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DOID:1612

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Name:breast cancer
Namespace:FANTOM
Definition:"A thoracic cancer that originates in the mammary gland." [url:http://en.wikipedia.org/wiki/Mammary_tumor]
Xrefs:
links:

MSH:D001943
NCI:C9335
OMIM:114480
SNOMEDCT_2010_1_31:126926005
SNOMEDCT_2010_1_31:154521006
SNOMEDCT_2010_1_31:190121004
SNOMEDCT_2010_1_31:254837009
SNOMEDCT_2010_1_31:269595005
UMLS_CUI:C0006142
UMLS_CUI:C0153555

UMLS_CUI:C1458155
Synonyms: "breast cancer" EXACT []
"breast tumor" EXACT [NCI2004_11_17:C2910]
"Ca breast - NOS" EXACT [SNOMEDCT_2005_07_31:154521006]
"malignant neoplasm of breast" EXACT []
"malignant tumor of the breast" EXACT [NCI2004_11_17:C9335]
"mammary cancer" EXACT []
"mammary neoplasm" RELATED []
"mammary tumor" EXACT [CSP2005:2016-0671]
"primary breast cancer" EXACT []
Comments:OMIM mapping confirmed by DO. [SN].
Alt_id: DOID:1648
DOID:4241

Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.

link to ontology dataset
data

Parents

is_a:DOID:5093(thoracic cancer)



Children
NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:1612 (breast cancer), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data

