Personal tools

CL:1000500

From FANTOM5_SSTAR

Jump to: navigation, search
Name:kidney interstitial cell
Namespace:cell
Xrefs:
links:
KUPO:0001013


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0002320(connective tissue cell),CL:1000497(kidney cell)
part_of:UBERON:0005215(kidney interstitium)



Children


is a:CL:0002173 (extraglomerular mesangial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:1000500 (kidney interstitial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.34e-79FFCP PHASE2:Hg19::chr2:133426030..133426041,-#_c3b9a7e6a6427a4999ef412432f99fe5p@chr2:133426030..133426041, -
2.34e-79FFCP PHASE1:Hg19::chr2:133426030..133426041,-#_c3b9a7e6a6427a4999ef412432f99fe5p@chr2:133426030..133426041, -
3.49e-79FFCP PHASE1:Hg19::chr1:51791596..51791607,-#_e10a52b099dc5fb96bd41239cad4e42bp23@TTC39A
3.49e-79FFCP PHASE2:Hg19::chr1:51791596..51791607,-#_e10a52b099dc5fb96bd41239cad4e42bp23@TTC39A
2.03e-66FFCP PHASE1:Hg19::chr2:133426106..133426117,-#_7e2bd5568f7221c939619806c48fc55ep@chr2:133426106..133426117, -
2.03e-66FFCP PHASE2:Hg19::chr2:133426106..133426117,-#_7e2bd5568f7221c939619806c48fc55ep@chr2:133426106..133426117, -
1.46e-50FFCP PHASE2:Hg19::chr10:134535354..134535366,-#_82e48a7d1688e3cb70afc55442afe0edp@chr10:134535354..134535366, -
1.46e-50FFCP PHASE2:Hg19::chr10:102495136..102495146,+#_82e48a7d1688e3cb70afc55442afe0edp8@PAX2
1.46e-50FFCP PHASE1:Hg19::chr10:134535354..134535366,-#_82e48a7d1688e3cb70afc55442afe0edp@chr10:134535354..134535366, -
1.46e-50FFCP PHASE1:Hg19::chr10:102495136..102495146,+#_82e48a7d1688e3cb70afc55442afe0edp8@PAX2
3.11e-50FFCP PHASE1:Hg19::chr17:17480803..17480814,-#_8c26d1055503ba1a81f9556311a33a3ap19@PEMT
3.11e-50FFCP PHASE2:Hg19::chr17:17480803..17480814,-#_8c26d1055503ba1a81f9556311a33a3ap19@PEMT
4.52e-50FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_91cd6e8eb2e0fde9404b3e55b7ec4e6ep10@PAX2
4.52e-50FFCP PHASE2:Hg19::chr9:81641483..81641491,-#_91cd6e8eb2e0fde9404b3e55b7ec4e6ep@chr9:81641483..81641491, -
4.52e-50FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_91cd6e8eb2e0fde9404b3e55b7ec4e6ep10@PAX2
4.52e-50FFCP PHASE1:Hg19::chr9:81641483..81641491,-#_91cd6e8eb2e0fde9404b3e55b7ec4e6ep@chr9:81641483..81641491, -
8.98e-41FFCP PHASE1:Hg19::chr17:171082..171101,+#_8503aaec11214464a8f087a1bf3dedd0p@chr17:171082..171101, +
8.98e-41FFCP PHASE2:Hg19::chr17:171082..171101,+#_8503aaec11214464a8f087a1bf3dedd0p@chr17:171082..171101, +
1.1e-40FFCP PHASE2:Hg19::chr3:172384246..172384250,+#_c3e06993d727e720a32a4f4bfc9be84ep@chr3:172384246..172384250, +
1.1e-40FFCP PHASE1:Hg19::chr3:172384246..172384250,+#_c3e06993d727e720a32a4f4bfc9be84ep@chr3:172384246..172384250, +
1.64e-40FFCP PHASE2:Hg19::chr1:45087902..45087912,+#_bf73ff6de0b88183a094bcb802d3f414p@chr1:45087902..45087912, +
