CL:0000990
From FANTOM5_SSTAR
Name: | conventional dendritic cell | ||
---|---|---|---|
Namespace: | FANTOM | ||
Definition: | "Conventional dendritic cell is a dendritic cell that is CD11c-high." [GO_REF:0000031, GOC:amm, PMID:17850486] | ||
Xrefs: |
| ||
Synonyms: |
"cDC" EXACT [] "DC1" EXACT [] "dendritic reticular cell" EXACT [] "interdigitating cell" BROAD [] "type 1 DC" EXACT [] "veiled cell" BROAD [] | ||
Comments: | Originally described in the dendritic cell ontology (DC_CL: 0000003)(PMID: 19243617) These cells are also CD20-negative, MHCII-positive. |
Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.
link to ontology dataset
data
Parents
is_a: | CL:0000451(dendritic cell) |
---|
Children
is a: | CL:0000453 (Langerhans cell),CL:0000840 (immature conventional dendritic cell) |
---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10457-106G7 (squamous cell lung carcinoma cell line:LC-1F)
- 10501-107C6 (squamous cell lung carcinoma cell line:RERF-LC-AI)
- 11227-116C3 (Dendritic Cells - monocyte immature derived, donor1)
- 11228-116C4 (Dendritic Cells - plasmacytoid, donor1)
- 11308-117C3 (Dendritic Cells - monocyte immature derived, donor2)
- 11384-118B7 (Dendritic Cells - monocyte immature derived, donor3)
- 11901-125F2 (migratory langerhans cells, donor1)
- 11902-125F3 (migratory langerhans cells, donor2)
- 11903-125F4 (migratory langerhans cells, donor3)
- 11904-125F5 (immature langerhans cells, donor1)
... further results Mouse (Mus musculus)
- 10457-106G7 (squamous cell lung carcinoma cell line:LC-1F)
- 10501-107C6 (squamous cell lung carcinoma cell line:RERF-LC-AI)
- 11227-116C3 (Dendritic Cells - monocyte immature derived, donor1)
- 11228-116C4 (Dendritic Cells - plasmacytoid, donor1)
- 11308-117C3 (Dendritic Cells - monocyte immature derived, donor2)
- 11384-118B7 (Dendritic Cells - monocyte immature derived, donor3)
- 11901-125F2 (migratory langerhans cells, donor1)
- 11902-125F3 (migratory langerhans cells, donor2)
- 11903-125F4 (migratory langerhans cells, donor3)
- 11904-125F5 (immature langerhans cells, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000990 (conventional dendritic cell), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
9.96e-174 | FFCP PHASE1:Hg19::chr15:101535004..101535045,+#_1ec5ca570a35492eb6cdf2322d4a86a3 | p@chr15:101535004..101535045, + |
9.96e-174 | FFCP PHASE2:Hg19::chr15:101535004..101535045,+#_1ec5ca570a35492eb6cdf2322d4a86a3 | p@chr15:101535004..101535045, + |
3.95e-152 | FFCP PHASE1:Hg19::chr15:101534994..101535003,+#_e123fca2244f1fe4dcf6882733320750 | p@chr15:101534994..101535003, + |
3.95e-152 | FFCP PHASE2:Hg19::chr16:57398251..57398254,+#_e123fca2244f1fe4dcf6882733320750 | p@chr16:57398251..57398254, + |
3.95e-152 | FFCP PHASE2:Hg19::chr15:101534994..101535003,+#_e123fca2244f1fe4dcf6882733320750 | p@chr15:101534994..101535003, + |
