DOID:0060084
From FANTOM5_SSTAR
Name: | cell type benign neoplasm |
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Namespace: | FANTOM |
Definition: | "A benign neoplasm that is classified by the type of cell or tissue from which it is derived." [url:http://en.wikipedia.org/wiki/Benign_tumor] |
Created by: | lschriml |
Creation date: | 2011-07-14T11:59:48Z |
Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.
link to ontology dataset
data
Parents
is_a: | DOID:0060072(benign neoplasm) |
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Children
is a: | DOID:127 (leiomyoma),DOID:255 (hemangioma),DOID:2615 (papilloma) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10559-108A1
- 10569-108B2 (leiomyoma cell line:10964C)
- 10570-108B3 (leiomyoma cell line:15242A)
- 10571-108B4 (leiomyoma cell line:15425)
- 10572-108B5
- 10724-110A4
- 10738-110B9
- 10751-110D4
Mouse (Mus musculus)
- 10559-108A1
- 10569-108B2 (leiomyoma cell line:10964C)
- 10570-108B3 (leiomyoma cell line:15242A)
- 10571-108B4 (leiomyoma cell line:15425)
- 10572-108B5
- 10724-110A4
- 10738-110B9
- 10751-110D4
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:0060084 (cell type benign neoplasm), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
5.41e-147 | FFCP PHASE2:Hg19::chr3:132975986..132975997,-#_b27cdd33379734f7d2ccae287b408ef5 | p1@uc003epl.2 |
5.41e-147 | FFCP PHASE1:Hg19::chr3:132975986..132975997,-#_b27cdd33379734f7d2ccae287b408ef5 | p1@uc003epl.2 |
8.98e-131 | FFCP PHASE2:Hg19::chr1:152842532..152842539,+#_f7b4a2a363b6b6d43cd143c9de545242 | p@chr1:152842532..152842539, + |
8.98e-131 | FFCP PHASE2:Hg19::chr1:152842546..152842554,+#_f7b4a2a363b6b6d43cd143c9de545242 | p@chr1:152842546..152842554, + |
8.98e-131 | FFCP PHASE1:Hg19::chr1:152842532..152842539,+#_f7b4a2a363b6b6d43cd143c9de545242 | p@chr1:152842532..152842539, + |
8.98e-131 | FFCP PHASE1:Hg19::chr1:152842546..152842554,+#_f7b4a2a363b6b6d43cd143c9de545242 | p@chr1:152842546..152842554, + |
2.33e-118 | FFCP PHASE1:Hg19::chr3:132976005..132976010,-#_f555932bf39d69a839a6ba1418d480a0 | p2@ENST00000505721 |
2.33e-118 | FFCP PHASE2:Hg19::chr3:132976005..132976010,-#_f555932bf39d69a839a6ba1418d480a0 | p2@ENST00000505721 |
3.48e-118 | FFCP PHASE1:Hg19::chr2:218192886..218192899,-#_70762f448ad82860d79672710b2da202 | p@chr2:218192886..218192899, - |
3.48e-118 | FFCP PHASE2:Hg19::chr2:218192886..218192899,-#_70762f448ad82860d79672710b2da202 | p@chr2:218192886..218192899, - |
5.41e-85 | FFCP PHASE2:Hg19::chr8:42037558..42037573,-#_2cf9f6f28a1a218ef35b3083f7255899 | -, p@chr8:42037558..42037573 |