1.64e-40FFCP PHASE1:Hg19::chr1:45087902..45087912,+#_bf73ff6de0b88183a094bcb802d3f414p@chr1:45087902..45087912, +
3.68e-40FFCP PHASE1:Hg19::chr10:102505552..102505563,+#_d72e062ab3be0ed2ed8ebf515af46d04p5@PAX2
3.68e-40FFCP PHASE2:Hg19::chr10:102505552..102505563,+#_d72e062ab3be0ed2ed8ebf515af46d04p5@PAX2
8.2e-37FFCP PHASE2:Hg19::chr10:102505312..102505320,+#_8d5901824b29f3eafcf6a7845c2f9bdbp6@PAX2
8.2e-37FFCP PHASE1:Hg19::chr10:102505312..102505320,+#_8d5901824b29f3eafcf6a7845c2f9bdbp6@PAX2
9.84e-37FFCP PHASE1:Hg19::chr9:126131131..126131159,+#_7cf5e55e825c8155e227e4a395ed51b6p3@CRB2
9.84e-37FFCP PHASE2:Hg19::chr9:126131131..126131159,+#_7cf5e55e825c8155e227e4a395ed51b6p3@CRB2
6.0e-34FFCP PHASE1:Hg19::chr2:113984760..113984792,+#_d3340702e1bbde9a2da9853d2121ce38p@chr2:113984760..113984792, +
6.0e-34FFCP PHASE2:Hg19::chr2:113984760..113984792,+#_d3340702e1bbde9a2da9853d2121ce38p@chr2:113984760..113984792, +
7.05e-34FFCP PHASE2:Hg19::chr7:27164585..27164612,-#_deb14192edfbaef73baf2d8a31fa4e29p@chr7:27164585..27164612, -
7.05e-34FFCP PHASE1:Hg19::chr11:555661..555679,+#_deb14192edfbaef73baf2d8a31fa4e29p@chr11:555661..555679, +
7.05e-34FFCP PHASE1:Hg19::chr1:858638..858648,+#_deb14192edfbaef73baf2d8a31fa4e29p@chr1:858638..858648, +
7.05e-34FFCP PHASE1:Hg19::chr7:27164585..27164612,-#_deb14192edfbaef73baf2d8a31fa4e29p@chr7:27164585..27164612, -
7.05e-34FFCP PHASE2:Hg19::chr11:555661..555679,+#_deb14192edfbaef73baf2d8a31fa4e29p@chr11:555661..555679, +
7.05e-34FFCP PHASE2:Hg19::chr1:858638..858648,+#_deb14192edfbaef73baf2d8a31fa4e29p@chr1:858638..858648, +
8.39e-34FFCP PHASE2:Hg19::chr10:73848549..73848564,-#_5afe2af7993c74370ecd357485a0108cp13@SPOCK2
8.39e-34FFCP PHASE1:Hg19::chr10:73848549..73848564,-#_5afe2af7993c74370ecd357485a0108cp13@SPOCK2
1.17e-33FFCP PHASE1:Hg19::chr11:118477144..118477156,+#_6216b6634d79ade15b8dc153ef5d703cp25@PHLDB1
1.17e-33FFCP PHASE2:Hg19::chr11:118477144..118477156,+#_6216b6634d79ade15b8dc153ef5d703cp25@PHLDB1
3.35e-32FFCP PHASE1:Hg19::chr2:693362..693373,+#_51d5a84cd772235cbaf4c7eb21366385p@chr2:693362..693373, +
3.35e-32FFCP PHASE2:Hg19::chr2:693362..693373,+#_51d5a84cd772235cbaf4c7eb21366385p@chr2:693362..693373, +
2.54e-31FFCP PHASE2:Hg19::chrX:106146562..106146577,-#_fcd91ebc5353b9b7183fdfd4460c5510p1@RIPPLY1
2.54e-31FFCP PHASE1:Hg19::chrX:106146562..106146577,-#_fcd91ebc5353b9b7183fdfd4460c5510p1@RIPPLY1
8.05e-30FFCP PHASE1:Hg19::chr17:171147..171161,+#_36684d8fa2b667ebb928359c50189af7p@chr17:171147..171161, +
8.05e-30FFCP PHASE2:Hg19::chr17:171147..171161,+#_36684d8fa2b667ebb928359c50189af7p@chr17:171147..171161, +
2.96e-29FFCP PHASE1:Hg19::chr2:165477405..165477418,-#_4faaec13ad2b8ea9c8751a7d88db4b2cp@chr2:165477405..165477418, -
2.96e-29FFCP PHASE2:Hg19::chr2:165477405..165477418,-#_4faaec13ad2b8ea9c8751a7d88db4b2cp@chr2:165477405..165477418, -
4.55e-29FFCP PHASE2:Hg19::chr1:874109..874143,+#_ab5e6a93534de52c7a164ab33fcba55cp@chr1:874109..874143, +
