DOID:3119
From FANTOM5_SSTAR
Name: | gastrointestinal system cancer | ||
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Namespace: | FANTOM | ||
Definition: | "An organ system cancer located_in gastrointestinal tract that is manifested in organs of the gastrointestinal system." [url:http://en.wikipedia.org/wiki/Human_gastrointestinal_tract] | ||
Xrefs: |
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Synonyms: |
"digestive system cancer" EXACT [] "gastrointestinal tract cancer" EXACT [NCI2004_11_17:C4890] "GI tumor" EXACT [NCI2004_11_17:C3052] | ||
Alt_id: |
DOID:4945 DOID:8377 |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | DOID:0050686(organ system cancer) |
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Children
is a: | DOID:0060119 (pharynx cancer),FF:0100797 (colonic cancer cell line),DOID:10155 (intestinal cancer),FF:10417-106C3 (papillotubular adenocarcinoma cell line:TGBC18TKB),DOID:10534 (stomach cancer),FF:10628-108H7 (),DOID:3571 (liver cancer),DOID:8618 (oral cavity cancer) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10417-106C3 (papillotubular adenocarcinoma cell line:TGBC18TKB)
- 10420-106C6 (colon carcinoma cell line:COLO-320)
- 10436-106E4 (signet ring carcinoma cell line:Kato III)
- 10459-106G9
- 10469-106I1 (rectal cancer cell line:TT1TKB)
- 10473-106I5
- 10511-107D7
- 10513-107D9 (colon carcinoma cell line:CACO-2)
- 10516-107E3
- 10520-107E7
... further results Mouse (Mus musculus)
- 10417-106C3 (papillotubular adenocarcinoma cell line:TGBC18TKB)
- 10420-106C6 (colon carcinoma cell line:COLO-320)
- 10436-106E4 (signet ring carcinoma cell line:Kato III)
- 10459-106G9
- 10469-106I1 (rectal cancer cell line:TT1TKB)
- 10473-106I5
- 10511-107D7
- 10513-107D9 (colon carcinoma cell line:CACO-2)
- 10516-107E3
- 10520-107E7
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3119 (gastrointestinal system cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
1.76e-45 | FFCP PHASE2:Hg19::chr7:13545393..13545395,+#_3a801c9486010a9a25fd6e084cea2858 | p@chr7:13545393..13545395, + |
1.76e-45 | FFCP PHASE1:Hg19::chr7:13545393..13545395,+#_3a801c9486010a9a25fd6e084cea2858 | p@chr7:13545393..13545395, + |
1.46e-32 | FFCP PHASE1:Hg19::chr7:12997533..12997536,+#_703ebab38b9e55c2c0791f3c52fba433 | p@chr7:12997533..12997536, + |
1.46e-32 | FFCP PHASE2:Hg19::chr7:12997533..12997536,+#_703ebab38b9e55c2c0791f3c52fba433 | p@chr7:12997533..12997536, + |
2.02e-32 | FFCP PHASE1:Hg19::chr8:139755835..139755842,-#_6f4a0e38a1a70f9c4cef89df0692f9a2 | p@chr8:139755835..139755842, - |
2.02e-32 | FFCP PHASE2:Hg19::chr8:139755835..139755842,-#_6f4a0e38a1a70f9c4cef89df0692f9a2 | p@chr8:139755835..139755842, - |
5.55e-30 | FFCP PHASE2:Hg19::chr1:20813515..20813530,-#_0ae09fd3f37625f40f676543ce0e1306 | p@chr1:20813515..20813530, - |
