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CL:0002570

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Name:mesenchymal stem cell of adipose
Namespace:FANTOM
Definition:"A mesenchymal stem cell of adipose tissue." [GOC:tfm]
Created by:tmeehan
Creation date:2011-03-01T09:57:17Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000134(mesenchymal cell)
part_of:UBERON:0001013(adipose tissue)



Children


is a:FF:0000270 (mesenchymal precursor cell of adipose)
derives from:FF:0000096 (human mesenchymal stem cell of adipose sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

  • 11217-116B2 (Mesenchymal stem cells - adipose, donor0)
  • 11537-120A7 (Mesenchymal Stem Cells - adipose, donor1)
  • 11617-122A6 (Mesenchymal Stem Cells - adipose, donor2)
  • 11698-123A6 (Mesenchymal Stem Cells - adipose, donor3)
  • 11747-123G1 (mesenchymal precursor cell - adipose, donor1)
  • 11748-123G2 (mesenchymal precursor cell - adipose, donor2)
  • 11749-123G3 (mesenchymal precursor cell - adipose, donor3)
  • 13229-141I7 (mesenchymal stem cells (adipose derived), adipogenic induction)
  • 13230-141I8 (mesenchymal stem cells (adipose derived), adipogenic induction)
  • 13231-141I9 (mesenchymal stem cells (adipose derived), adipogenic induction)

... further results Mouse (Mus musculus)

  • 11217-116B2 (Mesenchymal stem cells - adipose, donor0)
  • 11537-120A7 (Mesenchymal Stem Cells - adipose, donor1)
  • 11617-122A6 (Mesenchymal Stem Cells - adipose, donor2)
  • 11698-123A6 (Mesenchymal Stem Cells - adipose, donor3)
  • 11747-123G1 (mesenchymal precursor cell - adipose, donor1)
  • 11748-123G2 (mesenchymal precursor cell - adipose, donor2)
  • 11749-123G3 (mesenchymal precursor cell - adipose, donor3)
  • 13229-141I7 (mesenchymal stem cells (adipose derived), adipogenic induction)
  • 13230-141I8 (mesenchymal stem cells (adipose derived), adipogenic induction)
  • 13231-141I9 (mesenchymal stem cells (adipose derived), adipogenic induction)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002570 (mesenchymal stem cell of adipose), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
5.68e-55FFCP PHASE1:Hg19::chr21:47405885..47405896,+#_64b5238736f38cf296399b31ecfe88fep@chr21:47405885..47405896, +
5.68e-55FFCP PHASE2:Hg19::chr21:47405885..47405896,+#_64b5238736f38cf296399b31ecfe88fep@chr21:47405885..47405896, +
7.92e-42FFCP PHASE1:Hg19::chr21:47405899..47405911,+#_c943be300507353a9a078de86f2e47cep@chr21:47405899..47405911, +
7.92e-42FFCP PHASE2:Hg19::chr21:47405899..47405911,+#_c943be300507353a9a078de86f2e47cep@chr21:47405899..47405911, +
3.4e-36FFCP PHASE1:Hg19::chr10:17119642..17119662,-#_063d25e80173f86ec6d8cac5ce590be6p2@AK129937