4.55e-29FFCP PHASE1:Hg19::chr1:874109..874143,+#_ab5e6a93534de52c7a164ab33fcba55cp@chr1:874109..874143, +
1.43e-28FFCP PHASE1:Hg19::chr2:113999199..113999214,+#_fbbc92f98da2d38fdc21b4d9a05b1ebdp@chr2:113999199..113999214, +
1.43e-28FFCP PHASE2:Hg19::chr2:113999199..113999214,+#_fbbc92f98da2d38fdc21b4d9a05b1ebdp@chr2:113999199..113999214, +
1.83e-27FFCP PHASE2:Hg19::chr20:6034598..6034603,-#_7a4775fe46fe97cb701c7db1371029a0p7@LRRN4
1.83e-27FFCP PHASE2:Hg19::chr16:86604624..86604648,+#_7a4775fe46fe97cb701c7db1371029a0p@chr16:86604624..86604648, +
1.83e-27FFCP PHASE1:Hg19::chr16:86604624..86604648,+#_7a4775fe46fe97cb701c7db1371029a0p@chr16:86604624..86604648, +
1.83e-27FFCP PHASE1:Hg19::chr20:6034598..6034603,-#_7a4775fe46fe97cb701c7db1371029a0p7@LRRN4
2.74e-27FFCP PHASE1:Hg19::chr19:56091499..56091517,-#_f21a3453578f2381af9ba68a9f0dee04p@chr19:56091499..56091517, -
2.74e-27FFCP PHASE2:Hg19::chr19:56091499..56091517,-#_f21a3453578f2381af9ba68a9f0dee04p@chr19:56091499..56091517, -
2.78e-26FFCP PHASE1:Hg19::chr9:112260040..112260045,+#_07b7e31e4881771226653e076a911baap@chr9:112260040..112260045, +
2.78e-26FFCP PHASE2:Hg19::chr9:112260040..112260045,+#_07b7e31e4881771226653e076a911baap@chr9:112260040..112260045, +
4.63e-26FFCP PHASE2:Hg19::chr22:30645170..30645182,-#_a37d47411161b1e181967557ebb5a36cp@chr22:30645170..30645182, -
4.63e-26FFCP PHASE1:Hg19::chr22:30645170..30645182,-#_a37d47411161b1e181967557ebb5a36cp@chr22:30645170..30645182, -
7.14e-26FFCP PHASE1:Hg19::chr8:22419319..22419327,+#_875e7a478dfbc1b145214d8609357bf5p@chr8:22419319..22419327, +
7.14e-26FFCP PHASE2:Hg19::chr8:22419319..22419327,+#_875e7a478dfbc1b145214d8609357bf5p@chr8:22419319..22419327, +
9.18e-26FFCP PHASE1:Hg19::chr17:15555143..15555150,-#_834aca48347fa1ff39c97e2288201605p12@TRIM16
9.18e-26FFCP PHASE2:Hg19::chr8:28196820..28196830,+#_834aca48347fa1ff39c97e2288201605p@chr8:28196820..28196830, +
9.18e-26FFCP PHASE2:Hg19::chr2:176973165..176973169,-#_834aca48347fa1ff39c97e2288201605p@chr2:176973165..176973169, -
9.18e-26FFCP PHASE2:Hg19::chr20:6031540..6031548,-#_834aca48347fa1ff39c97e2288201605p@chr20:6031540..6031548, -
9.18e-26FFCP PHASE2:Hg19::chr10:102505946..102505949,+#_834aca48347fa1ff39c97e2288201605p14@PAX2
9.18e-26FFCP PHASE1:Hg19::chr6:31833005..31833017,-#_834aca48347fa1ff39c97e2288201605p@chr6:31833005..31833017, -
9.18e-26FFCP PHASE2:Hg19::chr11:32457397..32457404,-#_834aca48347fa1ff39c97e2288201605p15@WT1
9.18e-26FFCP PHASE2:Hg19::chr17:15555143..15555150,-#_834aca48347fa1ff39c97e2288201605p12@TRIM16
9.18e-26FFCP PHASE1:Hg19::chr8:28196820..28196830,+#_834aca48347fa1ff39c97e2288201605p@chr8:28196820..28196830, +
9.18e-26FFCP PHASE1:Hg19::chr2:176973165..176973169,-#_834aca48347fa1ff39c97e2288201605p@chr2:176973165..176973169, -
