DOID:7
From FANTOM5_SSTAR
Name: | disease of anatomical entity |
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Namespace: | FANTOM |
Definition: | "A disease that manifests in a defined anatomical structure." [DO:wk\,ls, URL:http://www2.merriam-webster.com/cgi-bin/mwmednlm?book |
Alt_id: |
DOID:1 DOID:2 DOID:5 DOID:71 DOID:72 DOID:8 |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | DOID:4(disease) |
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Children
is a: | FF:0100372 (bone cancer cell),FF:0102817 (esophageal cancer cell line),FF:10810-111A9 (adrenal cortex adenocarcinoma cell line:SW-13),DOID:1287 (cardiovascular system disease),DOID:1579 (respiratory system disease),DOID:17 (musculoskeletal system disease),DOID:2914 (immune system disease),DOID:77 (gastrointestinal system disease),DOID:863 (nervous system disease) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10050-101G5 (heart, adult, diseased post-infarction, donor1)
- 10051-101G6 (heart, adult, diseased, donor1)
- 10411-106B6 (renal cell carcinoma cell line:OS-RC-2)
- 10419-106C5 (breast carcinoma cell line:MDA-MB-453)
- 10428-106D5 (anaplastic carcinoma cell line:8305C)
- 10432-106D9 (bile duct carcinoma cell line:HuCCT1)
- 10434-106E2 (oral squamous cell carcinoma cell line:Ca9-22)
- 10437-106E5 (papillary adenocarcinoma cell line:8505C)
- 10439-106E7 (prostate cancer cell line:PC-3)
- 10440-106E8
... further results Mouse (Mus musculus)
- 10050-101G5 (heart, adult, diseased post-infarction, donor1)
- 10051-101G6 (heart, adult, diseased, donor1)
- 10411-106B6 (renal cell carcinoma cell line:OS-RC-2)
- 10419-106C5 (breast carcinoma cell line:MDA-MB-453)
- 10428-106D5 (anaplastic carcinoma cell line:8305C)
- 10432-106D9 (bile duct carcinoma cell line:HuCCT1)
- 10434-106E2 (oral squamous cell carcinoma cell line:Ca9-22)
- 10437-106E5 (papillary adenocarcinoma cell line:8505C)
- 10439-106E7 (prostate cancer cell line:PC-3)
- 10440-106E8
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:7 (disease of anatomical entity), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data