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CL:0002605

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Name:astrocyte of the cerebral cortex
Namespace:FANTOM
Definition:"An astrocyte of the cerebral cortex." [GOC:tfm]
Created by:tmeehan
Creation date:2011-03-06T06:57:36Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data

Parents

is_a:CL:0012000(astrocyte of the forebrain),CL:1001579(cerebral cortex glial cell)
part_of:UBERON:0000956(cerebral cortex)



Children


derives from:FF:0000194 (human astrocyte of the cerebral cortex sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002605 (astrocyte of the cerebral cortex), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data

P-valueFFCPShort description
2.79e-195FFCP PHASE2:Hg19::chr9:122602283..122602290,-#_9af87a90ffb30d85c2c0d37fd17ea96ap@chr9:122602283..122602290, -
2.79e-195FFCP PHASE1:Hg19::chr9:122602283..122602290,-#_9af87a90ffb30d85c2c0d37fd17ea96ap@chr9:122602283..122602290, -
8.98e-131FFCP PHASE2:Hg19::chr8:32488262..32488265,+#_907b7fa2f70f494c907566ca43924c91p@chr8:32488262..32488265, +
8.98e-131FFCP PHASE1:Hg19::chr8:32488262..32488265,+#_907b7fa2f70f494c907566ca43924c91p@chr8:32488262..32488265, +
3.48e-118FFCP PHASE2:Hg19::chr7:42192092..42192108,-#_6ecc9e18c048ac0bfef1df86023d4e51p13@GLI3
3.48e-118FFCP PHASE1:Hg19::chr7:42192092..42192108,-#_6ecc9e18c048ac0bfef1df86023d4e51p13@GLI3
7.78e-118FFCP PHASE2:Hg19::chr4:169553987..169553999,+#_5149c712f719a09789019cfc4b64388cp@chr4:169553987..169553999, +
7.78e-118FFCP PHASE1:Hg19::chr4:169553987..169553999,+#_5149c712f719a09789019cfc4b64388cp@chr4:169553987..169553999, +
1.16e-117FFCP PHASE1:Hg19::chr20:35856764..35856768,+#_226832821782c1e7a9547a70a9d4ad48p25@RPN2
1.16e-117FFCP PHASE2:Hg19::chr20:35856764..35856768,+#_226832821782c1e7a9547a70a9d4ad48p25@RPN2
2.59e-117FFCP PHASE2:Hg19::chr14:33403217..33403226,+#_56e00156059fc78bec079484535eb0fap@chr14:33403217..33403226, +
2.59e-117FFCP PHASE1:Hg19::chr14:33403217..33403226,+#_56e00156059fc78bec079484535eb0fap@chr14:33403217..33403226, +
1.11e-98FFCP PHASE1:Hg19::chr9:127025189..127025200,+#_beca657f4c96c31bb4e93f95811418a4p1@ENST00000437461
1.11e-98FFCP PHASE2:Hg19::chr9:127025189..127025200,+#_beca657f4c96c31bb4e93f95811418a4p1@ENST00000437461
1.55e-98FFCP PHASE2:Hg19::chr2:104096987..104096993,-#_a53185a19cf3122b255a4448601fa00ap@chr2:104096987..104096993, -
1.55e-98FFCP PHASE2:Hg19::chr13:99349888..99349893,+#_a53185a19cf3122b255a4448601fa00ap@chr13:99349888..99349893, +
1.55e-98FFCP PHASE1:Hg19::chr2:104096987..104096993,-#_a53185a19cf3122b255a4448601fa00ap@chr2:104096987..104096993, -
1.55e-98FFCP PHASE1:Hg19::chr13:99349888..99349893,+#_a53185a19cf3122b255a4448601fa00ap@chr13:99349888..99349893, +
1.87e-86FFCP PHASE2:Mm9::chr9:122478206..122478208,+#_61a344364b98374db25abbc4f43be7d1p@chr9:122478206..122478208, +
1.87e-86FFCP PHASE1:Mm9::chr9:122478206..122478208,+#_61a344364b98374db25abbc4f43be7d1p@chr9:122478206..122478208, +