3.95e-152 | FFCP PHASE1:Hg19::chr16:57398251..57398254,+#_e123fca2244f1fe4dcf6882733320750 | p@chr16:57398251..57398254, + |
1.9e-139 | FFCP PHASE2:Hg19::chr13:75884283..75884317,-#_15103c23248e87474d89e8b81ac2a6ea | p@chr13:75884283..75884317, - |
1.9e-139 | FFCP PHASE1:Hg19::chr13:75884283..75884317,-#_15103c23248e87474d89e8b81ac2a6ea | p@chr13:75884283..75884317, - |
1.82e-133 | FFCP PHASE2:Hg19::chr15:101529373..101529387,+#_85cbdbc3b5a525b0da9259a6f318f606 | p@chr15:101529373..101529387, + |
1.82e-133 | FFCP PHASE2:Hg19::chr16:10960104..10960115,+#_85cbdbc3b5a525b0da9259a6f318f606 | p4@AB463580 |
1.82e-133 | FFCP PHASE1:Hg19::chr16:10960104..10960115,+#_85cbdbc3b5a525b0da9259a6f318f606 | p4@AB463580 |
1.82e-133 | FFCP PHASE1:Hg19::chr15:101529373..101529387,+#_85cbdbc3b5a525b0da9259a6f318f606 | p@chr15:101529373..101529387, + |
1.42e-130 | FFCP PHASE1:Hg19::chr3:119198717..119198735,+#_68339fa729e72aea9bd64b29de987e3d | p@chr3:119198717..119198735, + |
1.42e-130 | FFCP PHASE1:Hg19::chr18:59991691..59991708,+#_68339fa729e72aea9bd64b29de987e3d | p@chr18:59991691..59991708, + |
1.42e-130 | FFCP PHASE2:Hg19::chr3:119198717..119198735,+#_68339fa729e72aea9bd64b29de987e3d | p@chr3:119198717..119198735, + |
1.42e-130 | FFCP PHASE1:Hg19::chr2:61080954..61080964,+#_68339fa729e72aea9bd64b29de987e3d | p@chr2:61080954..61080964, + |
1.42e-130 | FFCP PHASE2:Hg19::chr2:61080954..61080964,+#_68339fa729e72aea9bd64b29de987e3d | p@chr2:61080954..61080964, + |
1.42e-130 | FFCP PHASE2:Hg19::chr18:59991691..59991708,+#_68339fa729e72aea9bd64b29de987e3d | p@chr18:59991691..59991708, + |
3.16e-127 | FFCP PHASE2:Hg19::chr16:10960091..10960099,+#_4a83ff0e022691943dea7d07fd2a6f49 | p3@AB463580 |
3.16e-127 | FFCP PHASE1:Hg19::chr16:10960091..10960099,+#_4a83ff0e022691943dea7d07fd2a6f49 | p3@AB463580 |
8.55e-119 | FFCP PHASE1:Hg19::chr12:112513512..112513567,-#_fa2d33d370f7adc04cbba2f873c97cd0 | p@chr12:112513512..112513567, - |
8.55e-119 | FFCP PHASE2:Hg19::chr12:112513512..112513567,-#_fa2d33d370f7adc04cbba2f873c97cd0 | p@chr12:112513512..112513567, - |
8.55e-119 | FFCP PHASE1:Hg19::chr16:57398441..57398460,+#_fa2d33d370f7adc04cbba2f873c97cd0 | p@chr16:57398441..57398460, + |
8.55e-119 | FFCP PHASE2:Hg19::chr16:57398441..57398460,+#_fa2d33d370f7adc04cbba2f873c97cd0 | p@chr16:57398441..57398460, + |
1.19e-116 | FFCP PHASE2:Hg19::chr13:75884320..75884362,-#_36a9804301a132c99964e91c825ab26a | p@chr13:75884320..75884362, - |
1.19e-116 | FFCP PHASE1:Hg19::chr13:75884320..75884362,-#_36a9804301a132c99964e91c825ab26a | p@chr13:75884320..75884362, - |
3.66e-112 | FFCP PHASE1:Hg19::chr16:57398263..57398266,+#_df8396f901a98c61a096e7333be276b4 | p@chr16:57398263..57398266, + |
3.66e-112 | FFCP PHASE2:Hg19::chr16:57398263..57398266,+#_df8396f901a98c61a096e7333be276b4 | p@chr16:57398263..57398266, + |
