Personal tools

DOID:3307

From FANTOM5_SSTAR

Jump to: navigation, search

Name:teratoma
Namespace:FANTOM
Definition:"A germ cell and embryonal cancer that is an encapsulated tumor with tissue or organ components resembling normal derivatives of all three germ layers." [url:http://en.wikipedia.org/wiki/Teratoma]
Xrefs:
links:

MSH:D013724
NCI:C3403
SNOMEDCT_2010_1_31:189844009
SNOMEDCT_2010_1_31:189846006
SNOMEDCT_2010_1_31:189848007
SNOMEDCT_2010_1_31:55818009

UMLS_CUI:C0039538
Synonyms: "teratoma" EXACT [NCI2004_11_17:C3403]
"teratoma" EXACT [CSP2005:2000-4962]
"teratoma NOS" EXACT [SNOMEDCT_2005_07_31:189848007]
"teratoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189846006]
"teratoma, no ICD-O subtype (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:55818009]
"Teratomas (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189844009]

Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.

link to ontology dataset
data

Parents

is_a:DOID:3095(germ cell and embryonal cancer)



Children


is a:FF:10694-109G1 (tridermal teratoma cell line:HGRT),FF:10695-109G2 (sacrococcigeal teratoma cell line:HTST)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3307 (teratoma), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data

