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MCL coexpression mm9:52

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Phase1 CAGE Peaks

  Short description
Mm9::chr10:11211907..11211924,- p@chr10:11211907..11211924
-
Mm9::chr10:114821977..114822005,+ p2@Zfc3h1
Mm9::chr10:115982875..115982879,- p@chr10:115982875..115982879
-
Mm9::chr10:122423106..122423120,- p1@Mirlet7i
Mm9::chr10:126497191..126497204,- p5@March9
Mm9::chr10:127058016..127058087,- p1@Lrp1
Mm9::chr10:22923636..22923641,- p@chr10:22923636..22923641
-
Mm9::chr10:23069997..23070057,- p1@Eya4
Mm9::chr10:23869250..23869273,+ p3@Stx7
Mm9::chr10:25016861..25016907,- p@chr10:25016861..25016907
-
Mm9::chr10:25079656..25079693,+ p1@Epb4.1l2
Mm9::chr10:26063315..26063316,- p@chr10:26063315..26063316
-
Mm9::chr10:36855302..36855344,- -
p@chr10:36855302..36855344
Mm9::chr10:36855453..36855459,- p@chr10:36855453..36855459
-
Mm9::chr10:36855781..36855793,- p@chr10:36855781..36855793
-
Mm9::chr10:36855821..36855858,- p@chr10:36855821..36855858
-
Mm9::chr10:36855861..36855866,- p@chr10:36855861..36855866
-
Mm9::chr10:36855869..36855883,- p@chr10:36855869..36855883
-
Mm9::chr10:36855898..36855907,- p@chr10:36855898..36855907
-
Mm9::chr10:36855912..36855926,- p@chr10:36855912..36855926
-
Mm9::chr10:36857118..36857141,- p@chr10:36857118..36857141
-
Mm9::chr10:40069071..40069193,+ p1@Cdk19
Mm9::chr10:42481346..42481413,+ p1@Sec63
Mm9::chr10:57822628..57822633,+ p@chr10:57822628..57822633
+
Mm9::chr10:70577904..70577908,- p@chr10:70577904..70577908
-
Mm9::chr10:70619188..70619191,- p@chr10:70619188..70619191
-
Mm9::chr10:70622322..70622329,- p6@Bicc1
Mm9::chr10:75495343..75495405,+ p1@Zfp280b
Mm9::chr10:76058664..76058690,- p@chr10:76058664..76058690
-
Mm9::chr10:76347207..76347211,- p@chr10:76347207..76347211
-
Mm9::chr10:78054690..78054698,- p4@Syde1
Mm9::chr10:81038002..81038014,+ p3@Tle2
Mm9::chr10:81038022..81038046,+ p1@Tle2
Mm9::chr10:81038051..81038072,+ p2@Tle2
Mm9::chr10:83903250..83903262,- p4@Nuak1
Mm9::chr10:83903281..83903292,- p5@Nuak1
Mm9::chr10:83903336..83903349,- p2@Nuak1
Mm9::chr10:86168230..86168237,- p1@Hsp90b1
Mm9::chr11:100831471..100831489,- p5@Ptrf
Mm9::chr11:101329478..101329489,+ p8@Rnd2
Mm9::chr11:109472731..109472740,- p3@Wipi1
Mm9::chr11:32355121..32355140,+ p3@Ubtd2
Mm9::chr11:44431687..44431706,+ p2@Ebf1
Mm9::chr11:44431710..44431725,+ p7@Ebf1
Mm9::chr11:44481060..44481062,+ p@chr11:44481060..44481062
+
Mm9::chr11:44489167..44489174,+ p@chr11:44489167..44489174
+
Mm9::chr11:69659876..69659889,+ p5@Plscr3
Mm9::chr11:75302895..75302899,+ p@chr11:75302895..75302899
+
Mm9::chr11:75578130..75578141,+ p@chr11:75578130..75578141
+
