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CL:0002327

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Name:mammary gland epithelial cell
Namespace:FANTOM
Definition:"An epithelial cell of the mammary gland." [GOC:tfm, PMID:19022771]
Xrefs:
links:
BTO:0004300
Synonyms: "breast epithelial cell" EXACT []
Created by:tmeehan
Creation date:2010-09-20T01:49:37Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000066(epithelial cell),CL:0002371(somatic cell)
part_of:UBERON:0001911(mammary gland)



Children


derives from:FF:0000088 (human mammary epithelial cell sample),FF:0101908 (MDA-MB-453 cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002327 (mammary gland epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
5.72e-89FFCP PHASE2:Hg19::chr12:122439564..122439597,+#_0f2aa49376e6cfd3c5802007e9f7d59bp4@WDR66
5.72e-89FFCP PHASE1:Hg19::chr12:122439564..122439597,+#_0f2aa49376e6cfd3c5802007e9f7d59bp4@WDR66
2.57e-88FFCP PHASE2:Hg19::chr19:15160255..15160260,+#_752277af3f453d3ebed72ce4d1812d2cp4@CASP14
2.57e-88FFCP PHASE1:Hg19::chr19:15160255..15160260,+#_752277af3f453d3ebed72ce4d1812d2cp4@CASP14
2.4e-66FFCP PHASE2:Hg19::chr3:101772894..101772897,+#_0c6ddfe467d1bb69e738375b899bd81ap@chr3:101772894..101772897, +
2.4e-66FFCP PHASE1:Hg19::chr3:101772894..101772897,+#_0c6ddfe467d1bb69e738375b899bd81ap@chr3:101772894..101772897, +
3.35e-66FFCP PHASE2:Hg19::chr17:8021710..8021722,-#_4fd9262532a8ce860194d921f1750a12p5@ALOXE3
3.35e-66FFCP PHASE1:Hg19::chr17:8021710..8021722,-#_4fd9262532a8ce860194d921f1750a12p5@ALOXE3
4.67e-66FFCP PHASE2:Hg19::chr20:49047228..49047236,-#_435bc25d49f3a4bcc2f5d4cd9184a083p@chr20:49047228..49047236, -
4.67e-66FFCP PHASE1:Hg19::chr20:49047228..49047236,-#_435bc25d49f3a4bcc2f5d4cd9184a083p@chr20:49047228..49047236, -
9.51e-64FFCP PHASE2:Hg19::chr3:114168260..114168264,+#_681337e9496f2ecd65d2c7176cb11323p@chr3:114168260..114168264, +
9.51e-64FFCP PHASE1:Hg19::chr3:114168260..114168264,+#_681337e9496f2ecd65d2c7176cb11323p@chr3:114168260..114168264, +
1.46e-63FFCP PHASE2:Hg19::chr2:69026957..69026966,+#_1d47102b0da2a62d8deab0033d2073afp@chr2:69026957..69026966, +
1.46e-63FFCP PHASE1:Hg19::chr2:69026957..69026966,+#_1d47102b0da2a62d8deab0033d2073afp@chr2:69026957..69026966, +
3.1e-50FFCP PHASE2:Hg19::chr11:67436996..67437009,-#_eedbea526b0293360d2cd21efb3e3319p@chr11:67436996..67437009, -
3.1e-50FFCP PHASE1:Hg19::chr7:42429377..42429382,-#_eedbea526b0293360d2cd21efb3e3319p@chr7:42429377..42429382, -
3.1e-50FFCP PHASE1:Hg19::chr20:31781321..31781329,+#_eedbea526b0293360d2cd21efb3e3319p2@BPIFA4P
3.1e-50FFCP PHASE2:Hg19::chr10:37451700..37451715,+#_eedbea526b0293360d2cd21efb3e3319p@chr10:37451700..37451715, +
3.1e-50FFCP PHASE1:Hg19::chr8:58943437..58943442,+#_eedbea526b0293360d2cd21efb3e3319p@chr8:58943437..58943442, +
3.1e-50FFCP PHASE2:Hg19::chr6:10141294..10141304,+#_eedbea526b0293360d2cd21efb3e3319p@chr6:10141294..10141304, +