P-valueFFCPShort description
1.55e-98FFCP PHASE2:Hg19::chr17:60085374..60085376,-#_61bafa539f19b3842ef5ace14a26c40ap1@LOC100129112
1.55e-98FFCP PHASE2:Hg19::chr14:53968294..53968300,-#_61bafa539f19b3842ef5ace14a26c40ap@chr14:53968294..53968300, -
1.55e-98FFCP PHASE1:Hg19::chr17:60085374..60085376,-#_61bafa539f19b3842ef5ace14a26c40ap1@LOC100129112
1.55e-98FFCP PHASE1:Hg19::chr14:53968294..53968300,-#_61bafa539f19b3842ef5ace14a26c40ap@chr14:53968294..53968300, -
7.41e-67FFCP PHASE1:Hg19::chr5:134369177..134369188,+#_73178ca70fb6e9fa54d79c5453b850fbp2@ENST00000505828
7.41e-67FFCP PHASE2:Hg19::chr5:134369177..134369188,+#_73178ca70fb6e9fa54d79c5453b850fbp2@ENST00000505828
1.04e-66FFCP PHASE2:Hg19::chr7:105865829..105865838,-#_63b28e333a4d264b0165faf25cd1ca52p@chr7:105865829..105865838, -
1.04e-66FFCP PHASE1:Hg19::chr7:105865829..105865838,-#_63b28e333a4d264b0165faf25cd1ca52-, p@chr7:105865829..105865838
3.58e-57FFCP PHASE1:Hg19::chr4:148885940..148885946,+#_d3a6340551d49aa41063d96e7a68813cp@chr4:148885940..148885946, +
3.58e-57FFCP PHASE2:Hg19::chr4:148885940..148885946,+#_d3a6340551d49aa41063d96e7a68813cp@chr4:148885940..148885946, +
2.74e-50FFCP PHASE1:Hg19::chr10:27951158..27951161,-#_ceb8ca59bb1ca647015d4b1c0b821be1p@chr10:27951158..27951161, -
2.74e-50FFCP PHASE2:Hg19::chr10:27951158..27951161,-#_ceb8ca59bb1ca647015d4b1c0b821be1p@chr10:27951158..27951161, -
4.52e-50FFCP PHASE2:Hg19::chr9:16474824..16474836,-#_09e655d3e50e641930672a34bf091d83p@chr9:16474824..16474836, -
4.52e-50FFCP PHASE1:Hg19::chr14:65410925..65410939,-#_09e655d3e50e641930672a34bf091d83p@chr14:65410925..65410939, -
4.52e-50FFCP PHASE2:Hg19::chr14:65410925..65410939,-#_09e655d3e50e641930672a34bf091d83p@chr14:65410925..65410939, -
4.52e-50FFCP PHASE1:Hg19::chr9:16539885..16539894,-#_09e655d3e50e641930672a34bf091d83p@chr9:16539885..16539894, -
4.52e-50FFCP PHASE2:Hg19::chr9:16539885..16539894,-#_09e655d3e50e641930672a34bf091d83p@chr9:16539885..16539894, -
4.52e-50FFCP PHASE2:Hg19::chr15:71682167..71682168,+#_09e655d3e50e641930672a34bf091d83p@chr15:71682167..71682168, +
4.52e-50FFCP PHASE1:Hg19::chr10:63700100..63700112,+#_09e655d3e50e641930672a34bf091d83p@chr10:63700100..63700112, +
4.52e-50FFCP PHASE1:Hg19::chr15:71682167..71682168,+#_09e655d3e50e641930672a34bf091d83p@chr15:71682167..71682168, +
4.52e-50FFCP PHASE2:Hg19::chr10:63700100..63700112,+#_09e655d3e50e641930672a34bf091d83p@chr10:63700100..63700112, +
4.52e-50FFCP PHASE1:Hg19::chr9:16474824..16474836,-#_09e655d3e50e641930672a34bf091d83p@chr9:16474824..16474836, -
2.55e-45FFCP PHASE1:Hg19::chr8:119964499..119964504,+#_248e62aa7561b3b99b07935f40a61101p@chr8:119964499..119964504, +
2.55e-45FFCP PHASE2:Hg19::chr8:119964499..119964504,+#_248e62aa7561b3b99b07935f40a61101p@chr8:119964499..119964504, +
5.0e-45FFCP PHASE1:Hg19::chr15:37386163..37386175,-#_a7760c2e710a831275758a8897491492p52@MEIS2
5.0e-45FFCP PHASE2:Hg19::chr15:37386163..37386175,-#_a7760c2e710a831275758a8897491492p52@MEIS2
1.89e-37FFCP PHASE1:Hg19::chr4:99408386..99408389,-#_17cec5bf7c047a170590651da1230c58p@chr4:99408386..99408389, -
1.89e-37FFCP PHASE2:Hg19::chr4:99408386..99408389,-#_17cec5bf7c047a170590651da1230c58p@chr4:99408386..99408389, -
3.28e-37FFCP PHASE2:Hg19::chr12:72667203..72667215,+#_9d0934923d02c615ce712545bdb0a7f9p11@TRHDE
3.28e-37FFCP PHASE1:Hg19::chr12:72667203..72667215,+#_9d0934923d02c615ce712545bdb0a7f9p11@TRHDE
1.84e-34FFCP PHASE1:Hg19::chr4:120549047..120549058,-#_b82177fdbe31b48911dd05abbea565a6p18@PDE5A
1.84e-34FFCP PHASE2:Hg19::chr4:120549047..120549058,-#_b82177fdbe31b48911dd05abbea565a6p18@PDE5A
3.06e-34FFCP PHASE1:Hg19::chr1:156417689..156417693,-#_b79cfee872573c737c73d9852e44ba72p@chr1:156417689..156417693, -