Mm9::chr11:94189411..94189422,+ p5@Ankrd40
Mm9::chr11:94335700..94335718,- p3@Cacna1g
Mm9::chr11:94813644..94813661,+ p@chr11:94813644..94813661
+
Mm9::chr11:97524509..97524595,+ p1@Mllt6
Mm9::chr11:98656809..98656888,+ p1@Msl1
Mm9::chr12:109733490..109733494,+ p@chr12:109733490..109733494
+
Mm9::chr12:56937319..56937348,+ p2@Brms1l
Mm9::chr12:56937352..56937395,+ p1@Brms1l
Mm9::chr12:60162390..60162399,- p2@Gm13880
p2@Trappc6b
Mm9::chr12:79849942..79849958,+ p3@Mpp5
Mm9::chr12:81209834..81209858,- p@chr12:81209834..81209858
-
Mm9::chr13:104564546..104564652,- p1@Srek1
Mm9::chr13:120218476..120218487,+ p@chr13:120218476..120218487
+
Mm9::chr13:19711689..19711696,- p2@Epdr1
Mm9::chr13:20537153..20537158,+ p@chr13:20537153..20537158
+
Mm9::chr13:21622953..21622972,- p2@Zfp192
Mm9::chr13:44832041..44832044,+ p@chr13:44832041..44832044
+
Mm9::chr13:45097414..45097486,- p1@Dtnbp1
Mm9::chr13:50513294..50513301,+ p4@Fbxw17
Mm9::chr13:74946007..74946020,- p13@Cast
Mm9::chr14:103745856..103745878,- p2@Mycbp2
Mm9::chr14:14787540..14787543,- p@chr14:14787540..14787543
-
Mm9::chr14:50681955..50681968,+ p@chr14:50681955..50681968
+
Mm9::chr14:70920061..70920075,- p4@Bmp1
Mm9::chr14:90956465..90956495,+ p@chr14:90956465..90956495
+
Mm9::chr14:90956535..90956563,- p@chr14:90956535..90956563
-
Mm9::chr15:101046114..101046118,- p@chr15:101046114..101046118
-
Mm9::chr15:102300965..102300977,+ p1@Pcbp2
Mm9::chr15:102455867..102455930,- p1@Atf7
Mm9::chr15:11835364..11835378,- p@chr15:11835364..11835378
-
Mm9::chr15:40486566..40486600,+ p1@Zfpm2
Mm9::chr15:41620312..41620324,+ p17@Oxr1
Mm9::chr15:41620480..41620523,+ p2@Oxr1
Mm9::chr15:41680509..41680512,+ p@chr15:41680509..41680512
+
Mm9::chr15:42967592..42967594,- p@chr15:42967592..42967594
-
Mm9::chr15:42998631..42998636,- p@chr15:42998631..42998636
-
Mm9::chr15:44451097..44451176,+ p2@Ebag9
Mm9::chr15:56527038..56527040,+ p@chr15:56527038..56527040
+
Mm9::chr15:6531013..6531024,+ +
p@chr15:6531013..6531024
Mm9::chr15:66722976..66722992,+ p4@Wisp1
Mm9::chr15:66723019..66723030,+ p6@Wisp1
Mm9::chr15:75840005..75840021,+ p2@uc007wie.1
Mm9::chr15:75921922..75921960,- p3@Nrbp2
Mm9::chr15:75922024..75922083,- p1@Nrbp2
Mm9::chr15:77776220..77776230,- p6@Foxred2
Mm9::chr15:8049182..8049215,- p1@Wdr70
Mm9::chr15:8633613..8633616,- p@chr15:8633613..8633616
-
Mm9::chr15:96117291..96117350,+ p@chr15:96117291..96117350
+
Mm9::chr15:97536218..97536273,- p1@Rpap3
Mm9::chr15:99619302..99619304,- p@chr15:99619302..99619304
-
Mm9::chr16:11144060..11144083,+ p@chr16:11144060..11144083
+
Mm9::chr16:11144135..11144174,+ p1@ENSMUST00000102303
Mm9::chr16:25410824..25410841,+ p@chr16:25410824..25410841
+
Mm9::chr16:31664023..31664066,+ p3@Dlg1