5.55e-30 | FFCP PHASE1:Hg19::chr1:20813515..20813530,-#_0ae09fd3f37625f40f676543ce0e1306 | p@chr1:20813515..20813530, - |
2.55e-29 | FFCP PHASE2:Hg19::chr2:163942394..163942398,+#_7f4e093949e24eb0389cec8c1eb977ab | p@chr2:163942394..163942398, + |
2.55e-29 | FFCP PHASE1:Hg19::chr17:63771073..63771114,-#_7f4e093949e24eb0389cec8c1eb977ab | p@chr17:63771073..63771114, - |
2.55e-29 | FFCP PHASE1:Hg19::chr7:27282288..27282293,-#_7f4e093949e24eb0389cec8c1eb977ab | p2@ENST00000519050 |
2.55e-29 | FFCP PHASE2:Hg19::chr7:13045950..13045959,+#_7f4e093949e24eb0389cec8c1eb977ab | p@chr7:13045950..13045959, + |
2.55e-29 | FFCP PHASE2:Hg19::chr20:2397889..2397925,+#_7f4e093949e24eb0389cec8c1eb977ab | p@chr20:2397889..2397925, + |
2.55e-29 | FFCP PHASE1:Hg19::chr2:163942394..163942398,+#_7f4e093949e24eb0389cec8c1eb977ab | p@chr2:163942394..163942398, + |
2.55e-29 | FFCP PHASE2:Hg19::chr18:28860939..28860953,-#_7f4e093949e24eb0389cec8c1eb977ab | p@chr18:28860939..28860953, - |
2.55e-29 | FFCP PHASE2:Hg19::chr6:102247584..102247620,+#_7f4e093949e24eb0389cec8c1eb977ab | p@chr6:102247584..102247620, + |
2.55e-29 | FFCP PHASE2:Hg19::chr2:158443804..158443809,-#_7f4e093949e24eb0389cec8c1eb977ab | p@chr2:158443804..158443809, - |
2.55e-29 | FFCP PHASE2:Hg19::chr16:1631093..1631103,-#_7f4e093949e24eb0389cec8c1eb977ab | p@chr16:1631093..1631103, - |
2.55e-29 | FFCP PHASE1:Hg19::chr20:2397889..2397925,+#_7f4e093949e24eb0389cec8c1eb977ab | p@chr20:2397889..2397925, + |
2.55e-29 | FFCP PHASE2:Hg19::chr2:130067633..130067649,-#_7f4e093949e24eb0389cec8c1eb977ab | p@chr2:130067633..130067649, - |
2.55e-29 | FFCP PHASE1:Hg19::chr7:13045950..13045959,+#_7f4e093949e24eb0389cec8c1eb977ab | p@chr7:13045950..13045959, + |
2.55e-29 | FFCP PHASE1:Hg19::chr18:28860939..28860953,-#_7f4e093949e24eb0389cec8c1eb977ab | p@chr18:28860939..28860953, - |
2.55e-29 | FFCP PHASE2:Hg19::chr17:63771073..63771114,-#_7f4e093949e24eb0389cec8c1eb977ab | p@chr17:63771073..63771114, - |
2.55e-29 | FFCP PHASE1:Hg19::chr6:102247584..102247620,+#_7f4e093949e24eb0389cec8c1eb977ab | p@chr6:102247584..102247620, + |
2.55e-29 | FFCP PHASE1:Hg19::chr2:158443804..158443809,-#_7f4e093949e24eb0389cec8c1eb977ab | p@chr2:158443804..158443809, - |
2.55e-29 | FFCP PHASE2:Hg19::chr7:27282288..27282293,-#_7f4e093949e24eb0389cec8c1eb977ab | p2@ENST00000519050 |
2.55e-29 | FFCP PHASE1:Hg19::chr16:1631093..1631103,-#_7f4e093949e24eb0389cec8c1eb977ab | p@chr16:1631093..1631103, - |
2.55e-29 | FFCP PHASE1:Hg19::chr2:130067633..130067649,-#_7f4e093949e24eb0389cec8c1eb977ab | p@chr2:130067633..130067649, - |
1.85e-28 | FFCP PHASE1:Hg19::chr8:140614358..140614378,-#_22d048b72cb2af68de5664f918b7e726 | p1@KCNK9 |
1.85e-28 | FFCP PHASE2:Hg19::chr8:140614358..140614378,-#_22d048b72cb2af68de5664f918b7e726 | p1@KCNK9 |