4.43e-112 | FFCP PHASE1:Hg19::chr16:57398271..57398274,+#_e447576d9d84e89de1a0f32c5f9951f6 | p@chr16:57398271..57398274, + |
4.43e-112 | FFCP PHASE2:Hg19::chr16:57398271..57398274,+#_e447576d9d84e89de1a0f32c5f9951f6 | p@chr16:57398271..57398274, + |
4.6e-109 | FFCP PHASE2:Hg19::chr16:10959880..10959887,+#_fb55be8ce958b459609dde489b645a52 | p6@AB463580 |
4.6e-109 | FFCP PHASE2:Hg19::chr3:119188705..119188718,+#_fb55be8ce958b459609dde489b645a52 | p@chr3:119188705..119188718, + |
4.6e-109 | FFCP PHASE2:Hg19::chr6:32726761..32726781,-#_fb55be8ce958b459609dde489b645a52 | p@chr6:32726761..32726781, - |
4.6e-109 | FFCP PHASE1:Hg19::chr16:10959880..10959887,+#_fb55be8ce958b459609dde489b645a52 | p6@AB463580 |
4.6e-109 | FFCP PHASE1:Hg19::chr19:45487650..45487661,+#_fb55be8ce958b459609dde489b645a52 | p@chr19:45487650..45487661, + |
4.6e-109 | FFCP PHASE1:Hg19::chr6:32729529..32729536,-#_fb55be8ce958b459609dde489b645a52 | p3@M95729 |
4.6e-109 | FFCP PHASE1:Hg19::chr3:52813932..52813943,+#_fb55be8ce958b459609dde489b645a52 | p11@ITIH1 |
4.6e-109 | FFCP PHASE2:Hg19::chr8:120974832..120974840,+#_fb55be8ce958b459609dde489b645a52 | p@chr8:120974832..120974840, + |
4.6e-109 | FFCP PHASE2:Hg19::chr19:45487650..45487661,+#_fb55be8ce958b459609dde489b645a52 | p@chr19:45487650..45487661, + |
4.6e-109 | FFCP PHASE2:Hg19::chr6:32729529..32729536,-#_fb55be8ce958b459609dde489b645a52 | p3@M95729 |
4.6e-109 | FFCP PHASE2:Hg19::chr1:201376546..201376550,+#_fb55be8ce958b459609dde489b645a52 | p@chr1:201376546..201376550, + |
4.6e-109 | FFCP PHASE2:Hg19::chr16:10959804..10959811,+#_fb55be8ce958b459609dde489b645a52 | p5@AB463580 |
4.6e-109 | FFCP PHASE1:Hg19::chr13:75884392..75884395,-#_fb55be8ce958b459609dde489b645a52 | p@chr13:75884392..75884395, - |
4.6e-109 | FFCP PHASE2:Hg19::chr16:10885979..10885991,+#_fb55be8ce958b459609dde489b645a52 | p@chr16:10885979..10885991, + |
4.6e-109 | FFCP PHASE1:Hg19::chr16:10959804..10959811,+#_fb55be8ce958b459609dde489b645a52 | p5@AB463580 |
4.6e-109 | FFCP PHASE1:Hg19::chr3:119188705..119188718,+#_fb55be8ce958b459609dde489b645a52 | p@chr3:119188705..119188718, + |
4.6e-109 | FFCP PHASE1:Hg19::chr8:120974832..120974840,+#_fb55be8ce958b459609dde489b645a52 | p@chr8:120974832..120974840, + |
4.6e-109 | FFCP PHASE2:Hg19::chr3:52813932..52813943,+#_fb55be8ce958b459609dde489b645a52 | p11@ITIH1 |
4.6e-109 | FFCP PHASE2:Hg19::chr16:10959868..10959879,+#_fb55be8ce958b459609dde489b645a52 | p2@AB463580 |
4.6e-109 | FFCP PHASE1:Hg19::chr6:32726761..32726781,-#_fb55be8ce958b459609dde489b645a52 | p@chr6:32726761..32726781, - |
4.6e-109 | FFCP PHASE1:Hg19::chr1:201376546..201376550,+#_fb55be8ce958b459609dde489b645a52 | p@chr1:201376546..201376550, + |
4.6e-109 | FFCP PHASE1:Hg19::chr16:10959868..10959879,+#_fb55be8ce958b459609dde489b645a52 | p2@AB463580 |