3.4e-36FFCP PHASE2:Hg19::chr10:17119642..17119662,-#_063d25e80173f86ec6d8cac5ce590be6p2@AK129937
3.25e-34FFCP PHASE1:Hg19::chr17:80354807..80354821,+#_f35ba63924371fd19569037cf86e53a9p@chr17:80354807..80354821, +
3.25e-34FFCP PHASE2:Hg19::chr17:80354807..80354821,+#_f35ba63924371fd19569037cf86e53a9p@chr17:80354807..80354821, +
3.92e-31FFCP PHASE2:Hg19::chr21:47403828..47403848,+#_7029c0c41f33d911313fa37fc188fa5ap@chr21:47403828..47403848, +
3.92e-31FFCP PHASE1:Hg19::chr21:47403828..47403848,+#_7029c0c41f33d911313fa37fc188fa5ap@chr21:47403828..47403848, +
1.43e-30FFCP PHASE1:Hg19::chr21:47404148..47404163,+#_96e59f714bebebef11a1f026e962d471p@chr21:47404148..47404163, +
1.43e-30FFCP PHASE2:Hg19::chr21:47404148..47404163,+#_96e59f714bebebef11a1f026e962d471p@chr21:47404148..47404163, +
1.12e-28FFCP PHASE2:Hg19::chr11:27278138..27278178,-#_a4b94e23df8102c5341eb4d4f73db262p@chr11:27278138..27278178, -
1.12e-28FFCP PHASE1:Hg19::chr11:27278138..27278178,-#_a4b94e23df8102c5341eb4d4f73db262p@chr11:27278138..27278178, -
2.04e-25FFCP PHASE1:Hg19::chr3:160099426..160099451,-#_d5486d236378cc2f00e666ba778c43c3p3@IFT80
2.04e-25FFCP PHASE2:Hg19::chr3:160099426..160099451,-#_d5486d236378cc2f00e666ba778c43c3p3@IFT80
8.51e-25FFCP PHASE2:Hg19::chr1:153520959..153520976,-#_8f186b8f732e27d85b24b6e1824a3cddp6@S100A3
8.51e-25FFCP PHASE1:Hg19::chr1:153520959..153520976,-#_8f186b8f732e27d85b24b6e1824a3cddp6@S100A3
1.04e-24FFCP PHASE2:Hg19::chr16:29231538..29231546,-#_a2ed4e6808ac184c69de5c8e0f848a7ep1@AK126407
1.04e-24FFCP PHASE1:Hg19::chr16:29231538..29231546,-#_a2ed4e6808ac184c69de5c8e0f848a7ep1@AK126407
5.24e-24FFCP PHASE2:Hg19::chr3:160099458..160099469,-#_ea21b3e77446de15f0a68beac14ef5afp7@IFT80
5.24e-24FFCP PHASE1:Hg19::chr3:160099458..160099469,-#_ea21b3e77446de15f0a68beac14ef5afp7@IFT80
5.95e-24FFCP PHASE1:Hg19::chr1:114523008..114523020,+#_e2ad6e12c516c90749901558bac5734ap@chr1:114523008..114523020, +
5.95e-24FFCP PHASE2:Hg19::chr1:114523008..114523020,+#_e2ad6e12c516c90749901558bac5734ap@chr1:114523008..114523020, +
2.36e-23FFCP PHASE1:Hg19::chr4:189321881..189321895,+#_5c3ff5d64b9141f588775c410016079ap1@ENST00000512839, p1@ENST00000513313, p1@uc003izo.1
2.36e-23FFCP PHASE2:Hg19::chr4:189321881..189321895,+#_5c3ff5d64b9141f588775c410016079ap1@ENST00000512839, p1@ENST00000513313, p1@uc003izo.1
3.98e-23FFCP PHASE1:Hg19::chr12:53460476..53460481,-#_a10e5837dcf050ae1e470aa4a87923abp2@SPRYD3
3.98e-23FFCP PHASE2:Hg19::chr12:53460476..53460481,-#_a10e5837dcf050ae1e470aa4a87923abp2@SPRYD3
6.93e-23FFCP PHASE1:Hg19::chr6:143212269..143212271,+#_a2fdb3828e8f972a8f470dcf15336b16p@chr6:143212269..143212271, +