1.87e-86FFCP PHASE1:Mm9::chr1:72827387..72827393,-#_61a344364b98374db25abbc4f43be7d1p@chr1:72827387..72827393, -
1.87e-86FFCP PHASE2:Mm9::chr1:72827387..72827393,-#_61a344364b98374db25abbc4f43be7d1p@chr1:72827387..72827393, -
9.61e-85FFCP PHASE1:Hg19::chr18:59139514..59139535,+#_1b12f62ba3e92fcc6bcb8b895cf599aap@chr18:59139514..59139535, +
9.61e-85FFCP PHASE2:Hg19::chr18:59139514..59139535,+#_1b12f62ba3e92fcc6bcb8b895cf599aa+, p@chr18:59139514..59139535
6.07e-75FFCP PHASE1:Hg19::chr17:42988599..42988605,-#_b16853a8dfbdfa621295772c2a7e9d28p46@GFAP
6.07e-75FFCP PHASE2:Hg19::chr17:42988599..42988605,-#_b16853a8dfbdfa621295772c2a7e9d28p46@GFAP
2.14e-74FFCP PHASE1:Hg19::chr18:56248051..56248065,-#_8e44abeb4ff7cc62578081329110e8aep@chr18:56248051..56248065, -
2.14e-74FFCP PHASE2:Hg19::chr18:56248051..56248065,-#_8e44abeb4ff7cc62578081329110e8aep@chr18:56248051..56248065, -
7.85e-67FFCP PHASE2:Hg19::chr4:169553961..169553972,+#_a7c8a953625fc55f13be9377e1032381p@chr4:169553961..169553972, +
7.85e-67FFCP PHASE1:Hg19::chr4:169553961..169553972,+#_a7c8a953625fc55f13be9377e1032381+, p@chr4:169553961..169553972
9.82e-67FFCP PHASE1:Hg19::chr1:98518907..98518920,+#_330a4f6d944935b385324b3234495f7cp@chr1:98518907..98518920, +
9.82e-67FFCP PHASE2:Hg19::chr1:98518907..98518920,+#_330a4f6d944935b385324b3234495f7cp@chr1:98518907..98518920, +
1.54e-66FFCP PHASE1:Hg19::chr1:98642833..98642844,+#_a04a882039e18906f5ccc49e75b4cce5p@chr1:98642833..98642844, +
1.54e-66FFCP PHASE2:Hg19::chr1:98642833..98642844,+#_a04a882039e18906f5ccc49e75b4cce5p@chr1:98642833..98642844, +
2.39e-66FFCP PHASE1:Hg19::chr1:19212524..19212526,-#_0ef43b83c955ed65639f4caca7f88a9dp6@ALDH4A1
2.39e-66FFCP PHASE2:Hg19::chr1:19212524..19212526,-#_0ef43b83c955ed65639f4caca7f88a9dp6@ALDH4A1
4.68e-66FFCP PHASE2:Hg19::chr21:17566746..17566756,+#_233ef4973150d4d0474fa379b7de9524p35@LINC00478
4.68e-66FFCP PHASE1:Hg19::chr21:17566746..17566756,+#_233ef4973150d4d0474fa379b7de9524p35@LINC00478
1.15e-65FFCP PHASE2:Hg19::chr17:76266212..76266222,-#_74c2e7486c5c9ea650a389a54e909383p@chr17:76266212..76266222, -
1.15e-65FFCP PHASE1:Hg19::chr17:76266212..76266222,-#_74c2e7486c5c9ea650a389a54e909383p@chr17:76266212..76266222, -
1.22e-59FFCP PHASE2:Hg19::chr20:20472232..20472244,-#_78938434be8f92c892d02b5fb330431dp@chr20:20472232..20472244, -
1.22e-59FFCP PHASE1:Hg19::chr20:20472232..20472244,-#_78938434be8f92c892d02b5fb330431dp@chr20:20472232..20472244, -
2.23e-59FFCP PHASE1:Hg19::chr5:135540733..135540788,-#_453bd04b20e4dde95a2559bda90d0f2fp@chr5:135540733..135540788, -
2.23e-59FFCP PHASE2:Hg19::chr5:135540733..135540788,-#_453bd04b20e4dde95a2559bda90d0f2fp@chr5:135540733..135540788, -
1.68e-58FFCP PHASE1:Mm9::chr11:66340488..66340520,-#_af073de32d751f16f9e423c3f72e0dcdp@chr11:66340488..66340520, -
1.68e-58FFCP PHASE2:Mm9::chr12:86222392..86222395,-#_af073de32d751f16f9e423c3f72e0dcdp@chr12:86222392..86222395, -
1.68e-58FFCP PHASE2:Mm9::chr6:84135739..84135768,+#_af073de32d751f16f9e423c3f72e0dcdp@chr6:84135739..84135768, +