1.19e-25 | FFCP PHASE2:Hg19::chr19:3068219..3068225,-#_69026c5fdaf3e98777a9e12c2d691d53 | p@chr19:3068219..3068225, - |
1.19e-25 | FFCP PHASE1:Hg19::chr19:3068219..3068225,-#_69026c5fdaf3e98777a9e12c2d691d53 | p@chr19:3068219..3068225, - |
1.27e-25 | FFCP PHASE2:Hg19::chr2:2850815..2850821,-#_58d0944087c6c9522789e92a42446e58 | p@chr2:2850815..2850821, - |
1.27e-25 | FFCP PHASE1:Hg19::chr2:2850815..2850821,-#_58d0944087c6c9522789e92a42446e58 | p@chr2:2850815..2850821, - |
1.37e-23 | FFCP PHASE1:Hg19::chr12:109747040..109747055,-#_7defa3350b2ec14f5772b10eeb43dc91 | p1@FOXN4 |
1.37e-23 | FFCP PHASE2:Hg19::chr12:109747040..109747055,-#_7defa3350b2ec14f5772b10eeb43dc91 | p1@FOXN4 |
5.56e-23 | FFCP PHASE1:Hg19::chr13:28494130..28494168,+#_e9a9bb14d484f82911a33d3df7e5cb3f | p1@PDX1 |
5.56e-23 | FFCP PHASE2:Hg19::chr13:28494130..28494168,+#_e9a9bb14d484f82911a33d3df7e5cb3f | p1@PDX1 |
7.83e-23 | FFCP PHASE2:Hg19::chr3:34281730..34281733,+#_bdf74c8f2acc057c2018381a2106615b | p@chr3:34281730..34281733, + |
7.83e-23 | FFCP PHASE1:Hg19::chr3:34281730..34281733,+#_bdf74c8f2acc057c2018381a2106615b | p@chr3:34281730..34281733, + |
1.46e-22 | FFCP PHASE1:Hg19::chr7:13524410..13524415,+#_c36bf6d289d40b78ba27baeece5d4fdb | p@chr7:13524410..13524415, + |
1.46e-22 | FFCP PHASE2:Hg19::chr7:13524410..13524415,+#_c36bf6d289d40b78ba27baeece5d4fdb | p@chr7:13524410..13524415, + |
5.6e-22 | FFCP PHASE1:Hg19::chr7:142457254..142457278,+#_03716795fd4355ffb5ddfdb3d179b31e | p3@PRSS1 |
5.6e-22 | FFCP PHASE2:Hg19::chr7:142457254..142457278,+#_03716795fd4355ffb5ddfdb3d179b31e | p3@PRSS1 |
5.79e-22 | FFCP PHASE2:Hg19::chr6:31683157..31683167,+#_34c26525943e207fc69e7b45375da1c9 | p3@LY6G6D |
5.79e-22 | FFCP PHASE1:Hg19::chr6:31683157..31683167,+#_34c26525943e207fc69e7b45375da1c9 | p3@LY6G6D |
6.21e-22 | FFCP PHASE2:Hg19::chr17:70614580..70614613,-#_a5f97c29276ba5be0e57cc4811ab8bd6 | p@chr17:70614580..70614613, - |
6.21e-22 | FFCP PHASE1:Hg19::chr17:70614580..70614613,-#_a5f97c29276ba5be0e57cc4811ab8bd6 | p@chr17:70614580..70614613, - |
6.67e-22 | FFCP PHASE2:Hg19::chr21:43815581..43815595,-#_ab2d05383d9c2b83cd114a05ea3d2d76 | p5@TMPRSS3 |
6.67e-22 | FFCP PHASE1:Hg19::chr21:43815581..43815595,-#_ab2d05383d9c2b83cd114a05ea3d2d76 | p5@TMPRSS3 |
7.17e-22 | FFCP PHASE1:Hg19::chr1:163025530..163025535,-#_85f1471e7fa7966f3660e4ee98110a79 | p@chr1:163025530..163025535, - |
7.17e-22 | FFCP PHASE2:Hg19::chr1:163025530..163025535,-#_85f1471e7fa7966f3660e4ee98110a79 | p@chr1:163025530..163025535, - |
8.27e-22 | FFCP PHASE2:Hg19::chr1:163025442..163025452,-#_2afd870e8fb69f6e0e185fec006b0a0f | p@chr1:163025442..163025452, - |
8.27e-22 | FFCP PHASE1:Hg19::chr1:163025442..163025452,-#_2afd870e8fb69f6e0e185fec006b0a0f | p@chr1:163025442..163025452, - |