5.41e-85 | FFCP PHASE1:Hg19::chr8:42037558..42037573,-#_2cf9f6f28a1a218ef35b3083f7255899 | p@chr8:42037558..42037573, - |
1.28e-84 | FFCP PHASE2:Hg19::chr3:141150971..141150978,+#_8cc5c6c300605e25ce1abcb7e4dda252 | p60@ZBTB38 |
1.28e-84 | FFCP PHASE1:Hg19::chr3:141150971..141150978,+#_8cc5c6c300605e25ce1abcb7e4dda252 | p60@ZBTB38 |
2.39e-66 | FFCP PHASE1:Hg19::chr2:218192853..218192858,-#_2a39caa533d592507ab8897ee55a4304 | p@chr2:218192853..218192858, - |
2.39e-66 | FFCP PHASE2:Hg19::chr2:218192853..218192858,-#_2a39caa533d592507ab8897ee55a4304 | p@chr2:218192853..218192858, - |
4.68e-66 | FFCP PHASE1:Hg19::chr1:163045452..163045464,+#_dd02dece8a5c34fd1cbd8004eaae70f9 | p@chr1:163045452..163045464, + |
4.68e-66 | FFCP PHASE2:Hg19::chr1:163045452..163045464,+#_dd02dece8a5c34fd1cbd8004eaae70f9 | +, p@chr1:163045452..163045464 |
2.43e-60 | FFCP PHASE1:Hg19::chr22:44708774..44708788,-#_8d922b1a01f7244629a34014afeb6a22 | p3@KIAA1644 |
2.43e-60 | FFCP PHASE2:Hg19::chr22:44708774..44708788,-#_8d922b1a01f7244629a34014afeb6a22 | p3@KIAA1644 |
4.17e-55 | FFCP PHASE2:Hg19::chr2:207406777..207406786,+#_304bcde8aaeeca946ba68e59bd560f91 | p9@ADAM23 |
4.17e-55 | FFCP PHASE1:Hg19::chr2:207406777..207406786,+#_304bcde8aaeeca946ba68e59bd560f91 | p9@ADAM23 |
1.41e-46 | FFCP PHASE1:Hg19::chr8:42040287..42040298,-#_5f11ec06c50a04660e4d7a653eb7a7eb | p10@PLAT |
1.41e-46 | FFCP PHASE2:Hg19::chr8:42040287..42040298,-#_5f11ec06c50a04660e4d7a653eb7a7eb | p10@PLAT |
9.77e-45 | FFCP PHASE2:Hg19::chr2:218193183..218193196,-#_43e823fd186ab0135b8e96cf5acfba15 | p@chr2:218193183..218193196, - |
9.77e-45 | FFCP PHASE2:Hg19::chr7:12134329..12134354,-#_43e823fd186ab0135b8e96cf5acfba15 | p@chr7:12134329..12134354, - |
9.77e-45 | FFCP PHASE1:Hg19::chr2:218193183..218193196,-#_43e823fd186ab0135b8e96cf5acfba15 | p@chr2:218193183..218193196, - |
9.77e-45 | FFCP PHASE1:Hg19::chr7:12134329..12134354,-#_43e823fd186ab0135b8e96cf5acfba15 | p@chr7:12134329..12134354, - |
6.94e-44 | FFCP PHASE2:Hg19::chr6:86200265..86200276,+#_adcd956d86c47f10f238d8331566d297 | p@chr6:86200265..86200276, + |
6.94e-44 | FFCP PHASE1:Hg19::chr6:86200265..86200276,+#_adcd956d86c47f10f238d8331566d297 | p@chr6:86200265..86200276, + |
1.23e-38 | FFCP PHASE1:Hg19::chrX:7077952..7077959,+#_44a2c872580c742db9ba058f00b8fe69 | p18@STS |
1.23e-38 | FFCP PHASE2:Hg19::chrX:7077952..7077959,+#_44a2c872580c742db9ba058f00b8fe69 | p18@STS |
1.85e-36 | FFCP PHASE1:Hg19::chr6:86204236..86204247,+#_13cf4724976c6dc35fae1ea3199cf9e4 | p@chr6:86204236..86204247, + |