3.1e-50FFCP PHASE1:Hg19::chr5:176519127..176519154,+#_eedbea526b0293360d2cd21efb3e3319p@chr5:176519127..176519154, +
3.1e-50FFCP PHASE2:Hg19::chr6:50785214..50785224,+#_eedbea526b0293360d2cd21efb3e3319p@chr6:50785214..50785224, +
3.1e-50FFCP PHASE2:Hg19::chr17:61514114..61514119,-#_eedbea526b0293360d2cd21efb3e3319p@chr17:61514114..61514119, -
3.1e-50FFCP PHASE2:Hg19::chr1:53559544..53559570,-#_eedbea526b0293360d2cd21efb3e3319p@chr1:53559544..53559570, -
3.1e-50FFCP PHASE2:Hg19::chr19:48010224..48010231,-#_eedbea526b0293360d2cd21efb3e3319p@chr19:48010224..48010231, -
3.1e-50FFCP PHASE1:Hg19::chr10:37555579..37555584,+#_eedbea526b0293360d2cd21efb3e3319p@chr10:37555579..37555584, +
3.1e-50FFCP PHASE1:Hg19::chrX:153603570..153603573,-#_eedbea526b0293360d2cd21efb3e3319p@chrX:153603570..153603573, -
3.1e-50FFCP PHASE2:Hg19::chr1:40598486..40598500,+#_eedbea526b0293360d2cd21efb3e3319p1@ENST00000430724
3.1e-50FFCP PHASE2:Hg19::chr10:37555579..37555584,+#_eedbea526b0293360d2cd21efb3e3319p@chr10:37555579..37555584, +
3.1e-50FFCP PHASE2:Hg19::chr9:131871491..131871519,+#_eedbea526b0293360d2cd21efb3e3319p@chr9:131871491..131871519, +
3.1e-50FFCP PHASE1:Hg19::chr15:69857515..69857518,+#_eedbea526b0293360d2cd21efb3e3319p3@ENST00000559477
3.1e-50FFCP PHASE2:Hg19::chr7:94277045..94277057,-#_eedbea526b0293360d2cd21efb3e3319p@chr7:94277045..94277057, -
3.1e-50FFCP PHASE2:Hg19::chr9:117379097..117379106,+#_eedbea526b0293360d2cd21efb3e3319p3@AB528759
3.1e-50FFCP PHASE1:Hg19::chr8:30584507..30584514,-#_eedbea526b0293360d2cd21efb3e3319p13@GSR
3.1e-50FFCP PHASE1:Hg19::chr21:43540912..43540915,+#_eedbea526b0293360d2cd21efb3e3319p15@UMODL1
3.1e-50FFCP PHASE2:Hg19::chr1:236686445..236686452,+#_eedbea526b0293360d2cd21efb3e3319p18@LGALS8
3.1e-50FFCP PHASE1:Hg19::chr1:53559544..53559570,-#_eedbea526b0293360d2cd21efb3e3319p@chr1:53559544..53559570, -
3.1e-50FFCP PHASE2:Hg19::chr1:164559541..164559546,+#_eedbea526b0293360d2cd21efb3e3319p52@PBX1
3.1e-50FFCP PHASE2:Hg19::chr8:30584524..30584529,-#_eedbea526b0293360d2cd21efb3e3319p14@GSR
3.1e-50FFCP PHASE2:Hg19::chr15:69857557..69857562,+#_eedbea526b0293360d2cd21efb3e3319p2@ENST00000559477
3.1e-50FFCP PHASE1:Hg19::chr19:48010224..48010231,-#_eedbea526b0293360d2cd21efb3e3319p@chr19:48010224..48010231, -
3.1e-50FFCP PHASE2:Hg19::chr17:65990378..65990389,-#_eedbea526b0293360d2cd21efb3e3319p@chr17:65990378..65990389, -
3.1e-50FFCP PHASE1:Hg19::chr1:40598486..40598500,+#_eedbea526b0293360d2cd21efb3e3319p1@ENST00000430724
3.1e-50FFCP PHASE1:Hg19::chr17:61514114..61514119,-#_eedbea526b0293360d2cd21efb3e3319p@chr17:61514114..61514119, -
3.1e-50FFCP PHASE1:Hg19::chr6:10141294..10141304,+#_eedbea526b0293360d2cd21efb3e3319p@chr6:10141294..10141304, +
3.1e-50FFCP PHASE2:Hg19::chr11:828104..828109,+#_eedbea526b0293360d2cd21efb3e3319p32@EFCAB4A