Mm9::chr16:36934677..36934680,+ p3@Hcls1
Mm9::chr16:43697176..43697178,+ p@chr16:43697176..43697178
+
Mm9::chr16:57645189..57645193,- p@chr16:57645189..57645193
-
Mm9::chr16:65840052..65840056,+ p@chr16:65840052..65840056
+
Mm9::chr16:76348195..76348199,- p@chr16:76348195..76348199
-
Mm9::chr16:77643151..77643160,+ p@chr16:77643151..77643160
+
Mm9::chr17:36400435..36400436,- p@chr17:36400435..36400436
-
Mm9::chr17:39984998..39985000,+ p@chr17:39984998..39985000
+
Mm9::chr17:43250143..43250152,- p@chr17:43250143..43250152
-
Mm9::chr17:46385122..46385125,+ p2@Yipf3
Mm9::chr17:47766735..47766748,+ p@chr17:47766735..47766748
+
Mm9::chr17:51318574..51318668,- p1@Tbc1d5
Mm9::chr17:56175969..56176070,- p1@Sh3gl1
Mm9::chr17:56357985..56358060,- p@chr17:56357985..56358060
-
Mm9::chr17:69733108..69733129,+ p3@Zfp161
Mm9::chr17:71340057..71340067,- p6@Myl12b
Mm9::chr17:74624322..74624325,- p@chr17:74624322..74624325
-
Mm9::chr17:80113431..80113447,- p@chr17:80113431..80113447
-
Mm9::chr17:84911172..84911253,+ p1@Plekhh2
Mm9::chr18:33373486..33373506,- p2@Stard4
Mm9::chr18:43482321..43482324,- p8@uc008euf.1
Mm9::chr18:44811819..44811823,- p@chr18:44811819..44811823
-
Mm9::chr18:52677333..52677340,- p@chr18:52677333..52677340
-
Mm9::chr18:52689547..52689558,- p8@Lox
Mm9::chr18:60756420..60756422,- p@chr18:60756420..60756422
-
Mm9::chr18:61204924..61204935,+ p3@Pdgfrb
Mm9::chr18:67828876..67828882,- p@chr18:67828876..67828882
-
Mm9::chr18:79108960..79108962,- p@chr18:79108960..79108962
-
Mm9::chr19:10176322..10176329,- p5@Fads2
Mm9::chr19:34325562..34325568,- p@chr19:34325562..34325568
-
Mm9::chr19:38884457..38884462,- p@chr19:38884457..38884462
-
Mm9::chr19:45734950..45734983,- p1@Fbxw4
Mm9::chr19:45734986..45735010,- p2@Fbxw4
Mm9::chr19:55912318..55912321,+ p@chr19:55912318..55912321
+
Mm9::chr19:5796711..5796737,- p7@ENSMUST00000174808
Mm9::chr19:5796924..5796964,- p5@ENSMUST00000174808
Mm9::chr19:61126795..61126797,+ p@chr19:61126795..61126797
+
Mm9::chr19:8894706..8894739,+ p@chr19:8894706..8894739
+
Mm9::chr19:9063767..9063785,+ p1@Ahnak
Mm9::chr19:9092984..9093043,+ p@chr19:9092984..9093043
+
Mm9::chr19:9093071..9093074,+ p@chr19:9093071..9093074
+
Mm9::chr1:127573462..127573472,+ p8@Gpr39
Mm9::chr1:133423879..133423962,- p1@Srgap2
Mm9::chr1:134199470..134199476,+ p@chr1:134199470..134199476
+
Mm9::chr1:137128561..137128579,+ p2@ENSMUST00000110798
Mm9::chr1:138261634..138261640,+ p@chr1:138261634..138261640
+
Mm9::chr1:145549962..145549977,- p3@Cdc73
Mm9::chr1:158488890..158488937,+ p1@Abl2
Mm9::chr1:165243136..165243137,- p@chr1:165243136..165243137
-
Mm9::chr1:171905120..171905134,- p@chr1:171905120..171905134
-