9.18e-26FFCP PHASE1:Hg19::chr10:102505946..102505949,+#_834aca48347fa1ff39c97e2288201605p14@PAX2
9.18e-26FFCP PHASE1:Hg19::chr20:6031540..6031548,-#_834aca48347fa1ff39c97e2288201605p@chr20:6031540..6031548, -
9.18e-26FFCP PHASE1:Hg19::chr11:32457397..32457404,-#_834aca48347fa1ff39c97e2288201605p15@WT1
9.18e-26FFCP PHASE2:Hg19::chr6:31833005..31833017,-#_834aca48347fa1ff39c97e2288201605p@chr6:31833005..31833017, -
2.37e-25FFCP PHASE1:Hg19::chr7:27160553..27160560,+#_20952ba8a83e0f9d4778bb3b8a1d2255p1@ENST00000523364, p1@uc010kux.1
2.37e-25FFCP PHASE2:Hg19::chr7:27160553..27160560,+#_20952ba8a83e0f9d4778bb3b8a1d2255p1@ENST00000523364, p1@uc010kux.1
4.38e-25FFCP PHASE1:Hg19::chr7:27219754..27219759,-#_07c0f124554c0580fc21dd77615396abp16@HOXA10
4.38e-25FFCP PHASE2:Hg19::chr7:27219754..27219759,-#_07c0f124554c0580fc21dd77615396abp16@HOXA10
4.43e-25FFCP PHASE1:Hg19::chr1:149908263..149908281,-#_a0550fd9771a1ecc6afd421c0d9473f2p6@MTMR11
4.43e-25FFCP PHASE2:Hg19::chr1:149908263..149908281,-#_a0550fd9771a1ecc6afd421c0d9473f2p6@MTMR11
7.09e-25FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_c167a93f1fd811e40606f38e34512a7ep4@PAX2
7.09e-25FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_c167a93f1fd811e40606f38e34512a7ep4@PAX2
3.76e-24FFCP PHASE2:Hg19::chr1:46797583..46797614,-#_c8f3be3c7cb573c5ee7d0cd1475b73bcp@chr1:46797583..46797614, -
3.76e-24FFCP PHASE1:Hg19::chr1:46797583..46797614,-#_c8f3be3c7cb573c5ee7d0cd1475b73bcp@chr1:46797583..46797614, -
7.62e-24FFCP PHASE2:Hg19::chr6:94129519..94129544,+#_c82a2b988df1aa1dff1d288a781033dap@chr6:94129519..94129544, +
7.62e-24FFCP PHASE1:Hg19::chr6:94129519..94129544,+#_c82a2b988df1aa1dff1d288a781033dap@chr6:94129519..94129544, +
8.02e-24FFCP PHASE1:Hg19::chr2:693380..693398,+#_e49a255f83c255a0a3d1af281b2859b8p@chr2:693380..693398, +
8.02e-24FFCP PHASE2:Hg19::chr2:693380..693398,+#_e49a255f83c255a0a3d1af281b2859b8p@chr2:693380..693398, +
8.98e-24FFCP PHASE2:Hg19::chr2:133426077..133426103,-#_43a33643cf9eb1a1c6df8a8334bc2c51p@chr2:133426077..133426103, -
8.98e-24FFCP PHASE1:Hg19::chr2:133426077..133426103,-#_43a33643cf9eb1a1c6df8a8334bc2c51p@chr2:133426077..133426103, -
1.99e-23FFCP PHASE2:Hg19::chr11:32457350..32457361,+#_66dec1592438fe26d9f9cd690348be89p5@WT1-AS
1.99e-23FFCP PHASE1:Hg19::chr11:32457350..32457361,+#_66dec1592438fe26d9f9cd690348be89p5@WT1-AS
4.37e-23FFCP PHASE2:Hg19::chr2:176968471..176968476,-#_9d5ae59b1558cf10a516cf3e9d993902p@chr2:176968471..176968476, -
4.37e-23FFCP PHASE1:Hg19::chr2:176968471..176968476,-#_9d5ae59b1558cf10a516cf3e9d993902p@chr2:176968471..176968476, -
4.89e-23FFCP PHASE2:Hg19::chr12:15592437..15592438,+#_c9f9eeb598e3033c44915284e09b982ap1@ENST00000469884
4.89e-23FFCP PHASE1:Hg19::chr12:15592437..15592438,+#_c9f9eeb598e3033c44915284e09b982ap1@ENST00000469884

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:1000500&oldid=1837232"