1.85e-36 | FFCP PHASE2:Hg19::chr6:86204236..86204247,+#_13cf4724976c6dc35fae1ea3199cf9e4 | p@chr6:86204236..86204247, + |
2.98e-36 | FFCP PHASE1:Hg19::chr1:198203826..198203841,+#_ec5f480cbc6ecc7c326b28ddf4090a35 | p@chr1:198203826..198203841, + |
2.98e-36 | FFCP PHASE2:Hg19::chr1:198203826..198203841,+#_ec5f480cbc6ecc7c326b28ddf4090a35 | p@chr1:198203826..198203841, + |
4.66e-34 | FFCP PHASE1:Hg19::chr13:32313685..32313699,+#_9297d4b0db4fc980e806c113e3748d82 | p2@RXFP2 |
4.66e-34 | FFCP PHASE2:Hg19::chr13:32313685..32313699,+#_9297d4b0db4fc980e806c113e3748d82 | p2@RXFP2 |
5.96e-34 | FFCP PHASE2:Hg19::chr6:130763941..130763951,+#_704ceecee2f611217932d8f960451806 | p@chr6:130763941..130763951, + |
5.96e-34 | FFCP PHASE1:Hg19::chr1:46379338..46379343,+#_704ceecee2f611217932d8f960451806 | p13@MAST2 |
5.96e-34 | FFCP PHASE1:Hg19::chr7:12134356..12134370,-#_704ceecee2f611217932d8f960451806 | -, p@chr7:12134356..12134370 |
5.96e-34 | FFCP PHASE2:Hg19::chr4:187518318..187518321,-#_704ceecee2f611217932d8f960451806 | p53@FAT1 |
5.96e-34 | FFCP PHASE2:Hg19::chr1:46379338..46379343,+#_704ceecee2f611217932d8f960451806 | p13@MAST2 |
5.96e-34 | FFCP PHASE1:Hg19::chr3:132975822..132975848,-#_704ceecee2f611217932d8f960451806 | p@chr3:132975822..132975848, - |
5.96e-34 | FFCP PHASE1:Hg19::chr6:130763941..130763951,+#_704ceecee2f611217932d8f960451806 | p@chr6:130763941..130763951, + |
5.96e-34 | FFCP PHASE2:Hg19::chr11:102712977..102712984,-#_704ceecee2f611217932d8f960451806 | p@chr11:102712977..102712984, - |
5.96e-34 | FFCP PHASE2:Hg19::chr3:132975822..132975848,-#_704ceecee2f611217932d8f960451806 | p@chr3:132975822..132975848, - |
5.96e-34 | FFCP PHASE1:Hg19::chr3:132975886..132975894,-#_704ceecee2f611217932d8f960451806 | p1@ENST00000504993 |
5.96e-34 | FFCP PHASE1:Hg19::chr11:102712977..102712984,-#_704ceecee2f611217932d8f960451806 | p@chr11:102712977..102712984, - |
5.96e-34 | FFCP PHASE2:Hg19::chr3:132975886..132975894,-#_704ceecee2f611217932d8f960451806 | p1@ENST00000504993 |
5.96e-34 | FFCP PHASE2:Hg19::chr7:12134356..12134370,-#_704ceecee2f611217932d8f960451806 | p@chr7:12134356..12134370, - |
5.96e-34 | FFCP PHASE1:Hg19::chr4:187518318..187518321,-#_704ceecee2f611217932d8f960451806 | p53@FAT1 |
9.1e-34 | FFCP PHASE2:Hg19::chr13:32313658..32313668,+#_b77e877bc22477102e0f5ad74ae8c86d | p3@RXFP2 |
9.1e-34 | FFCP PHASE1:Hg19::chr13:32313658..32313668,+#_b77e877bc22477102e0f5ad74ae8c86d | p3@RXFP2 |
8.26e-33 | FFCP PHASE2:Hg19::chr21:30000326..30000330,+#_35e26630c95d93cb21305eb3c7fffc37 | p@chr21:30000326..30000330, + |