6.93e-23FFCP PHASE2:Hg19::chr6:143212269..143212271,+#_a2fdb3828e8f972a8f470dcf15336b16p@chr6:143212269..143212271, +
1.31e-22FFCP PHASE2:Hg19::chrX:133681692..133681696,-#_766792bbb219b9d0a035519fb8bfe0c1p@chrX:133681692..133681696, -
1.31e-22FFCP PHASE1:Hg19::chrX:133681692..133681696,-#_766792bbb219b9d0a035519fb8bfe0c1p@chrX:133681692..133681696, -
4.38e-22FFCP PHASE1:Hg19::chr21:47421929..47421942,+#_c8a6e60e44c65910e92422f6c5ab0121p19@COL6A1
4.38e-22FFCP PHASE2:Hg19::chr21:47421929..47421942,+#_c8a6e60e44c65910e92422f6c5ab0121p19@COL6A1
4.89e-21FFCP PHASE1:Hg19::chr4:189321796..189321823,+#_4904e374f961be67365d5d26d3cf365cp3@ENST00000512839, p3@ENST00000513313, p3@uc003izo.1
4.89e-21FFCP PHASE2:Hg19::chr4:189321796..189321823,+#_4904e374f961be67365d5d26d3cf365cp3@ENST00000512839, p3@ENST00000513313, p3@uc003izo.1
8.98e-21FFCP PHASE1:Hg19::chr12:43506983..43507014,-#_a685d6469df51fc7e05af63b62d93b62p@chr12:43506983..43507014, -
8.98e-21FFCP PHASE2:Hg19::chr12:43506983..43507014,-#_a685d6469df51fc7e05af63b62d93b62p@chr12:43506983..43507014, -
9.92e-21FFCP PHASE1:Hg19::chr1:215157270..215157279,+#_7e289bfa88d2d6669c3e3da6a8231d31p@chr1:215157270..215157279, +
9.92e-21FFCP PHASE1:Hg19::chr21:39678875..39678880,-#_7e289bfa88d2d6669c3e3da6a8231d31p@chr21:39678875..39678880, -
9.92e-21FFCP PHASE2:Hg19::chr1:215157270..215157279,+#_7e289bfa88d2d6669c3e3da6a8231d31p@chr1:215157270..215157279, +
9.92e-21FFCP PHASE2:Hg19::chr21:39678875..39678880,-#_7e289bfa88d2d6669c3e3da6a8231d31p@chr21:39678875..39678880, -
1.33e-20FFCP PHASE1:Hg19::chr19:46894342..46894354,+#_7ccf2d1741ac7679f45e3646b06f7beap@chr19:46894342..46894354, +
1.33e-20FFCP PHASE2:Hg19::chr19:46894342..46894354,+#_7ccf2d1741ac7679f45e3646b06f7beap@chr19:46894342..46894354, +
2.82e-20FFCP PHASE1:Hg19::chr4:189321921..189321935,+#_d20a66081ea0069db532dadd9e45c7f9p4@ENST00000512839, p4@ENST00000513313, p4@uc003izo.1
2.82e-20FFCP PHASE2:Hg19::chr4:189321921..189321935,+#_d20a66081ea0069db532dadd9e45c7f9p4@ENST00000512839, p4@ENST00000513313, p4@uc003izo.1
3.45e-20FFCP PHASE2:Hg19::chr2:28351645..28351666,+#_d9cbc376203f1c136236a7788a2f27c4p@chr2:28351645..28351666, +
3.45e-20FFCP PHASE1:Hg19::chr2:28351645..28351666,+#_d9cbc376203f1c136236a7788a2f27c4p@chr2:28351645..28351666, +
3.66e-20FFCP PHASE1:Hg19::chr3:13610216..13610265,+#_1a009ceaf8ef2ad05244d0012c59f5bap3@FBLN2
3.66e-20FFCP PHASE2:Hg19::chr3:13610216..13610265,+#_1a009ceaf8ef2ad05244d0012c59f5bap3@FBLN2
5.24e-20FFCP PHASE2:Hg19::chr4:189321717..189321731,+#_7f0d2535f19d8a2abb32a3a320eec273p2@ENST00000512839, p2@ENST00000513313, p2@uc003izo.1
5.24e-20FFCP PHASE1:Hg19::chr4:189321717..189321731,+#_7f0d2535f19d8a2abb32a3a320eec273p2@ENST00000512839, p2@ENST00000513313, p2@uc003izo.1
