DOID:1115
From FANTOM5_SSTAR
Name: | sarcoma | |
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Namespace: | FANTOM | |
Definition: | "A cell type cancer that has_material_basis_in abnormally proliferating cells derived_from embryonic mesoderm." [url:http://en.wikipedia.org/wiki/Sarcoma] | |
Xrefs: |
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Synonyms: |
"connective and soft tissue neoplasm" EXACT [] "tumor of soft tissue and skeleton" EXACT [NCI2004_11_17:C3810] | |
Alt_id: | DOID:3936 |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | DOID:0050687(cell type cancer) |
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Children
is a: | DOID:4235 (spindle cell sarcoma) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)
- 10441-106E9 (synovial sarcoma cell line:HS-SY-II)
- 10448-106F7 (endometrial stromal sarcoma cell line:OMC-9)
- 10477-106I9 (rhabdomyosarcoma cell line:RMS-YM)
- 10600-108E6 (myxofibrosarcoma cell line:MFH-ino)
- 10626-108H5
- 10642-109A3 (carcinosarcoma cell line:JHUCS-1)
- 10684-109E9 (myxofibrosarcoma cell line:NMFH-1)
- 10700-109G7 (chondrosarcoma cell line:SW 1353)
- 10703-109H1 (carcinoid cell line:NCI-H1770)
... further results Mouse (Mus musculus)
- 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)
- 10441-106E9 (synovial sarcoma cell line:HS-SY-II)
- 10448-106F7 (endometrial stromal sarcoma cell line:OMC-9)
- 10477-106I9 (rhabdomyosarcoma cell line:RMS-YM)
- 10600-108E6 (myxofibrosarcoma cell line:MFH-ino)
- 10626-108H5
- 10642-109A3 (carcinosarcoma cell line:JHUCS-1)
- 10684-109E9 (myxofibrosarcoma cell line:NMFH-1)
- 10700-109G7 (chondrosarcoma cell line:SW 1353)
- 10703-109H1 (carcinoid cell line:NCI-H1770)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:1115 (sarcoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data