Mm9::chr1:180459244..180459265,+ p1@Kif26b
Mm9::chr1:182872490..182872499,+ p10@Tmem63a
Mm9::chr1:38186463..38186524,- p1@Rev1
Mm9::chr1:39044611..39044624,+ p3@Pdcl3
Mm9::chr1:39957874..39957919,+ p2@Map4k4
Mm9::chr1:39957921..39957945,+ p3@Map4k4
Mm9::chr1:43502559..43502567,+ p5@Nck2
Mm9::chr1:45389004..45389029,+ p@chr1:45389004..45389029
+
Mm9::chr1:45390449..45390463,+ p@chr1:45390449..45390463
+
Mm9::chr1:4847841..4847877,+ p1@Tcea1
Mm9::chr1:57453537..57453541,- p@chr1:57453537..57453541
-
Mm9::chr1:63492580..63492594,+ p4@Adam23
Mm9::chr1:63492749..63492759,+ p5@Adam23
Mm9::chr1:65233234..65233248,+ p2@Pikfyve
Mm9::chr1:72120954..72120974,+ p@chr1:72120954..72120974
+
Mm9::chr1:74331210..74331286,- p1@Aamp
Mm9::chr1:95240195..95240249,+ p1@Ppp1r7
Mm9::chr2:106814590..106814622,- p4@2700007P21Rik
Mm9::chr2:109757836..109757843,+ p5@Lgr4
Mm9::chr2:117952511..117952558,+ p@chr2:117952511..117952558
+
Mm9::chr2:117952559..117952624,+ p@chr2:117952559..117952624
+
Mm9::chr2:122090590..122090610,+ p@chr2:122090590..122090610
+
Mm9::chr2:142727170..142727210,- p1@Kif16b
Mm9::chr2:142727242..142727312,- p2@Kif16b
Mm9::chr2:144993442..144993509,+ p3@Slc24a3
Mm9::chr2:16277921..16277943,+ p2@Plxdc2
Mm9::chr2:17950368..17950397,- p1@ENSMUST00000135980
Mm9::chr2:27767409..27767412,+ p@chr2:27767409..27767412
+
Mm9::chr2:29820835..29820848,+ p4@Spna2
Mm9::chr2:32462466..32462493,+ p2@St6galnac6
Mm9::chr2:48669518..48669533,+ p4@Acvr2a
Mm9::chr2:48669536..48669560,+ p3@Acvr2a
Mm9::chr2:60719354..60719373,- p7@Rbms1
Mm9::chr2:75670294..75670341,+ p2@Agps
Mm9::chr2:80157161..80157181,+ p@chr2:80157161..80157181
+
Mm9::chr2:84483772..84483778,- p@chr2:84483772..84483778
-
Mm9::chr2:84490836..84490844,- p4@Ctnnd1
Mm9::chr3:107782518..107782531,+ p1@ENSMUST00000138778
Mm9::chr3:127492818..127492847,+ p4@Tifa
Mm9::chr3:129604337..129604348,+ p3@Casp6
Mm9::chr3:135087060..135087062,- p2@Cisd2
Mm9::chr3:151928847..151928865,- p@chr3:151928847..151928865
-
Mm9::chr3:58491032..58491036,- p@chr3:58491032..58491036
-
Mm9::chr3:61963215..61963256,+ p@chr3:61963215..61963256
+
Mm9::chr3:63099346..63099360,+ p8@Mme
Mm9::chr3:66785181..66785199,- p2@Shox2
Mm9::chr3:66785201..66785226,- p3@Shox2
Mm9::chr3:66785274..66785329,+ p3@Rsrc1
Mm9::chr3:66789569..66789600,+ p1@Rsrc1
Mm9::chr3:68809362..68809407,+ p@chr3:68809362..68809407
+
Mm9::chr3:86067375..86067379,+ p@chr3:86067375..86067379
+
Mm9::chr3:99057256..99057268,+ p3@Tbx15
Mm9::chr3:99057269..99057306,+ p1@Tbx15
Mm9::chr4:108688120..108688128,+ p3@Nrd1
Mm9::chr4:114078640..114078658,+ p@chr4:114078640..114078658
+
Mm9::chr4:114078811..114078861,+ p1@Gm12824
Mm9::chr4:114079272..114079315,+ p2@Gm12824