7.29e-20FFCP PHASE2:Hg19::chr8:143694177..143694197,-#_f1058c8db91afcc9a91b1e27cf5a9b1dp@chr8:143694177..143694197, -
7.29e-20FFCP PHASE1:Hg19::chr8:143694177..143694197,-#_f1058c8db91afcc9a91b1e27cf5a9b1dp@chr8:143694177..143694197, -
1.2e-19FFCP PHASE1:Hg19::chr10:101603427..101603446,+#_2b989fd5777293d93025b66d8c6e8fddp@chr10:101603427..101603446, +
1.2e-19FFCP PHASE2:Hg19::chr10:101603427..101603446,+#_2b989fd5777293d93025b66d8c6e8fddp@chr10:101603427..101603446, +
2.0e-19FFCP PHASE1:Hg19::chr2:208104497..208104512,+#_eb71116cfc149bb9806bd172d77f0df8p2@ENST00000430494
2.0e-19FFCP PHASE2:Hg19::chr2:208104497..208104512,+#_eb71116cfc149bb9806bd172d77f0df8p2@ENST00000430494
3.48e-19FFCP PHASE1:Hg19::chr2:28190214..28190227,+#_30436cbe8d94dad6c519234cd0a65606p@chr2:28190214..28190227, +
3.48e-19FFCP PHASE2:Hg19::chr2:28190214..28190227,+#_30436cbe8d94dad6c519234cd0a65606p@chr2:28190214..28190227, +
6.55e-19FFCP PHASE2:Hg19::chr21:47424253..47424260,+#_966d746867fd9119e258519b394f7485p@chr21:47424253..47424260, +
6.55e-19FFCP PHASE1:Hg19::chr21:47424253..47424260,+#_966d746867fd9119e258519b394f7485p@chr21:47424253..47424260, +
2.54e-18FFCP PHASE2:Hg19::chr1:153521571..153521587,-#_b897134b0907a38b1a5d85ac359d2311p3@S100A3
2.54e-18FFCP PHASE1:Hg19::chr1:153521571..153521587,-#_b897134b0907a38b1a5d85ac359d2311p3@S100A3
3.55e-18FFCP PHASE2:Hg19::chr2:216582819..216582824,+#_46334fad634a23948350faba5c77f6bbp1@ENST00000415479
3.55e-18FFCP PHASE1:Hg19::chr2:216582819..216582824,+#_46334fad634a23948350faba5c77f6bbp1@ENST00000415479
5.89e-18FFCP PHASE1:Hg19::chr1:246023808..246023820,-#_dac6c371dc326414f36c958e6fc94dccp@chr1:246023808..246023820, -
5.89e-18FFCP PHASE2:Hg19::chr17:46623900..46623915,+#_dac6c371dc326414f36c958e6fc94dccp2@ENST00000502764
5.89e-18FFCP PHASE2:Hg19::chr1:246023808..246023820,-#_dac6c371dc326414f36c958e6fc94dccp@chr1:246023808..246023820, -
5.89e-18FFCP PHASE1:Hg19::chr17:46623900..46623915,+#_dac6c371dc326414f36c958e6fc94dccp2@ENST00000502764
7.65e-18FFCP PHASE1:Hg19::chr21:39668499..39668519,+#_b0ccd72a6b3ef8eec00739ed32210c38p14@KCNJ15
7.65e-18FFCP PHASE2:Hg19::chr21:39668499..39668519,+#_b0ccd72a6b3ef8eec00739ed32210c38p14@KCNJ15
1.57e-17FFCP PHASE1:Hg19::chr3:71222202..71222216,-#_6ab9902e5ac8c4df488439284df8de84p@chr3:71222202..71222216, -
1.57e-17FFCP PHASE2:Hg19::chr3:71222202..71222216,-#_6ab9902e5ac8c4df488439284df8de84p@chr3:71222202..71222216, -
1.71e-17FFCP PHASE1:Hg19::chr20:48227757..48227759,+#_a0e53304bf63a1ba646b846da38344a3p@chr20:48227757..48227759, +
1.71e-17FFCP PHASE2:Hg19::chr20:48227757..48227759,+#_a0e53304bf63a1ba646b846da38344a3p@chr20:48227757..48227759, +