3.06e-34FFCP PHASE2:Hg19::chr1:156417689..156417693,-#_b79cfee872573c737c73d9852e44ba72p@chr1:156417689..156417693, -
3.61e-34FFCP PHASE2:Hg19::chr2:179315588..179315596,-#_b99be99ba678e6bf0efbbba86de8f0abp10@PRKRA
3.61e-34FFCP PHASE1:Hg19::chr2:179315588..179315596,-#_b99be99ba678e6bf0efbbba86de8f0abp10@PRKRA
5.04e-34FFCP PHASE1:Hg19::chr16:74532763..74532767,-#_9d3f68691a66d94db9112ea66fbf650dp@chr16:74532763..74532767, -
5.04e-34FFCP PHASE2:Hg19::chr5:151573968..151573973,+#_9d3f68691a66d94db9112ea66fbf650dp@chr5:151573968..151573973, +
5.04e-34FFCP PHASE1:Hg19::chr5:151573968..151573973,+#_9d3f68691a66d94db9112ea66fbf650dp@chr5:151573968..151573973, +
5.04e-34FFCP PHASE2:Hg19::chr8:62381271..62381276,-#_9d3f68691a66d94db9112ea66fbf650dp@chr8:62381271..62381276, -
5.04e-34FFCP PHASE2:Hg19::chr15:71840450..71840454,+#_9d3f68691a66d94db9112ea66fbf650dp@chr15:71840450..71840454, +
5.04e-34FFCP PHASE1:Hg19::chr11:2407761..2407778,+#_9d3f68691a66d94db9112ea66fbf650dp26@CD81
5.04e-34FFCP PHASE1:Hg19::chr20:12989828..12989835,+#_9d3f68691a66d94db9112ea66fbf650dp7@SPTLC3
5.04e-34FFCP PHASE2:Hg19::chr11:2407761..2407778,+#_9d3f68691a66d94db9112ea66fbf650dp26@CD81
5.04e-34FFCP PHASE2:Hg19::chr19:13397481..13397502,-#_9d3f68691a66d94db9112ea66fbf650dp@chr19:13397481..13397502, -
5.04e-34FFCP PHASE1:Hg19::chr8:62381271..62381276,-#_9d3f68691a66d94db9112ea66fbf650dp@chr8:62381271..62381276, -
5.04e-34FFCP PHASE1:Hg19::chr19:13397481..13397502,-#_9d3f68691a66d94db9112ea66fbf650dp@chr19:13397481..13397502, -
5.04e-34FFCP PHASE1:Hg19::chr5:134589628..134589644,+#_9d3f68691a66d94db9112ea66fbf650dp@chr5:134589628..134589644, +
5.04e-34FFCP PHASE2:Hg19::chr20:12989828..12989835,+#_9d3f68691a66d94db9112ea66fbf650dp7@SPTLC3
5.04e-34FFCP PHASE2:Hg19::chr16:74532763..74532767,-#_9d3f68691a66d94db9112ea66fbf650dp@chr16:74532763..74532767, -
5.04e-34FFCP PHASE2:Hg19::chr5:134589628..134589644,+#_9d3f68691a66d94db9112ea66fbf650dp@chr5:134589628..134589644, +
5.04e-34FFCP PHASE1:Hg19::chr15:71840450..71840454,+#_9d3f68691a66d94db9112ea66fbf650dp@chr15:71840450..71840454, +
7.05e-34FFCP PHASE2:Hg19::chr4:114901128..114901136,-#_517029a17090f148eba4bcc3f84387a6p20@ARSJ
7.05e-34FFCP PHASE1:Hg19::chr4:114901128..114901136,-#_517029a17090f148eba4bcc3f84387a6p20@ARSJ
7.05e-34FFCP PHASE2:Hg19::chr12:69078351..69078356,+#_517029a17090f148eba4bcc3f84387a6p1@ENST00000481005
7.05e-34FFCP PHASE1:Hg19::chr22:48982101..48982114,-#_517029a17090f148eba4bcc3f84387a6p@chr22:48982101..48982114, -
7.05e-34FFCP PHASE2:Hg19::chr22:48982101..48982114,-#_517029a17090f148eba4bcc3f84387a6p@chr22:48982101..48982114, -
7.05e-34FFCP PHASE1:Hg19::chr12:69078351..69078356,+#_517029a17090f148eba4bcc3f84387a6p1@ENST00000481005
7.05e-34FFCP PHASE1:Hg19::chr20:43838233..43838282,+#_517029a17090f148eba4bcc3f84387a6p@chr20:43838233..43838282, +
7.05e-34FFCP PHASE2:Hg19::chr15:64423903..64423911,+#_517029a17090f148eba4bcc3f84387a6p9@SNX1
7.05e-34FFCP PHASE2:Hg19::chr20:43838233..43838282,+#_517029a17090f148eba4bcc3f84387a6p@chr20:43838233..43838282, +
7.05e-34FFCP PHASE1:Hg19::chr15:64423903..64423911,+#_517029a17090f148eba4bcc3f84387a6p9@SNX1
3.92e-32FFCP PHASE1:Hg19::chr1:246147829..246147864,-#_27d25cbac9925fe4f9ccbeffebb03ae8p@chr1:246147829..246147864, -
3.92e-32FFCP PHASE2:Hg19::chr1:246147829..246147864,-#_27d25cbac9925fe4f9ccbeffebb03ae8p@chr1:246147829..246147864, -
1.17e-31FFCP PHASE2:Hg19::chr2:217537210..217537213,-#_5fb47740b105533c8e4f45c0e39d58b0p54@IGFBP5
1.17e-31FFCP PHASE1:Hg19::chr2:217537210..217537213,-#_5fb47740b105533c8e4f45c0e39d58b0p54@IGFBP5
1.24e-29FFCP PHASE2:Hg19::chr16:86498111..86498151,-#_cc0bffee2d01be2be006d81acc5f33a3-, p@chr16:86498111..86498151