8.26e-33 | FFCP PHASE1:Hg19::chr21:30000326..30000330,+#_35e26630c95d93cb21305eb3c7fffc37 | p@chr21:30000326..30000330, + |
2.41e-32 | FFCP PHASE1:Hg19::chr6:130761678..130761702,+#_e9696078c6239f2c955b23d981c5c587 | p1@AB385516 |
2.41e-32 | FFCP PHASE2:Hg19::chr6:130761678..130761702,+#_e9696078c6239f2c955b23d981c5c587 | p1@AB385516 |
1.3e-31 | FFCP PHASE2:Hg19::chr8:42042654..42042665,-#_0a722e4b7a39d8cd7d49ce335e2d0cf6 | p9@PLAT |
1.3e-31 | FFCP PHASE1:Hg19::chr8:42042654..42042665,-#_0a722e4b7a39d8cd7d49ce335e2d0cf6 | p9@PLAT |
7.37e-31 | FFCP PHASE1:Hg19::chr2:220326139..220326158,+#_7f9cf95065d860d668707d0f6ce9edfb | p10@SPEG |
7.37e-31 | FFCP PHASE2:Hg19::chr2:220326139..220326158,+#_7f9cf95065d860d668707d0f6ce9edfb | p10@SPEG |
1.0e-30 | FFCP PHASE1:Hg19::chr7:27219651..27219660,-#_62693abf5dce9550272f68dbaf71ec18 | p4@ENST00000470747 |
1.0e-30 | FFCP PHASE2:Hg19::chr7:27219651..27219660,-#_62693abf5dce9550272f68dbaf71ec18 | p4@ENST00000470747 |
1.71e-30 | FFCP PHASE1:Hg19::chr8:42033253..42033264,-#_506e064d14768ad0da260a0cd28b39cd | p@chr8:42033253..42033264, - |
1.71e-30 | FFCP PHASE2:Hg19::chr8:42033253..42033264,-#_506e064d14768ad0da260a0cd28b39cd | p@chr8:42033253..42033264, - |
1.98e-30 | FFCP PHASE2:Hg19::chr3:141151044..141151053,+#_abe0afcef8d2961bc07f1aa50b43b2e0 | p51@ZBTB38 |
1.98e-30 | FFCP PHASE1:Hg19::chr3:141151044..141151053,+#_abe0afcef8d2961bc07f1aa50b43b2e0 | p51@ZBTB38 |
3.59e-30 | FFCP PHASE2:Hg19::chr10:90974443..90974454,-#_a80b2c2fe861ae77cb9f331eaa0794a2 | p@chr10:90974443..90974454, - |
3.59e-30 | FFCP PHASE1:Hg19::chr10:90974443..90974454,-#_a80b2c2fe861ae77cb9f331eaa0794a2 | p@chr10:90974443..90974454, - |
8.26e-30 | FFCP PHASE2:Hg19::chr7:84349931..84349955,-#_96c1b91dc0e192fb38bc73f756e2d8b7 | p@chr7:84349931..84349955, - |
8.26e-30 | FFCP PHASE1:Hg19::chr7:84349931..84349955,-#_96c1b91dc0e192fb38bc73f756e2d8b7 | p@chr7:84349931..84349955, - |
1.8e-29 | FFCP PHASE1:Hg19::chr9:106854088..106854104,-#_4816a7e38eabc8866e2f55d401878828 | p@chr9:106854088..106854104, - |
1.8e-29 | FFCP PHASE2:Hg19::chr9:106854088..106854104,-#_4816a7e38eabc8866e2f55d401878828 | p@chr9:106854088..106854104, - |
6.14e-29 | FFCP PHASE2:Hg19::chr3:98518094..98518105,-#_17967820b1fafeac29977b2c4d505ca4 | p39@DCBLD2 |
6.14e-29 | FFCP PHASE1:Hg19::chr3:98518094..98518105,-#_17967820b1fafeac29977b2c4d505ca4 | p39@DCBLD2 |
6.28e-29 | FFCP PHASE2:Hg19::chr10:90988088..90988122,-#_52e21bace1aa5bb4d2683236be2cd436 | p@chr10:90988088..90988122, - |
6.28e-29 | FFCP PHASE1:Hg19::chr10:90988088..90988122,-#_52e21bace1aa5bb4d2683236be2cd436 | p@chr10:90988088..90988122, - |