3.3e-17FFCP PHASE1:Hg19::chr1:161994155..161994179,-#_8e87ecad1a2cd59dae5b46b79f687ad3p@chr1:161994155..161994179, -
3.3e-17FFCP PHASE2:Hg19::chr1:161994155..161994179,-#_8e87ecad1a2cd59dae5b46b79f687ad3p@chr1:161994155..161994179, -
3.95e-17FFCP PHASE2:Hg19::chr1:186277531..186277560,+#_03cab3562c1ce0ee8d9bcb3565346af6p@chr1:186277531..186277560, +
3.95e-17FFCP PHASE1:Hg19::chr1:186277531..186277560,+#_03cab3562c1ce0ee8d9bcb3565346af6p@chr1:186277531..186277560, +
6.28e-17FFCP PHASE1:Hg19::chr21:47423457..47423466,+#_6187cf8ca5f701633bcfe83ae9990b20p@chr21:47423457..47423466, +
6.28e-17FFCP PHASE2:Hg19::chr21:47423457..47423466,+#_6187cf8ca5f701633bcfe83ae9990b20p@chr21:47423457..47423466, +
7.84e-17FFCP PHASE1:Hg19::chr2:47054961..47054993,+#_b4690b0349662bea3f06ccf0f5a97612p1@LOC100134259
7.84e-17FFCP PHASE2:Hg19::chr2:47054961..47054993,+#_b4690b0349662bea3f06ccf0f5a97612p1@LOC100134259
9.57e-17FFCP PHASE1:Hg19::chr21:47545494..47545526,-#_020501cc3fec7225494bf960eb99235dp@chr21:47545494..47545526, -
9.57e-17FFCP PHASE2:Hg19::chr21:47545494..47545526,-#_020501cc3fec7225494bf960eb99235dp@chr21:47545494..47545526, -
9.89e-17FFCP PHASE1:Hg19::chr1:186277564..186277670,+#_b2a3ad7ebb95cf75d99c1f32caad0e46p@chr1:186277564..186277670, +
9.89e-17FFCP PHASE2:Hg19::chr1:186277564..186277670,+#_b2a3ad7ebb95cf75d99c1f32caad0e46p@chr1:186277564..186277670, +
1.02e-16FFCP PHASE1:Hg19::chrX:114253547..114253561,-#_929acb4476362b6318e2709bfc1f09b8p2@IL13RA2
1.02e-16FFCP PHASE2:Hg19::chrX:114253547..114253561,-#_929acb4476362b6318e2709bfc1f09b8p2@IL13RA2
1.49e-16FFCP PHASE2:Hg19::chr12:54402729..54402743,+#_207a87b6ca47240e3300cbfc4cef2563p3@HOXC8
1.49e-16FFCP PHASE1:Hg19::chr12:54402729..54402743,+#_207a87b6ca47240e3300cbfc4cef2563p3@HOXC8
2.07e-16FFCP PHASE1:Hg19::chr21:39668478..39668496,+#_2ee7596e0b74d6db2abf32c15c1a2dcdp11@KCNJ15
2.07e-16FFCP PHASE2:Hg19::chr21:39668478..39668496,+#_2ee7596e0b74d6db2abf32c15c1a2dcdp11@KCNJ15
4.27e-16FFCP PHASE2:Hg19::chr21:47424604..47424616,+#_5a6463939d0712807b33175594d2416dp@chr21:47424604..47424616, +
4.27e-16FFCP PHASE1:Hg19::chr21:47424604..47424616,+#_5a6463939d0712807b33175594d2416dp@chr21:47424604..47424616, +
6.01e-16FFCP PHASE2:Hg19::chr2:238187300..238187323,-#_400e39d694e6f8c49d98f367c7850021p@chr2:238187300..238187323, -
6.01e-16FFCP PHASE1:Hg19::chr2:238187300..238187323,-#_400e39d694e6f8c49d98f367c7850021p@chr2:238187300..238187323, -
7.36e-16FFCP PHASE2:Hg19::chr1:16355004..16355024,+#_9aca79ee7fc01a17570363a433959afcp1@CLCNKA
7.36e-16FFCP PHASE1:Hg19::chr1:16355004..16355024,+#_9aca79ee7fc01a17570363a433959afcp1@CLCNKA