4.6e-109 | FFCP PHASE2:Hg19::chr13:75884392..75884395,-#_fb55be8ce958b459609dde489b645a52 | p@chr13:75884392..75884395, - |
4.6e-109 | FFCP PHASE1:Hg19::chr16:10885979..10885991,+#_fb55be8ce958b459609dde489b645a52 | p@chr16:10885979..10885991, + |
4.63e-108 | FFCP PHASE2:Hg19::chr16:57397882..57397931,-#_deaa52a840ab0488621f4487c79b07f3 | p1@CU693343 |
4.63e-108 | FFCP PHASE1:Hg19::chr16:57397882..57397931,-#_deaa52a840ab0488621f4487c79b07f3 | p1@CU693343 |
5.32e-108 | FFCP PHASE2:Hg19::chr16:57397593..57397602,+#_5765d0e25382654070edaaf3d71fd5d5 | p@chr16:57397593..57397602, + |
5.32e-108 | FFCP PHASE1:Hg19::chr16:57397593..57397602,+#_5765d0e25382654070edaaf3d71fd5d5 | p@chr16:57397593..57397602, + |
8.06e-108 | FFCP PHASE1:Hg19::chr16:57399022..57399038,+#_288c76ded6fffcb90068d95f631ef504 | p@chr16:57399022..57399038, + |
8.06e-108 | FFCP PHASE2:Hg19::chr16:57399022..57399038,+#_288c76ded6fffcb90068d95f631ef504 | p@chr16:57399022..57399038, + |
2.5e-107 | FFCP PHASE2:Hg19::chr16:57394436..57394449,+#_08bdc8533db89a66db1910012672fda4 | p@chr16:57394436..57394449, + |
2.5e-107 | FFCP PHASE1:Hg19::chr16:57394436..57394449,+#_08bdc8533db89a66db1910012672fda4 | p@chr16:57394436..57394449, + |
3.43e-107 | FFCP PHASE1:Hg19::chr16:57399043..57399070,+#_17a996806499e6b77e3b5da90b04696a | p@chr16:57399043..57399070, + |
3.43e-107 | FFCP PHASE2:Hg19::chr16:57399043..57399070,+#_17a996806499e6b77e3b5da90b04696a | p@chr16:57399043..57399070, + |
4.01e-107 | FFCP PHASE2:Hg19::chr16:57397927..57397934,+#_f2230b514217bbb6da2bcd16b4c46fcc | p@chr16:57397927..57397934, + |
4.01e-107 | FFCP PHASE1:Hg19::chr16:57397927..57397934,+#_f2230b514217bbb6da2bcd16b4c46fcc | p@chr16:57397927..57397934, + |
1.07e-100 | FFCP PHASE2:Hg19::chr16:57398987..57399006,+#_ddedf8fb13b0dced5a0cd05870d225de | p@chr16:57398987..57399006, + |
1.07e-100 | FFCP PHASE2:Hg19::chr16:57397735..57397758,-#_ddedf8fb13b0dced5a0cd05870d225de | p3@CU693343 |
1.07e-100 | FFCP PHASE1:Hg19::chr16:57397735..57397758,-#_ddedf8fb13b0dced5a0cd05870d225de | p3@CU693343 |
1.07e-100 | FFCP PHASE1:Hg19::chr16:57398987..57399006,+#_ddedf8fb13b0dced5a0cd05870d225de | p@chr16:57398987..57399006, + |
2.05e-99 | FFCP PHASE1:Hg19::chr6:341221..341236,-#_a50bda5d69e5a966bcaf02f73e8c661a | p@chr6:341221..341236, - |
2.05e-99 | FFCP PHASE2:Hg19::chr6:341221..341236,-#_a50bda5d69e5a966bcaf02f73e8c661a | p@chr6:341221..341236, - |
5.3e-94 | FFCP PHASE2:Hg19::chr16:57397561..57397572,+#_351ab349f116915f027d44936a03563d | p@chr16:57397561..57397572, + |
5.3e-94 | FFCP PHASE1:Hg19::chr16:57397561..57397572,+#_351ab349f116915f027d44936a03563d | p@chr16:57397561..57397572, + |
3.38e-91 | FFCP PHASE2:Hg19::chr2:173867941..173867955,+#_c97711d788e437703d252840386b669c | p@chr2:173867941..173867955, + |
3.38e-91 | FFCP PHASE2:Hg19::chr1:159272441..159272452,+#_c97711d788e437703d252840386b669c | p5@FCER1A |