3.1e-50FFCP PHASE1:Hg19::chr6:50785214..50785224,+#_eedbea526b0293360d2cd21efb3e3319p@chr6:50785214..50785224, +
3.1e-50FFCP PHASE1:Hg19::chr10:37451725..37451728,+#_eedbea526b0293360d2cd21efb3e3319p@chr10:37451725..37451728, +
3.1e-50FFCP PHASE2:Hg19::chr10:37451725..37451728,+#_eedbea526b0293360d2cd21efb3e3319p@chr10:37451725..37451728, +
3.1e-50FFCP PHASE1:Hg19::chr11:829495..829500,+#_eedbea526b0293360d2cd21efb3e3319p23@EFCAB4A
3.1e-50FFCP PHASE2:Hg19::chr6:50785279..50785289,+#_eedbea526b0293360d2cd21efb3e3319p@chr6:50785279..50785289, +
3.1e-50FFCP PHASE2:Hg19::chr1:190447673..190447683,-#_eedbea526b0293360d2cd21efb3e3319p@chr1:190447673..190447683, -
3.1e-50FFCP PHASE2:Hg19::chr3:169756638..169756645,+#_eedbea526b0293360d2cd21efb3e3319p15@GPR160
3.1e-50FFCP PHASE1:Hg19::chr1:236686445..236686452,+#_eedbea526b0293360d2cd21efb3e3319p18@LGALS8
3.1e-50FFCP PHASE2:Hg19::chr1:11139818..11139830,-#_eedbea526b0293360d2cd21efb3e3319p6@EXOSC10
3.1e-50FFCP PHASE1:Hg19::chr1:164559541..164559546,+#_eedbea526b0293360d2cd21efb3e3319p52@PBX1
3.1e-50FFCP PHASE1:Hg19::chr17:65990378..65990389,-#_eedbea526b0293360d2cd21efb3e3319p@chr17:65990378..65990389, -
3.1e-50FFCP PHASE2:Hg19::chr17:61514163..61514170,-#_eedbea526b0293360d2cd21efb3e3319p@chr17:61514163..61514170, -
3.1e-50FFCP PHASE2:Hg19::chr1:53559600..53559623,-#_eedbea526b0293360d2cd21efb3e3319p@chr1:53559600..53559623, -
3.1e-50FFCP PHASE1:Hg19::chr9:131871491..131871519,+#_eedbea526b0293360d2cd21efb3e3319p@chr9:131871491..131871519, +
3.1e-50FFCP PHASE1:Hg19::chr10:37637623..37637627,+#_eedbea526b0293360d2cd21efb3e3319p1@VN1R53P
3.1e-50FFCP PHASE1:Hg19::chr7:94277045..94277057,-#_eedbea526b0293360d2cd21efb3e3319p@chr7:94277045..94277057, -
3.1e-50FFCP PHASE2:Hg19::chr10:37637623..37637627,+#_eedbea526b0293360d2cd21efb3e3319p1@VN1R53P
3.1e-50FFCP PHASE1:Hg19::chr9:117379097..117379106,+#_eedbea526b0293360d2cd21efb3e3319p3@AB528759
3.1e-50FFCP PHASE2:Hg19::chr5:148231243..148231244,+#_eedbea526b0293360d2cd21efb3e3319p@chr5:148231243..148231244, +
3.1e-50FFCP PHASE2:Hg19::chr16:48281411..48281419,-#_eedbea526b0293360d2cd21efb3e3319p5@ABCC11
3.1e-50FFCP PHASE1:Hg19::chr8:30584524..30584529,-#_eedbea526b0293360d2cd21efb3e3319p14@GSR
3.1e-50FFCP PHASE1:Hg19::chr1:11139818..11139830,-#_eedbea526b0293360d2cd21efb3e3319p6@EXOSC10
3.1e-50FFCP PHASE1:Hg19::chr12:93806120..93806155,-#_eedbea526b0293360d2cd21efb3e3319p@chr12:93806120..93806155, -
3.1e-50FFCP PHASE1:Hg19::chr1:53559600..53559623,-#_eedbea526b0293360d2cd21efb3e3319p@chr1:53559600..53559623, -
3.1e-50FFCP PHASE2:Hg19::chr8:30584533..30584543,-#_eedbea526b0293360d2cd21efb3e3319p9@GSR
3.1e-50FFCP PHASE1:Hg19::chr1:190447673..190447683,-#_eedbea526b0293360d2cd21efb3e3319p@chr1:190447673..190447683, -
3.1e-50FFCP PHASE2:Hg19::chr17:65990392..65990397,-#_eedbea526b0293360d2cd21efb3e3319p@chr17:65990392..65990397, -