1.68e-58FFCP PHASE2:Mm9::chr11:66340488..66340520,-#_af073de32d751f16f9e423c3f72e0dcdp@chr11:66340488..66340520, -
1.68e-58FFCP PHASE2:Mm9::chr1:169619239..169619257,+#_af073de32d751f16f9e423c3f72e0dcdp4@Lmx1a
1.68e-58FFCP PHASE1:Mm9::chr16:15895817..15895825,-#_af073de32d751f16f9e423c3f72e0dcdp@chr16:15895817..15895825, -
1.68e-58FFCP PHASE2:Mm9::chr1:135936902..135936908,+#_af073de32d751f16f9e423c3f72e0dcdp@chr1:135936902..135936908, +
1.68e-58FFCP PHASE1:Mm9::chr12:86222392..86222395,-#_af073de32d751f16f9e423c3f72e0dcdp@chr12:86222392..86222395, -
1.68e-58FFCP PHASE1:Mm9::chr6:84135739..84135768,+#_af073de32d751f16f9e423c3f72e0dcdp@chr6:84135739..84135768, +
1.68e-58FFCP PHASE1:Mm9::chr1:135936902..135936908,+#_af073de32d751f16f9e423c3f72e0dcdp@chr1:135936902..135936908, +
1.68e-58FFCP PHASE2:Mm9::chr16:15895817..15895825,-#_af073de32d751f16f9e423c3f72e0dcdp@chr16:15895817..15895825, -
1.68e-58FFCP PHASE1:Mm9::chr1:169619239..169619257,+#_af073de32d751f16f9e423c3f72e0dcdp4@Lmx1a
1.68e-58FFCP PHASE2:Mm9::chr14:70592586..70592593,-#_af073de32d751f16f9e423c3f72e0dcdp@chr14:70592586..70592593, -
1.68e-58FFCP PHASE1:Mm9::chr14:70592586..70592593,-#_af073de32d751f16f9e423c3f72e0dcdp@chr14:70592586..70592593, -
2.88e-55FFCP PHASE1:Hg19::chr1:98518880..98518891,+#_ad872051f5c138dcdc13071dc5034eb8p@chr1:98518880..98518891, +
2.88e-55FFCP PHASE2:Hg19::chr1:98518880..98518891,+#_ad872051f5c138dcdc13071dc5034eb8p@chr1:98518880..98518891, +
4.17e-55FFCP PHASE2:Hg19::chr11:35125088..35125100,-#_a6de29737a98c5e6af8d71aaa1c56c6cp@chr11:35125088..35125100, -
4.17e-55FFCP PHASE1:Hg19::chr11:35125088..35125100,-#_a6de29737a98c5e6af8d71aaa1c56c6cp@chr11:35125088..35125100, -
7.24e-55FFCP PHASE2:Hg19::chr2:104490710..104490719,+#_5908d39cdef71a103d142a462406e126p2@ENST00000537492
7.24e-55FFCP PHASE1:Hg19::chr2:104490710..104490719,+#_5908d39cdef71a103d142a462406e126p2@ENST00000537492
3.76e-54FFCP PHASE2:Hg19::chr11:30605486..30605499,-#_5adfa352ce938f45eff0f863ce60380bp@chr11:30605486..30605499, -
3.76e-54FFCP PHASE1:Hg19::chr11:30605486..30605499,-#_5adfa352ce938f45eff0f863ce60380bp@chr11:30605486..30605499, -
3.75e-53FFCP PHASE2:Hg19::chr14:33403278..33403307,+#_5dd821ad6b1bd387bdba3e8700bad0a5p@chr14:33403278..33403307, +
3.75e-53FFCP PHASE1:Hg19::chr14:33403278..33403307,+#_5dd821ad6b1bd387bdba3e8700bad0a5p@chr14:33403278..33403307, +
1.89e-50FFCP PHASE2:Hg19::chr3:155422705..155422719,-#_4c281a3a2b5cfd1bccadc7f6b2f60c17p@chr3:155422705..155422719, -
1.89e-50FFCP PHASE1:Hg19::chr3:155422705..155422719,-#_4c281a3a2b5cfd1bccadc7f6b2f60c17p@chr3:155422705..155422719, -
3.7e-50FFCP PHASE2:Hg19::chr8:38260028..38260044,+#_a18c787104fd97f1301b50256b5f2211p@chr8:38260028..38260044, +
3.7e-50FFCP PHASE1:Hg19::chr8:38260028..38260044,+#_a18c787104fd97f1301b50256b5f2211p@chr8:38260028..38260044, +
1.67e-49FFCP PHASE2:Hg19::chr5:58295564..58295588,-#_ad6316ab12aa3e0613ee00a16d1e1b3ap59@PDE4D