1.24e-29FFCP PHASE1:Hg19::chr16:86498111..86498151,-#_cc0bffee2d01be2be006d81acc5f33a3p@chr16:86498111..86498151, -
3.94e-29FFCP PHASE1:Hg19::chr15:33025921..33025938,+#_29571038f2d0f52e79443d296b5e2de2p@chr15:33025921..33025938, +
3.94e-29FFCP PHASE2:Hg19::chr15:33025921..33025938,+#_29571038f2d0f52e79443d296b5e2de2p@chr15:33025921..33025938, +
3.6e-28FFCP PHASE1:Hg19::chr2:217540334..217540344,-#_e0e69b1959044839f53a69f802ee9a07p59@IGFBP5
3.6e-28FFCP PHASE2:Hg19::chr2:217540334..217540344,-#_e0e69b1959044839f53a69f802ee9a07p59@IGFBP5
1.67e-26FFCP PHASE1:Hg19::chr13:92602539..92602541,+#_46ef1b90fff1a655e8531e2a410fca55p@chr13:92602539..92602541, +
1.67e-26FFCP PHASE2:Hg19::chr13:92602539..92602541,+#_46ef1b90fff1a655e8531e2a410fca55p@chr13:92602539..92602541, +
3.16e-26FFCP PHASE1:Hg19::chr19:13617378..13617399,-#_0bf4f2308f18cde4973533a0ffd2166cp8@CACNA1A
3.16e-26FFCP PHASE2:Hg19::chr19:13617378..13617399,-#_0bf4f2308f18cde4973533a0ffd2166cp8@CACNA1A
3.59e-26FFCP PHASE2:Hg19::chr2:189922013..189922016,-#_91b68c93d82f1491bca3290e83b19678p@chr2:189922013..189922016, -
3.59e-26FFCP PHASE1:Hg19::chr6:56311952..56311957,-#_91b68c93d82f1491bca3290e83b19678p@chr6:56311952..56311957, -
3.59e-26FFCP PHASE1:Hg19::chr2:189922013..189922016,-#_91b68c93d82f1491bca3290e83b19678p@chr2:189922013..189922016, -
3.59e-26FFCP PHASE2:Hg19::chr6:56311952..56311957,-#_91b68c93d82f1491bca3290e83b19678p@chr6:56311952..56311957, -
4.32e-26FFCP PHASE1:Hg19::chr13:33686841..33686842,-#_cf54ac2009e65766c82f994936a4a0bdp@chr13:33686841..33686842, -
4.32e-26FFCP PHASE2:Hg19::chr13:33686841..33686842,-#_cf54ac2009e65766c82f994936a4a0bdp@chr13:33686841..33686842, -
4.32e-26FFCP PHASE1:Hg19::chr10:44285890..44285891,-#_cf54ac2009e65766c82f994936a4a0bdp1@HNRNPA3P1
4.32e-26FFCP PHASE2:Hg19::chr10:44285890..44285891,-#_cf54ac2009e65766c82f994936a4a0bdp1@HNRNPA3P1
5.56e-26FFCP PHASE2:Hg19::chr3:41313860..41313862,+#_c24b00e831e6cd5ddad00f9f46bc9db1p@chr3:41313860..41313862, +
5.56e-26FFCP PHASE2:Hg19::chr9:94454113..94454115,-#_c24b00e831e6cd5ddad00f9f46bc9db1p@chr9:94454113..94454115, -
5.56e-26FFCP PHASE1:Hg19::chr6:75916067..75916078,-#_c24b00e831e6cd5ddad00f9f46bc9db1p30@COL12A1
5.56e-26FFCP PHASE1:Hg19::chr3:114061988..114061990,-#_c24b00e831e6cd5ddad00f9f46bc9db1p@chr3:114061988..114061990, -
5.56e-26FFCP PHASE2:Hg19::chr10:63878539..63878542,+#_c24b00e831e6cd5ddad00f9f46bc9db1p@chr10:63878539..63878542, +
5.56e-26FFCP PHASE2:Hg19::chr14:105332461..105332506,+#_c24b00e831e6cd5ddad00f9f46bc9db1p@chr14:105332461..105332506, +
5.56e-26FFCP PHASE2:Hg19::chr5:14437967..14437970,+#_c24b00e831e6cd5ddad00f9f46bc9db1p@chr5:14437967..14437970, +
5.56e-26FFCP PHASE2:Hg19::chr12:69996323..69996329,+#_c24b00e831e6cd5ddad00f9f46bc9db1p@chr12:69996323..69996329, +
5.56e-26FFCP PHASE1:Hg19::chr15:74914322..74914330,-#_c24b00e831e6cd5ddad00f9f46bc9db1p@chr15:74914322..74914330, -
5.56e-26FFCP PHASE2:Hg19::chr17:61228410..61228414,+#_c24b00e831e6cd5ddad00f9f46bc9db1p@chr17:61228410..61228414, +
5.56e-26FFCP PHASE1:Hg19::chr3:41313860..41313862,+#_c24b00e831e6cd5ddad00f9f46bc9db1p@chr3:41313860..41313862, +
5.56e-26FFCP PHASE1:Hg19::chr2:33519090..33519092,+#_c24b00e831e6cd5ddad00f9f46bc9db1p@chr2:33519090..33519092, +
5.56e-26FFCP PHASE2:Hg19::chr18:65175930..65175941,+#_c24b00e831e6cd5ddad00f9f46bc9db1p@chr18:65175930..65175941, +
5.56e-26FFCP PHASE2:Hg19::chr16:66600652..66600697,+#_c24b00e831e6cd5ddad00f9f46bc9db1p4@CMTM1
5.56e-26FFCP PHASE2:Hg19::chr3:114061988..114061990,-#_c24b00e831e6cd5ddad00f9f46bc9db1p@chr3:114061988..114061990, -
5.56e-26FFCP PHASE1:Hg19::chr16:66600652..66600697,+#_c24b00e831e6cd5ddad00f9f46bc9db1p4@CMTM1

Retrieved from "http://f5-webapp2.gsc.riken.jp/5/sstar/index.php?title=DOID:3307&oldid=3275677"