3.1e-50FFCP PHASE2:Hg19::chr7:42429365..42429366,-#_eedbea526b0293360d2cd21efb3e3319p@chr7:42429365..42429366, -
3.1e-50FFCP PHASE1:Hg19::chr3:169756638..169756645,+#_eedbea526b0293360d2cd21efb3e3319p15@GPR160
3.1e-50FFCP PHASE1:Hg19::chr17:61514163..61514170,-#_eedbea526b0293360d2cd21efb3e3319p@chr17:61514163..61514170, -
3.1e-50FFCP PHASE1:Hg19::chr6:50785279..50785289,+#_eedbea526b0293360d2cd21efb3e3319p@chr6:50785279..50785289, +
3.1e-50FFCP PHASE2:Hg19::chr5:176514238..176514245,+#_eedbea526b0293360d2cd21efb3e3319p18@FGFR4
3.1e-50FFCP PHASE2:Hg19::chr1:94080175..94080205,-#_eedbea526b0293360d2cd21efb3e3319p@chr1:94080175..94080205, -
3.1e-50FFCP PHASE2:Hg19::chr20:34380919..34380924,+#_eedbea526b0293360d2cd21efb3e3319p@chr20:34380919..34380924, +
3.1e-50FFCP PHASE2:Hg19::chr3:169756667..169756675,+#_eedbea526b0293360d2cd21efb3e3319p14@GPR160
3.1e-50FFCP PHASE1:Hg19::chr5:148231243..148231244,+#_eedbea526b0293360d2cd21efb3e3319p@chr5:148231243..148231244, +
3.1e-50FFCP PHASE2:Hg19::chr3:4722283..4722286,+#_eedbea526b0293360d2cd21efb3e3319p@chr3:4722283..4722286, +
3.1e-50FFCP PHASE1:Hg19::chr17:65990392..65990397,-#_eedbea526b0293360d2cd21efb3e3319p@chr17:65990392..65990397, -
3.1e-50FFCP PHASE2:Hg19::chr21:43540870..43540878,+#_eedbea526b0293360d2cd21efb3e3319p10@UMODL1
3.1e-50FFCP PHASE2:Hg19::chr2:142889081..142889086,-#_eedbea526b0293360d2cd21efb3e3319p11@LRP1B
3.1e-50FFCP PHASE1:Hg19::chr7:42429365..42429366,-#_eedbea526b0293360d2cd21efb3e3319p@chr7:42429365..42429366, -
3.1e-50FFCP PHASE1:Hg19::chr10:8781822..8781825,-#_eedbea526b0293360d2cd21efb3e3319p@chr10:8781822..8781825, -
3.1e-50FFCP PHASE2:Hg19::chr11:7618431..7618436,+#_eedbea526b0293360d2cd21efb3e3319p34@PPFIBP2
3.1e-50FFCP PHASE1:Hg19::chr1:94080175..94080205,-#_eedbea526b0293360d2cd21efb3e3319p@chr1:94080175..94080205, -
3.1e-50FFCP PHASE1:Hg19::chr15:69857557..69857562,+#_eedbea526b0293360d2cd21efb3e3319p2@ENST00000559477
3.1e-50FFCP PHASE1:Hg19::chr8:30584533..30584543,-#_eedbea526b0293360d2cd21efb3e3319p9@GSR
3.1e-50FFCP PHASE2:Hg19::chr10:8781822..8781825,-#_eedbea526b0293360d2cd21efb3e3319p@chr10:8781822..8781825, -
3.1e-50FFCP PHASE1:Hg19::chr11:828104..828109,+#_eedbea526b0293360d2cd21efb3e3319p32@EFCAB4A
3.1e-50FFCP PHASE2:Hg19::chr14:46389767..46389768,+#_eedbea526b0293360d2cd21efb3e3319p@chr14:46389767..46389768, +
3.1e-50FFCP PHASE1:Hg19::chr5:176514238..176514245,+#_eedbea526b0293360d2cd21efb3e3319p18@FGFR4
3.1e-50FFCP PHASE2:Hg19::chr1:189493099..189493102,-#_eedbea526b0293360d2cd21efb3e3319p@chr1:189493099..189493102, -
3.1e-50FFCP PHASE2:Hg19::chr2:149863976..149863986,+#_eedbea526b0293360d2cd21efb3e3319p@chr2:149863976..149863986, +
3.1e-50FFCP PHASE2:Hg19::chr7:42429373..42429374,-#_eedbea526b0293360d2cd21efb3e3319p@chr7:42429373..42429374, -
3.1e-50FFCP PHASE1:Hg19::chr3:169756667..169756675,+#_eedbea526b0293360d2cd21efb3e3319p14@GPR160