4.85e-21 | FFCP PHASE2:Hg19::chr7:13447097..13447101,+#_0bb5e9a5e4671e970e60d72db0fdf507 | p@chr7:13447097..13447101, + |
4.85e-21 | FFCP PHASE1:Hg19::chr7:13447097..13447101,+#_0bb5e9a5e4671e970e60d72db0fdf507 | p@chr7:13447097..13447101, + |
6.72e-21 | FFCP PHASE2:Hg19::chr13:72358093..72358097,-#_d16b04437f2ee582512b8fb88ed688e3 | p@chr13:72358093..72358097, - |
6.72e-21 | FFCP PHASE1:Hg19::chr13:72358093..72358097,-#_d16b04437f2ee582512b8fb88ed688e3 | p@chr13:72358093..72358097, - |
5.89e-20 | FFCP PHASE2:Hg19::chr6:1054763..1054800,-#_c662d2b57ec2d6c67be125d4675643c0 | p@chr6:1054763..1054800, - |
5.89e-20 | FFCP PHASE1:Hg19::chr7:19417679..19417693,+#_c662d2b57ec2d6c67be125d4675643c0 | p@chr7:19417679..19417693, + |
5.89e-20 | FFCP PHASE2:Hg19::chr7:150499243..150499249,-#_c662d2b57ec2d6c67be125d4675643c0 | p@chr7:150499243..150499249, - |
5.89e-20 | FFCP PHASE2:Hg19::chr17:27382155..27382164,+#_c662d2b57ec2d6c67be125d4675643c0 | p@chr17:27382155..27382164, + |
5.89e-20 | FFCP PHASE1:Hg19::chr2:130067654..130067664,-#_c662d2b57ec2d6c67be125d4675643c0 | p@chr2:130067654..130067664, - |
5.89e-20 | FFCP PHASE2:Hg19::chr11:90181744..90181756,+#_c662d2b57ec2d6c67be125d4675643c0 | p@chr11:90181744..90181756, + |
5.89e-20 | FFCP PHASE2:Hg19::chr1:223853431..223853436,-#_c662d2b57ec2d6c67be125d4675643c0 | p4@CAPN8 |
5.89e-20 | FFCP PHASE2:Hg19::chr1:52442908..52442917,-#_c662d2b57ec2d6c67be125d4675643c0 | p9@RAB3B |
5.89e-20 | FFCP PHASE1:Hg19::chr17:27382155..27382164,+#_c662d2b57ec2d6c67be125d4675643c0 | p@chr17:27382155..27382164, + |
5.89e-20 | FFCP PHASE1:Hg19::chr6:1054763..1054800,-#_c662d2b57ec2d6c67be125d4675643c0 | p@chr6:1054763..1054800, - |
5.89e-20 | FFCP PHASE1:Hg19::chr11:90181744..90181756,+#_c662d2b57ec2d6c67be125d4675643c0 | p@chr11:90181744..90181756, + |
5.89e-20 | FFCP PHASE1:Hg19::chr7:150499243..150499249,-#_c662d2b57ec2d6c67be125d4675643c0 | p@chr7:150499243..150499249, - |
5.89e-20 | FFCP PHASE1:Hg19::chr1:223853431..223853436,-#_c662d2b57ec2d6c67be125d4675643c0 | p4@CAPN8 |
5.89e-20 | FFCP PHASE1:Hg19::chr1:52442908..52442917,-#_c662d2b57ec2d6c67be125d4675643c0 | p9@RAB3B |
5.89e-20 | FFCP PHASE2:Hg19::chr7:19417679..19417693,+#_c662d2b57ec2d6c67be125d4675643c0 | p@chr7:19417679..19417693, + |
5.89e-20 | FFCP PHASE2:Hg19::chr2:130067654..130067664,-#_c662d2b57ec2d6c67be125d4675643c0 | p@chr2:130067654..130067664, - |
6.48e-20 | FFCP PHASE2:Hg19::chr18:53165290..53165321,-#_799802610c761be5176ee6e3509f267e | p@chr18:53165290..53165321, - |
6.48e-20 | FFCP PHASE2:Hg19::chr19:48876344..48876351,+#_799802610c761be5176ee6e3509f267e | p@chr19:48876344..48876351, + |
6.48e-20 | FFCP PHASE1:Hg19::chr2:50452322..50452343,+#_799802610c761be5176ee6e3509f267e | p@chr2:50452322..50452343, + |
6.48e-20 | FFCP PHASE2:Hg19::chr10:102207688..102207707,+#_799802610c761be5176ee6e3509f267e | p@chr10:102207688..102207707, + |
