..106829921,-	p1@HM996258, p1@HM996415, p1@HM996438
1.55e-98	FFCP PHASE1:Hg19::chr21:20752389..20752420,-	p@chr21:20752389..20752420, -
1.55e-98	FFCP PHASE2:Hg19::chr6:166581583..166581586,+	p@chr6:166581583..166581586, +
1.55e-98	FFCP PHASE2:Hg19::chr4:8046897..8046900,+	p@chr4:8046897..8046900, +
1.55e-98	FFCP PHASE1:Hg19::chr3:79363599..79363606,+	p@chr3:79363599..79363606, +
1.55e-98	FFCP PHASE2:Hg19::chr6:39962295..39962305,+	p@chr6:39962295..39962305, +
1.55e-98	FFCP PHASE1:Hg19::chr12:117256221..117256231,+	p@chr12:117256221..117256231, +
1.55e-98	FFCP PHASE1:Hg19::chr6:164466441..164466449,+	p@chr6:164466441..164466449, +
1.55e-98	FFCP PHASE2:Hg19::chr9:138904824..138904829,+	p@chr9:138904824..138904829, +
1.55e-98	FFCP PHASE1:Hg19::chr4:176358284..176358287,-	p@chr4:176358284..176358287, -
1.55e-98	FFCP PHASE1:Hg19::chr15:66464730..66464736,-	p@chr15:66464730..66464736, -
1.55e-98	FFCP PHASE1:Hg19::chr11:26124040..26124064,-	p@chr11:26124040..26124064, -
1.55e-98	FFCP PHASE2:Hg19::chr1:17349654..17349690,-	p6@SDHB
1.55e-98	FFCP PHASE1:Hg19::chr21:20867728..20867731,-	p@chr21:20867728..20867731, -
1.55e-98	FFCP PHASE1:Hg19::chr5:88646759..88646764,+	p@chr5:88646759..88646764, +
1.55e-98	FFCP PHASE1:Hg19::chr12:122458855..122458857,+	p16@BCL7A
1.55e-98	FFCP PHASE2:Hg19::chr14:53594794..53594799,+	p@chr14:53594794..53594799, +
1.55e-98	FFCP PHASE1:Hg19::chr3:168236611..168236612,-	p@chr3:168236611..168236612, -
1.55e-98	FFCP PHASE2:Hg19::chr2:77746775..77746779,-	p14@LRRTM4
1.55e-98	FFCP PHASE1:Hg19::chr1:17349613..17349631,-	p8@SDHB
1.55e-98	FFCP PHASE2:Hg19::chr17:76471146..76471155,+	p@chr17:76471146..76471155, +
1.55e-98	FFCP PHASE1:Hg19::chr2:77746703..77746711,-	p9@LRRTM4
1.55e-98	FFCP PHASE2:Hg19::chr10:56410468..56410499,-	p@chr10:56410468..56410499, -
1.55e-98	FFCP PHASE2:Hg19::chr22:23234780..23234786,+	p@chr22:23234780..23234786, +
1.55e-98	FFCP PHASE2:Hg19::chr3:158747347..158747353,+	p@chr3:158747347..158747353, +
1.55e-98	FFCP PHASE2:Hg19::chr3:19436672..19436686,+	p@chr3:19436672..19436686, +
1.55e-98	FFCP PHASE1:Hg19::chr12:122462770..122462775,+	p@chr12:122462770..122462775, +
1.55e-98	FFCP PHASE1:Hg19::chr21:20752617..20752622,-	p@chr21:20752617..20752622, -
1.55e-98	FFCP PHASE2:Hg19::chr6:166581590..166581596,+	p@chr6:166581590..166581596, +
1.55e-98	FFCP PHASE2:Hg19::chr4:8046990..8046993,-	p@chr4:8046990..8046993, -
1.55e-98	FFCP PHASE2:Hg19::chr17:76475275..76475285,-	p@chr17:76475275..76475285, -
1.55e-98	FFCP PHASE2:Hg19::chr3:6686484..6686491,+	p@chr3:6686484..6686491, +
1.55e-98	FFCP PHASE1:Hg19::chr6:166581583..166581586,+	p@chr6:166581583..166581586, +
1.55e-98	FFCP PHASE2:Hg19::chr2:77581116..77581120,-	p@chr2:77581116..77581120, -
1.55e-98	FFCP PHASE1:Hg19::chr12:40991131..40991149,+	p@chr12:40991131..40991149, +
1.55e-98	FFCP PHASE1:Hg19::chr14:106829914..106829921,-	p1@HM996258, p1@HM996415, p1@HM996438
1.55e-98	FFCP PHASE2:Hg19::chr6:39962337..39962342,+	p@chr6:39962337..39962342, +
1.55e-98	FFCP PHASE1:Hg19::chr6:39962295..39962305,+	p@chr6:39962295..39962305, +
1.55e-98	FFCP PHASE1:Hg19::chr4:8046897..8046900,+	p@chr4:8046897..8046900, +
1.55e-98	FFCP PHASE2:Hg19::chr5:114291872..114291873,+	p@chr5:114291872..114291873, +
1.55e-98	FFCP PHASE2:Hg19::chr4:3881462..3881469,-	p@chr4:3881462..3881469, -
1.55e-98	FFCP PHASE2:Hg19::chr12:4313331..4313334,+	p@chr12:4313331..4313334, +
1.55e-98	FFCP PHASE1:Hg19::chr3:168337915..168337930,-	p@chr3:168337915..168337930, -