P-valueFFCPShort description
2.57e-195FFCP PHASE1:Hg19::chr17:74574500..74574512,-#_cd40e37b26d776d5316b4b5611705f34p@chr17:74574500..74574512, -
2.57e-195FFCP PHASE2:Hg19::chr17:74574500..74574512,-#_cd40e37b26d776d5316b4b5611705f34p@chr17:74574500..74574512, -
6.94e-147FFCP PHASE2:Hg19::chr10:19498407..19498415,+#_9c302d1f970ff812f582d0066b7c66f1p@chr10:19498407..19498415, +
6.94e-147FFCP PHASE1:Hg19::chr10:9012087..9012100,+#_9c302d1f970ff812f582d0066b7c66f1p1@ENST00000456526
6.94e-147FFCP PHASE2:Hg19::chr21:41755024..41755027,+#_9c302d1f970ff812f582d0066b7c66f1p2@DSCAM-AS1
6.94e-147FFCP PHASE1:Hg19::chr10:19498568..19498573,+#_9c302d1f970ff812f582d0066b7c66f1p@chr10:19498568..19498573, +
6.94e-147FFCP PHASE2:Hg19::chr10:9012128..9012139,+#_9c302d1f970ff812f582d0066b7c66f1p2@ENST00000456526
6.94e-147FFCP PHASE1:Hg19::chr21:41711178..41711186,-#_9c302d1f970ff812f582d0066b7c66f1p@chr21:41711178..41711186, -
6.94e-147FFCP PHASE1:Hg19::chr10:19498407..19498415,+#_9c302d1f970ff812f582d0066b7c66f1p@chr10:19498407..19498415, +
6.94e-147FFCP PHASE2:Hg19::chr10:8904309..8904317,+#_9c302d1f970ff812f582d0066b7c66f1p@chr10:8904309..8904317, +
6.94e-147FFCP PHASE2:Hg19::chr21:41755185..41755210,+#_9c302d1f970ff812f582d0066b7c66f1p1@DSCAM-AS1
6.94e-147FFCP PHASE1:Hg19::chr11:85539944..85539950,+#_9c302d1f970ff812f582d0066b7c66f1p@chr11:85539944..85539950, +
6.94e-147FFCP PHASE2:Hg19::chr10:19498507..19498511,+#_9c302d1f970ff812f582d0066b7c66f1p@chr10:19498507..19498511, +
6.94e-147FFCP PHASE1:Hg19::chr10:9012128..9012139,+#_9c302d1f970ff812f582d0066b7c66f1p2@ENST00000456526
6.94e-147FFCP PHASE1:Hg19::chr9:83986187..83986191,-#_9c302d1f970ff812f582d0066b7c66f1p@chr9:83986187..83986191, -
6.94e-147FFCP PHASE2:Hg19::chr17:38843592..38843605,+#_9c302d1f970ff812f582d0066b7c66f1p@chr17:38843592..38843605, +
6.94e-147FFCP PHASE1:Hg19::chr21:41755024..41755027,+#_9c302d1f970ff812f582d0066b7c66f1p2@DSCAM-AS1
6.94e-147FFCP PHASE2:Hg19::chr10:8910201..8910211,+#_9c302d1f970ff812f582d0066b7c66f1p@chr10:8910201..8910211, +
6.94e-147FFCP PHASE2:Hg19::chr21:41756567..41756583,-#_9c302d1f970ff812f582d0066b7c66f1p@chr21:41756567..41756583, -
6.94e-147FFCP PHASE1:Hg19::chr10:8904309..8904317,+#_9c302d1f970ff812f582d0066b7c66f1p@chr10:8904309..8904317, +
6.94e-147FFCP PHASE1:Hg19::chr17:38843592..38843605,+#_9c302d1f970ff812f582d0066b7c66f1p@chr17:38843592..38843605, +
6.94e-147FFCP PHASE1:Hg19::chr12:3324464..3324485,+#_9c302d1f970ff812f582d0066b7c66f1p4@TSPAN9
6.94e-147FFCP PHASE2:Hg19::chr10:19498541..19498551,+#_9c302d1f970ff812f582d0066b7c66f1p@chr10:19498541..19498551, +
6.94e-147FFCP PHASE2:Hg19::chr9:83986187..83986191,-#_9c302d1f970ff812f582d0066b7c66f1p@chr9:83986187..83986191, -
6.94e-147FFCP PHASE2:Hg19::chr11:85539944..85539950,+#_9c302d1f970ff812f582d0066b7c66f1p@chr11:85539944..85539950, +
6.94e-147FFCP PHASE1:Hg19::chr21:41755185..41755210,+#_9c302d1f970ff812f582d0066b7c66f1p1@DSCAM-AS1
6.94e-147FFCP PHASE1:Hg19::chr10:19498507..19498511,+#_9c302d1f970ff812f582d0066b7c66f1p@chr10:19498507..19498511, +
6.94e-147FFCP PHASE2:Hg19::chr10:9012087..9012100,+#_9c302d1f970ff812f582d0066b7c66f1p1@ENST00000456526
6.94e-147FFCP PHASE1:Hg19::chr10:8910201..8910211,+#_9c302d1f970ff812f582d0066b7c66f1p@chr10:8910201..8910211, +
6.94e-147FFCP PHASE2:Hg19::chr12:3324464..3324485,+#_9c302d1f970ff812f582d0066b7c66f1p4@TSPAN9
6.94e-147FFCP PHASE2:Hg19::chr21:41711178..41711186,-#_9c302d1f970ff812f582d0066b7c66f1p@chr21:41711178..41711186, -
6.94e-147FFCP PHASE2:Hg19::chr10:19498568..19498573,+#_9c302d1f970ff812f582d0066b7c66f1p@chr10:19498568..19498573, +
6.94e-147FFCP PHASE1:Hg19::chr21:41756567..41756583,-#_9c302d1f970ff812f582d0066b7c66f1p@chr21:41756567..41756583, -