6.48e-20 | FFCP PHASE2:Hg19::chr1:165198157..165198181,-#_799802610c761be5176ee6e3509f267e | p@chr1:165198157..165198181, - |
6.48e-20 | FFCP PHASE1:Hg19::chr12:28004664..28004668,+#_799802610c761be5176ee6e3509f267e | p@chr12:28004664..28004668, + |
6.48e-20 | FFCP PHASE1:Hg19::chr8:61761056..61761069,+#_799802610c761be5176ee6e3509f267e | p@chr8:61761056..61761069, + |
6.48e-20 | FFCP PHASE1:Hg19::chr7:13531282..13531289,+#_799802610c761be5176ee6e3509f267e | p@chr7:13531282..13531289, + |
6.48e-20 | FFCP PHASE1:Hg19::chr11:90181710..90181723,+#_799802610c761be5176ee6e3509f267e | p@chr11:90181710..90181723, + |
6.48e-20 | FFCP PHASE1:Hg19::chr19:48876344..48876351,+#_799802610c761be5176ee6e3509f267e | p@chr19:48876344..48876351, + |
6.48e-20 | FFCP PHASE1:Hg19::chr18:53165290..53165321,-#_799802610c761be5176ee6e3509f267e | p@chr18:53165290..53165321, - |
6.48e-20 | FFCP PHASE2:Hg19::chr8:128908649..128908661,+#_799802610c761be5176ee6e3509f267e | p@chr8:128908649..128908661, + |
6.48e-20 | FFCP PHASE2:Hg19::chr9:12159267..12159271,+#_799802610c761be5176ee6e3509f267e | p@chr9:12159267..12159271, + |
6.48e-20 | FFCP PHASE2:Hg19::chr8:128808502..128808513,+#_799802610c761be5176ee6e3509f267e | p@chr8:128808502..128808513, + |
6.48e-20 | FFCP PHASE1:Hg19::chr1:165198157..165198181,-#_799802610c761be5176ee6e3509f267e | p@chr1:165198157..165198181, - |
6.48e-20 | FFCP PHASE1:Hg19::chr10:102207688..102207707,+#_799802610c761be5176ee6e3509f267e | p@chr10:102207688..102207707, + |
6.48e-20 | FFCP PHASE2:Hg19::chr2:50452322..50452343,+#_799802610c761be5176ee6e3509f267e | p@chr2:50452322..50452343, + |
6.48e-20 | FFCP PHASE2:Hg19::chr7:13531282..13531289,+#_799802610c761be5176ee6e3509f267e | p@chr7:13531282..13531289, + |
6.48e-20 | FFCP PHASE1:Hg19::chr8:128908649..128908661,+#_799802610c761be5176ee6e3509f267e | p@chr8:128908649..128908661, + |
6.48e-20 | FFCP PHASE1:Hg19::chr8:128808502..128808513,+#_799802610c761be5176ee6e3509f267e | p@chr8:128808502..128808513, + |
6.48e-20 | FFCP PHASE1:Hg19::chr9:12159267..12159271,+#_799802610c761be5176ee6e3509f267e | p@chr9:12159267..12159271, + |
6.48e-20 | FFCP PHASE2:Hg19::chr12:28004664..28004668,+#_799802610c761be5176ee6e3509f267e | p@chr12:28004664..28004668, + |
6.48e-20 | FFCP PHASE2:Hg19::chr8:61761056..61761069,+#_799802610c761be5176ee6e3509f267e | p@chr8:61761056..61761069, + |
6.48e-20 | FFCP PHASE2:Hg19::chr11:90181710..90181723,+#_799802610c761be5176ee6e3509f267e | p@chr11:90181710..90181723, + |
7.13e-20 | FFCP PHASE2:Hg19::chr8:38441495..38441504,+#_cd35a5c5b2ad16ae69209dcddd043599 | p@chr8:38441495..38441504, + |
7.13e-20 | FFCP PHASE2:Hg19::chr8:128900203..128900207,+#_cd35a5c5b2ad16ae69209dcddd043599 | p@chr8:128900203..128900207, + |