1.55e-98	FFCP PHASE1:Hg19::chr1:17349654..17349690,-	p6@SDHB
1.55e-98	FFCP PHASE2:Hg19::chr17:76471163..76471166,+	p@chr17:76471163..76471166, +
1.55e-98	FFCP PHASE2:Hg19::chr11:26122006..26122011,-	p@chr11:26122006..26122011, -
1.55e-98	FFCP PHASE1:Hg19::chr2:77746775..77746779,-	p14@LRRTM4
1.55e-98	FFCP PHASE2:Hg19::chr6:164466325..164466331,+	p@chr6:164466325..164466331, +
1.55e-98	FFCP PHASE2:Hg19::chrX:89012355..89012363,+	p@chrX:89012355..89012363, +
1.55e-98	FFCP PHASE1:Hg19::chr17:76471146..76471155,+	p@chr17:76471146..76471155, +
1.55e-98	FFCP PHASE2:Hg19::chr12:8808206..8808209,-	p@chr12:8808206..8808209, -
1.55e-98	FFCP PHASE1:Hg19::chr22:23234780..23234786,+	p@chr22:23234780..23234786, +
1.55e-98	FFCP PHASE2:Hg19::chr12:117256221..117256231,+	p@chr12:117256221..117256231, +
1.55e-98	FFCP PHASE1:Hg19::chr9:138904824..138904829,+	p@chr9:138904824..138904829, +
1.55e-98	FFCP PHASE1:Hg19::chr6:166581590..166581596,+	p@chr6:166581590..166581596, +
1.55e-98	FFCP PHASE1:Hg19::chr3:19436672..19436686,+	p@chr3:19436672..19436686, +
1.55e-98	FFCP PHASE1:Hg19::chr17:76475275..76475285,-	p@chr17:76475275..76475285, -
1.55e-98	FFCP PHASE1:Hg19::chr3:6686484..6686491,+	p@chr3:6686484..6686491, +
1.55e-98	FFCP PHASE1:Hg19::chr2:77581116..77581120,-	p@chr2:77581116..77581120, -
1.55e-98	FFCP PHASE1:Hg19::chr6:39962337..39962342,+	p@chr6:39962337..39962342, +
1.55e-98	FFCP PHASE1:Hg19::chr4:8046990..8046993,-	p@chr4:8046990..8046993, -
1.55e-98	FFCP PHASE1:Hg19::chr14:53594794..53594799,+	p@chr14:53594794..53594799, +
1.55e-98	FFCP PHASE2:Hg19::chr12:122458855..122458857,+	p16@BCL7A
1.55e-98	FFCP PHASE2:Hg19::chr21:20747453..20747465,-	p@chr21:20747453..20747465, -
1.55e-98	FFCP PHASE2:Hg19::chrX:42727038..42727047,-	p@chrX:42727038..42727047, -
1.55e-98	FFCP PHASE1:Hg19::chr4:3881462..3881469,-	p@chr4:3881462..3881469, -
1.55e-98	FFCP PHASE2:Hg19::chr11:26124040..26124064,-	p@chr11:26124040..26124064, -
1.55e-98	FFCP PHASE1:Hg19::chr3:158747347..158747353,+	p@chr3:158747347..158747353, +
1.55e-98	FFCP PHASE2:Hg19::chr6:164466345..164466352,+	p@chr6:164466345..164466352, +
1.55e-98	FFCP PHASE2:Hg19::chr1:101853882..101853891,-	p@chr1:101853882..101853891, -
1.55e-98	FFCP PHASE1:Hg19::chr12:40953942..40953946,+	p@chr12:40953942..40953946, +
1.55e-98	FFCP PHASE2:Hg19::chr4:176353908..176353917,-	p@chr4:176353908..176353917, -
1.55e-98	FFCP PHASE1:Hg19::chr6:164466325..164466331,+	p@chr6:164466325..164466331, +
1.55e-98	FFCP PHASE2:Hg19::chr12:122462770..122462775,+	p@chr12:122462770..122462775, +
1.55e-98	FFCP PHASE1:Hg19::chr17:76471163..76471166,+	p@chr17:76471163..76471166, +
1.55e-98	FFCP PHASE2:Hg19::chr8:128270027..128270033,-	p@chr8:128270027..128270033, -
1.55e-98	FFCP PHASE1:Hg19::chrX:89012355..89012363,+	p@chrX:89012355..89012363, +
1.55e-98	FFCP PHASE2:Hg19::chr12:40991131..40991149,+	p@chr12:40991131..40991149, +
1.55e-98	FFCP PHASE1:Hg19::chr12:8808206..8808209,-	p@chr12:8808206..8808209, -
1.55e-98	FFCP PHASE2:Hg19::chr6:166581265..166581274,-	p5@T
1.55e-98	FFCP PHASE2:Hg19::chr7:86415255..86415288,+	p@chr7:86415255..86415288, +
1.55e-98	FFCP PHASE1:Hg19::chr5:114291872..114291873,+	p@chr5:114291872..114291873, +
1.55e-98	FFCP PHASE2:Hg19::chr3:168236611..168236612,-	p@chr3:168236611..168236612, -
1.55e-98	FFCP PHASE2:Hg19::chr3:178947187..178947192,+	p@chr3:178947187..178947192, +

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