6.94e-147FFCP PHASE1:Hg19::chr10:19498541..19498551,+#_9c302d1f970ff812f582d0066b7c66f1p@chr10:19498541..19498551, +
2.79e-131FFCP PHASE2:Hg19::chr3:129226514..129226531,+#_8f74a50e0b15aa746be0b43e8b558ec3p@chr3:129226514..129226531, +
2.79e-131FFCP PHASE1:Hg19::chr3:129226514..129226531,+#_8f74a50e0b15aa746be0b43e8b558ec3p@chr3:129226514..129226531, +
8.91e-111FFCP PHASE1:Hg19::chr17:59469536..59469541,+#_081e426245ad66293813d6fcf8b456b6p@chr17:59469536..59469541, +
8.91e-111FFCP PHASE2:Hg19::chr13:23733194..23733206,+#_081e426245ad66293813d6fcf8b456b6+, p@chr13:23733194..23733206
8.91e-111FFCP PHASE1:Hg19::chr13:23733194..23733206,+#_081e426245ad66293813d6fcf8b456b6p@chr13:23733194..23733206, +
8.91e-111FFCP PHASE2:Hg19::chr20:52482691..52482707,-#_081e426245ad66293813d6fcf8b456b6p@chr20:52482691..52482707, -
8.91e-111FFCP PHASE1:Hg19::chr20:52482691..52482707,-#_081e426245ad66293813d6fcf8b456b6p@chr20:52482691..52482707, -
8.91e-111FFCP PHASE2:Hg19::chr17:59469536..59469541,+#_081e426245ad66293813d6fcf8b456b6p@chr17:59469536..59469541, +
1.3e-110FFCP PHASE1:Hg19::chr5:177505250..177505293,-#_56120d4b932f8e7b4be4d9d7188ab9ddp@chr5:177505250..177505293, -
1.3e-110FFCP PHASE2:Hg19::chr5:177505250..177505293,-#_56120d4b932f8e7b4be4d9d7188ab9ddp@chr5:177505250..177505293, -
3.03e-99FFCP PHASE1:Hg19::chr3:129226494..129226510,+#_5314e536b386a02d04ff2081b73a5cd3p@chr3:129226494..129226510, +
3.03e-99FFCP PHASE2:Hg19::chr3:129226494..129226510,+#_5314e536b386a02d04ff2081b73a5cd3p@chr3:129226494..129226510, +
5.02e-99FFCP PHASE1:Hg19::chr14:38064198..38064200,-#_5c25ae24124209456fe9e98c0e759b58p11@FOXA1
5.02e-99FFCP PHASE2:Hg19::chr14:38064198..38064200,-#_5c25ae24124209456fe9e98c0e759b58p11@FOXA1
1.55e-98FFCP PHASE2:Hg19::chr19:15674459..15674486,+#_fc0367bad6983f07fd20523cac89cccep@chr19:15674459..15674486, +
1.55e-98FFCP PHASE1:Hg19::chr19:15674459..15674486,+#_fc0367bad6983f07fd20523cac89cccep@chr19:15674459..15674486, +
1.55e-98FFCP PHASE2:Hg19::chr13:23583578..23583586,+#_fc0367bad6983f07fd20523cac89cccep@chr13:23583578..23583586, +
1.55e-98FFCP PHASE1:Hg19::chr13:23583578..23583586,+#_fc0367bad6983f07fd20523cac89ccce+, p@chr13:23583578..23583586
1.55e-98FFCP PHASE2:Hg19::chr10:19498455..19498482,+#_fc0367bad6983f07fd20523cac89cccep@chr10:19498455..19498482, +
1.55e-98FFCP PHASE1:Hg19::chr10:9012105..9012111,+#_fc0367bad6983f07fd20523cac89cccep3@ENST00000456526
1.55e-98FFCP PHASE2:Hg19::chr17:65990543..65990553,-#_fc0367bad6983f07fd20523cac89cccep@chr17:65990543..65990553, -
1.55e-98FFCP PHASE1:Hg19::chr10:19498455..19498482,+#_fc0367bad6983f07fd20523cac89cccep@chr10:19498455..19498482, +
1.55e-98FFCP PHASE2:Hg19::chr1:96504230..96504238,-#_fc0367bad6983f07fd20523cac89cccep@chr1:96504230..96504238, -
1.55e-98FFCP PHASE1:Hg19::chr17:65990543..65990553,-#_fc0367bad6983f07fd20523cac89cccep@chr17:65990543..65990553, -
1.55e-98FFCP PHASE1:Hg19::chr1:96504230..96504238,-#_fc0367bad6983f07fd20523cac89cccep@chr1:96504230..96504238, -
1.55e-98FFCP PHASE2:Hg19::chr10:9012105..9012111,+#_fc0367bad6983f07fd20523cac89cccep3@ENST00000456526
4.23e-89FFCP PHASE2:Hg19::chr8:91871545..91871568,-#_724532ea0aa183464a6c808a1bde8ffep3@ENST00000517884
4.23e-89FFCP PHASE1:Hg19::chr8:91871545..91871568,-#_724532ea0aa183464a6c808a1bde8ffep3@ENST00000517884
7.73e-89FFCP PHASE1:Hg19::chr3:161089631..161089635,+#_54699095806a701fcc65b3e4492c7093p@chr3:161089631..161089635, +
7.73e-89FFCP PHASE2:Hg19::chr3:161089631..161089635,+#_54699095806a701fcc65b3e4492c7093p@chr3:161089631..161089635, +
1.46e-88FFCP PHASE2:Hg19::chr10:8091813..8091823,+#_29e6171f51d64455c1482369962760abp@chr10:8091813..8091823, +
1.46e-88FFCP PHASE1:Hg19::chr10:8091813..8091823,+#_29e6171f51d64455c1482369962760abp@chr10:8091813..8091823, +