3.38e-91 | FFCP PHASE1:Hg19::chr13:75884255..75884262,-#_c97711d788e437703d252840386b669c | p@chr13:75884255..75884262, - |
3.38e-91 | FFCP PHASE1:Hg19::chr2:173867941..173867955,+#_c97711d788e437703d252840386b669c | p@chr2:173867941..173867955, + |
3.38e-91 | FFCP PHASE1:Hg19::chr1:159272441..159272452,+#_c97711d788e437703d252840386b669c | p5@FCER1A |
3.38e-91 | FFCP PHASE2:Hg19::chr13:75884255..75884262,-#_c97711d788e437703d252840386b669c | p@chr13:75884255..75884262, - |
4.08e-91 | FFCP PHASE2:Hg19::chr1:159272420..159272431,+#_4931bad15025c2d942da1f334949e94d | p3@FCER1A |
4.08e-91 | FFCP PHASE1:Hg19::chr1:159272420..159272431,+#_4931bad15025c2d942da1f334949e94d | p3@FCER1A |
1.95e-88 | FFCP PHASE2:Hg19::chr16:57394384..57394402,+#_03bbe7b7c12b108f68ab5862178e8099 | p@chr16:57394384..57394402, + |
1.95e-88 | FFCP PHASE1:Hg19::chr16:57394384..57394402,+#_03bbe7b7c12b108f68ab5862178e8099 | p@chr16:57394384..57394402, + |
2.18e-88 | FFCP PHASE2:Hg19::chr16:57397581..57397590,+#_771db516e21cdad11eaef5a99091b482 | p@chr16:57397581..57397590, + |
2.18e-88 | FFCP PHASE1:Hg19::chr16:57397581..57397590,+#_771db516e21cdad11eaef5a99091b482 | p@chr16:57397581..57397590, + |
1.15e-87 | FFCP PHASE2:Hg19::chr1:157108764..157108776,-#_41301066f1da97992e82e42d97faec1d | p7@ETV3 |
1.15e-87 | FFCP PHASE1:Hg19::chr1:157108764..157108776,-#_41301066f1da97992e82e42d97faec1d | p7@ETV3 |
1.37e-87 | FFCP PHASE2:Hg19::chr16:57399642..57399651,+#_45bad81c2d27cef080fad815b8dcf782 | p@chr16:57399642..57399651, + |
1.37e-87 | FFCP PHASE2:Hg19::chr3:52813951..52813958,+#_45bad81c2d27cef080fad815b8dcf782 | p13@ITIH1 |
1.37e-87 | FFCP PHASE2:Hg19::chr14:65641128..65641129,-#_45bad81c2d27cef080fad815b8dcf782 | p@chr14:65641128..65641129, - |
1.37e-87 | FFCP PHASE2:Hg19::chr2:61081135..61081167,+#_45bad81c2d27cef080fad815b8dcf782 | p@chr2:61081135..61081167, + |
1.37e-87 | FFCP PHASE1:Hg19::chr4:14845952..14845956,-#_45bad81c2d27cef080fad815b8dcf782 | p@chr4:14845952..14845956, - |
1.37e-87 | FFCP PHASE1:Hg19::chr17:6982145..6982156,-#_45bad81c2d27cef080fad815b8dcf782 | p1@CU691636 |
1.37e-87 | FFCP PHASE1:Hg19::chr6:32729494..32729506,-#_45bad81c2d27cef080fad815b8dcf782 | p1@M95729 |
1.37e-87 | FFCP PHASE2:Hg19::chr10:112109413..112109419,-#_45bad81c2d27cef080fad815b8dcf782 | p@chr10:112109413..112109419, - |
1.37e-87 | FFCP PHASE1:Hg19::chr13:32672504..32672512,-#_45bad81c2d27cef080fad815b8dcf782 | p@chr13:32672504..32672512, - |
1.37e-87 | FFCP PHASE2:Hg19::chr3:52813997..52814015,+#_45bad81c2d27cef080fad815b8dcf782 | p9@ITIH1 |
1.37e-87 | FFCP PHASE2:Hg19::chr12:112590221..112590232,+#_45bad81c2d27cef080fad815b8dcf782 | p@chr12:112590221..112590232, + |
1.37e-87 | FFCP PHASE2:Hg19::chr6:32729494..32729506,-#_45bad81c2d27cef080fad815b8dcf782 | p1@M95729 |