1.67e-49FFCP PHASE2:Hg19::chr11:36127154..36127161,+#_ad6316ab12aa3e0613ee00a16d1e1b3ap@chr11:36127154..36127161, +
1.67e-49FFCP PHASE1:Hg19::chr11:36127154..36127161,+#_ad6316ab12aa3e0613ee00a16d1e1b3ap@chr11:36127154..36127161, +
1.67e-49FFCP PHASE1:Hg19::chr5:58295564..58295588,-#_ad6316ab12aa3e0613ee00a16d1e1b3ap59@PDE4D
1.03e-46FFCP PHASE2:Hg19::chr16:19297074..19297103,+#_1ba75d74f1d36acd043cd17f2a4e044ap1@CLEC19A
1.03e-46FFCP PHASE1:Hg19::chr16:19297074..19297103,+#_1ba75d74f1d36acd043cd17f2a4e044ap1@CLEC19A
1.65e-46FFCP PHASE1:Hg19::chr2:48919725..48919761,+#_2cf327b1a5fe9ce98f275b09ca87670ap@chr2:48919725..48919761, +
1.65e-46FFCP PHASE2:Hg19::chr2:48919725..48919761,+#_2cf327b1a5fe9ce98f275b09ca87670ap@chr2:48919725..48919761, +
4.17e-46FFCP PHASE2:Hg19::chr8:32604401..32604404,+#_2623fb0dd8965c14a15b6d90f319b69dp@chr8:32604401..32604404, +
4.17e-46FFCP PHASE1:Hg19::chr8:32604401..32604404,+#_2623fb0dd8965c14a15b6d90f319b69dp@chr8:32604401..32604404, +
7.81e-45FFCP PHASE1:Hg19::chr18:59139537..59139552,+#_8617ebd0f23b5404d1ceb1f5abed0551p@chr18:59139537..59139552, +
7.81e-45FFCP PHASE2:Hg19::chr18:59139537..59139552,+#_8617ebd0f23b5404d1ceb1f5abed0551p@chr18:59139537..59139552, +
1.22e-44FFCP PHASE2:Hg19::chr12:41374792..41374806,+#_1b0d2a1dcd38e68c4e4d5b5ab40d5e54p@chr12:41374792..41374806, +
1.22e-44FFCP PHASE1:Hg19::chr12:41374792..41374806,+#_1b0d2a1dcd38e68c4e4d5b5ab40d5e54p@chr12:41374792..41374806, +
1.66e-44FFCP PHASE2:Mm9::chr1:135937391..135937415,+#_4a112d491a254c374d0aca8bfe971bf2p@chr1:135937391..135937415, +
1.66e-44FFCP PHASE2:Mm9::chr2:38207200..38207210,+#_4a112d491a254c374d0aca8bfe971bf2p13@Lhx2
1.66e-44FFCP PHASE1:Mm9::chr1:135937391..135937415,+#_4a112d491a254c374d0aca8bfe971bf2p@chr1:135937391..135937415, +
1.66e-44FFCP PHASE1:Mm9::chr7:149885426..149885434,-#_4a112d491a254c374d0aca8bfe971bf2p2@Ins2
1.66e-44FFCP PHASE1:Mm9::chr2:38207200..38207210,+#_4a112d491a254c374d0aca8bfe971bf2p13@Lhx2
1.66e-44FFCP PHASE2:Mm9::chr9:43915826..43915844,+#_4a112d491a254c374d0aca8bfe971bf2p@chr9:43915826..43915844, +
1.66e-44FFCP PHASE1:Mm9::chr9:43915826..43915844,+#_4a112d491a254c374d0aca8bfe971bf2p@chr9:43915826..43915844, +
1.66e-44FFCP PHASE2:Mm9::chr7:149885426..149885434,-#_4a112d491a254c374d0aca8bfe971bf2p2@Ins2
2.75e-44FFCP PHASE2:Mm9::chr17:26758457..26758466,+#_2393f51fb2f98acd8c0885c5c0d52b29p10@Ergic1
2.75e-44FFCP PHASE2:Mm9::chr1:135808073..135808085,-#_2393f51fb2f98acd8c0885c5c0d52b29p@chr1:135808073..135808085, -
2.75e-44FFCP PHASE1:Mm9::chr1:135808073..135808085,-#_2393f51fb2f98acd8c0885c5c0d52b29p@chr1:135808073..135808085, -
2.75e-44FFCP PHASE1:Mm9::chr17:26758457..26758466,+#_2393f51fb2f98acd8c0885c5c0d52b29p10@Ergic1
2.97e-44FFCP PHASE1:Hg19::chr8:32436735..32436738,+#_70cc345f609dabdba6edf59451c8724cp@chr8:32436735..32436738, +
2.97e-44FFCP PHASE2:Hg19::chr8:32436735..32436738,+#_70cc345f609dabdba6edf59451c8724c+, p@chr8:32436735..32436738

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