2.57e-88FFCP PHASE1:Hg19::chr15:88119982..88120003,+#_c1d834415c10b14bad0afc01936e4875p2@LINC00052
2.57e-88FFCP PHASE2:Hg19::chr15:88119982..88120003,+#_c1d834415c10b14bad0afc01936e4875p2@LINC00052
5.61e-88FFCP PHASE2:Hg19::chr1:6488281..6488301,+#_3646c7d0bfde4495dd85e528ef2a3620p@chr1:6488281..6488301, +
5.61e-88FFCP PHASE1:Hg19::chr1:6488281..6488301,+#_3646c7d0bfde4495dd85e528ef2a3620p@chr1:6488281..6488301, +
1.74e-79FFCP PHASE2:Hg19::chr8:95653861..95653872,+#_4971d40914e3e9e456411792880a445ep10@ESRP1
1.74e-79FFCP PHASE1:Hg19::chr8:95653861..95653872,+#_4971d40914e3e9e456411792880a445ep10@ESRP1
1.21e-74FFCP PHASE2:Hg19::chr12:53359307..53359335,+#_5face28992c33e2a9359ca57053545e2+, p@chr12:53359307..53359335
1.21e-74FFCP PHASE2:Hg19::chr16:78085184..78085211,+#_5face28992c33e2a9359ca57053545e2p@chr16:78085184..78085211, +
1.21e-74FFCP PHASE1:Hg19::chr16:78085184..78085211,+#_5face28992c33e2a9359ca57053545e2p@chr16:78085184..78085211, +
1.21e-74FFCP PHASE1:Hg19::chr12:53359307..53359335,+#_5face28992c33e2a9359ca57053545e2p@chr12:53359307..53359335, +
1.56e-74FFCP PHASE2:Hg19::chr1:150953891..150953894,+#_f3b027d2934f65bc59d9ff1aa0ac4556p@chr1:150953891..150953894, +
1.56e-74FFCP PHASE1:Hg19::chr1:150953891..150953894,+#_f3b027d2934f65bc59d9ff1aa0ac4556p@chr1:150953891..150953894, +
2.58e-74FFCP PHASE1:Hg19::chr11:61280885..61280904,-#_8027e7efe7418a985e4a89e86c9f16dap@chr11:61280885..61280904, -
2.58e-74FFCP PHASE1:Hg19::chr9:137258939..137258945,+#_8027e7efe7418a985e4a89e86c9f16dap@chr9:137258939..137258945, +
2.58e-74FFCP PHASE2:Hg19::chr14:100485738..100485745,+#_8027e7efe7418a985e4a89e86c9f16dap37@EVL
2.58e-74FFCP PHASE1:Hg19::chr14:100485738..100485745,+#_8027e7efe7418a985e4a89e86c9f16dap37@EVL
2.58e-74FFCP PHASE2:Hg19::chr9:137258939..137258945,+#_8027e7efe7418a985e4a89e86c9f16dap@chr9:137258939..137258945, +
2.58e-74FFCP PHASE2:Hg19::chr11:61280885..61280904,-#_8027e7efe7418a985e4a89e86c9f16dap@chr11:61280885..61280904, -
7.4e-73FFCP PHASE1:Hg19::chr14:38065203..38065215,-#_3147bae7411447d51eecc459e1e37ec7p9@FOXA1
7.4e-73FFCP PHASE2:Hg19::chr14:38065203..38065215,-#_3147bae7411447d51eecc459e1e37ec7p9@FOXA1
3.22e-72FFCP PHASE2:Hg19::chr20:49241036..49241049,-#_f562899dd77c4f32c98f52fc5aae63bbp@chr20:49241036..49241049, -
3.22e-72FFCP PHASE1:Hg19::chr20:49241036..49241049,-#_f562899dd77c4f32c98f52fc5aae63bbp@chr20:49241036..49241049, -
4.11e-67FFCP PHASE2:Hg19::chr14:105267423..105267443,+#_f7b184a079a643cf64cda84583c2f232p2@ZBTB42
4.11e-67FFCP PHASE1:Hg19::chr14:105267423..105267443,+#_f7b184a079a643cf64cda84583c2f232p2@ZBTB42
9.57e-67FFCP PHASE2:Hg19::chr10:8096323..8096329,-#_2a1a5471b3185138ba2f426844889fb0p@chr10:8096323..8096329, -
9.57e-67FFCP PHASE1:Hg19::chr10:8096323..8096329,-#_2a1a5471b3185138ba2f426844889fb0p@chr10:8096323..8096329, -
2.4e-66FFCP PHASE2:Hg19::chr10:109305043..109305046,+#_587d67067fe7a591b1a596169e64179dp@chr10:109305043..109305046, +
2.4e-66FFCP PHASE2:Hg19::chr9:140506839..140506847,+#_587d67067fe7a591b1a596169e64179dp9@ARRDC1
2.4e-66FFCP PHASE2:Hg19::chr10:9238697..9238718,-#_587d67067fe7a591b1a596169e64179dp@chr10:9238697..9238718, -
2.4e-66FFCP PHASE1:Hg19::chr10:109305043..109305046,+#_587d67067fe7a591b1a596169e64179dp@chr10:109305043..109305046, +
2.4e-66FFCP PHASE1:Hg19::chr10:118030368..118030379,+#_587d67067fe7a591b1a596169e64179dp@chr10:118030368..118030379, +
2.4e-66FFCP PHASE2:Hg19::chr10:118030368..118030379,+#_587d67067fe7a591b1a596169e64179dp@chr10:118030368..118030379, +
2.4e-66FFCP PHASE1:Hg19::chr10:9238697..9238718,-#_587d67067fe7a591b1a596169e64179dp@chr10:9238697..9238718, -
2.4e-66FFCP PHASE2:Hg19::chr20:49347538..49347547,-#_587d67067fe7a591b1a596169e64179dp@chr20:49347538..49347547, -

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