6.84e-28 | FFCP PHASE1:Hg19::chr1:219615990..219616001,-#_af5cd7e39f8c6aa2f803f19518dc88dd | p1@ENST00000420762 |
6.84e-28 | FFCP PHASE2:Hg19::chr1:219615990..219616001,-#_af5cd7e39f8c6aa2f803f19518dc88dd | p1@ENST00000420762 |
8.12e-28 | FFCP PHASE2:Hg19::chr4:6279204..6279216,+#_7f84fc9be9b5cdad16a858043d47d0ed | p6@WFS1 |
8.12e-28 | FFCP PHASE1:Hg19::chr4:6279204..6279216,+#_7f84fc9be9b5cdad16a858043d47d0ed | p6@WFS1 |
9.35e-28 | FFCP PHASE1:Hg19::chr8:42045498..42045512,-#_da9240f2c0f9be7bdb7f8b426d268aa2 | p6@PLAT |
9.35e-28 | FFCP PHASE2:Hg19::chr8:42045498..42045512,-#_da9240f2c0f9be7bdb7f8b426d268aa2 | p6@PLAT |
1.06e-27 | FFCP PHASE1:Hg19::chr3:151871166..151871172,+#_6d3c5473e2007b2cf185f005ce313d04 | p@chr3:151871166..151871172, + |
1.06e-27 | FFCP PHASE1:Hg19::chr6:17281802..17281817,+#_6d3c5473e2007b2cf185f005ce313d04 | p13@RBM24 |
1.06e-27 | FFCP PHASE2:Hg19::chr6:17281802..17281817,+#_6d3c5473e2007b2cf185f005ce313d04 | p13@RBM24 |
1.06e-27 | FFCP PHASE2:Hg19::chr3:151871166..151871172,+#_6d3c5473e2007b2cf185f005ce313d04 | p@chr3:151871166..151871172, + |
1.82e-27 | FFCP PHASE1:Hg19::chr3:69811826..69811835,+#_13c56b853b6bca00f80033add096f7d4 | p16@MITF |
1.82e-27 | FFCP PHASE2:Hg19::chr3:69811826..69811835,+#_13c56b853b6bca00f80033add096f7d4 | p16@MITF |
2.72e-27 | FFCP PHASE1:Hg19::chr7:129962463..129962477,+#_7258a700d3d7d81673c1831c50798954 | +, p@chr7:129962463..129962477 |
2.72e-27 | FFCP PHASE2:Hg19::chr7:129962463..129962477,+#_7258a700d3d7d81673c1831c50798954 | p@chr7:129962463..129962477, + |
2.98e-27 | FFCP PHASE1:Hg19::chr1:163042618..163042628,+#_dbddb6737272f2a99fa74828a5a4c682 | p@chr1:163042618..163042628, + |
2.98e-27 | FFCP PHASE2:Hg19::chr1:163042618..163042628,+#_dbddb6737272f2a99fa74828a5a4c682 | p@chr1:163042618..163042628, + |
3.26e-27 | FFCP PHASE2:Hg19::chr12:75875762..75875778,+#_d98a9755c6da6358a94bf48c83b9ecf4 | p@chr12:75875762..75875778, + |
3.26e-27 | FFCP PHASE1:Hg19::chr12:75875762..75875778,+#_d98a9755c6da6358a94bf48c83b9ecf4 | p@chr12:75875762..75875778, + |
4.65e-27 | FFCP PHASE2:Hg19::chr14:76447469..76447487,-#_c7ff828390d0b37751b093746033ecf3 | p12@TGFB3 |
4.65e-27 | FFCP PHASE1:Hg19::chr14:76447469..76447487,-#_c7ff828390d0b37751b093746033ecf3 | p12@TGFB3 |
5.31e-27 | FFCP PHASE2:Hg19::chr10:90975757..90975768,-#_af6984e2a61990d78262374d98a2964c | p@chr10:90975757..90975768, - |
5.31e-27 | FFCP PHASE1:Hg19::chr10:90975757..90975768,-#_af6984e2a61990d78262374d98a2964c | p@chr10:90975757..90975768, - |