Mm9::chr4:114079322..114079338,+ p3@Gm12824
Mm9::chr4:125939626..125939646,+ p1@Trappc3
Mm9::chr4:132567433..132567461,+ p1@Ahdc1
Mm9::chr4:147504992..147505004,+ p8@Mad2l2
Mm9::chr4:40107081..40107083,+ p@chr4:40107081..40107083
+
Mm9::chr4:43740148..43740185,+ p1@Hrct1
Mm9::chr4:57580883..57580965,+ p1@Palm2
Mm9::chr4:58219195..58219206,- p13@Svep1
Mm9::chr4:58219220..58219231,- p10@Svep1
Mm9::chr5:125621264..125621291,- p@chr5:125621264..125621291
-
Mm9::chr5:130417819..130417841,+ p2@Vkorc1l1
Mm9::chr5:134746584..134746588,- p@chr5:134746584..134746588
-
Mm9::chr5:135663377..135663465,+ p3@Baz1b
Mm9::chr5:138227467..138227491,- p3@Mepce
Mm9::chr5:143579225..143579237,- p4@Tnrc18
Mm9::chr5:143665280..143665292,- p@chr5:143665280..143665292
-
Mm9::chr5:143734094..143734112,+ +
p@chr5:143734094..143734112
Mm9::chr5:143734453..143734460,+ p@chr5:143734453..143734460
+
Mm9::chr5:147072909..147072920,+ p@chr5:147072909..147072920
+
Mm9::chr5:150480799..150480816,+ p2@B3galtl
Mm9::chr5:23931068..23931109,+ p1@Slc4a2
Mm9::chr5:31215791..31215812,+ p1@Emilin1
Mm9::chr5:31215827..31215860,+ p4@Emilin1
Mm9::chr5:31215877..31215888,+ p7@Emilin1
Mm9::chr5:31351402..31351407,+ p3@0610007C21Rik
Mm9::chr5:35292013..35292018,+ p9@Rgs12
Mm9::chr5:53981692..53981768,+ p2@Rbpj
Mm9::chr5:65498897..65498904,+ p4@Klhl5
Mm9::chr6:115604013..115604020,- p@chr6:115604013..115604020
-
Mm9::chr6:124867774..124867780,- p2@Ptms
Mm9::chr6:124915638..124915651,+ p@chr6:124915638..124915651
+
Mm9::chr6:147045072..147045077,+ p@chr6:147045072..147045077
+
Mm9::chr6:72739034..72739055,- p3@Tcf7l1
Mm9::chr6:92164891..92164900,- p2@Zfyve20
Mm9::chr7:107433988..107434074,+ p1@P4ha3
Mm9::chr7:125294130..125294134,- p@chr7:125294130..125294134
-
Mm9::chr7:134019574..134019590,- p@chr7:134019574..134019590
-
Mm9::chr7:19589396..19589444,+ p1@Irf2bp1
Mm9::chr7:29123741..29123803,- p1@Supt5h
Mm9::chr7:89761206..89761208,+ p@chr7:89761206..89761208
+
Mm9::chr7:91716821..91716828,+ p@chr7:91716821..91716828
+
Mm9::chr8:113245396..113245404,+ p4@Mtss1l
Mm9::chr8:129587797..129587816,+ p3@Pard3
Mm9::chr8:34496298..34496366,+ p1@Purg
Mm9::chr8:42331841..42331844,+ p@chr8:42331841..42331844
+
Mm9::chr8:84291960..84292004,+ p@chr8:84291960..84292004
+
Mm9::chr8:86519625..86519643,+ p@chr8:86519625..86519643
+
Mm9::chr8:90885840..90885875,- p2@Brd7
Mm9::chr8:94154961..94154969,+ p@chr8:94154961..94154969
+
Mm9::chr9:102737309..102737320,+ p3@Ryk
Mm9::chr9:110183784..110183842,+ p@chr9:110183784..110183842
+
Mm9::chr9:110183846..110183856,+ p@chr9:110183846..110183856
+
Mm9::chr9:114598997..114599002,+ p@chr9:114598997..114599002
+
Mm9::chr9:123059977..123059986,+ p3@Clec3b
Mm9::chr9:13466637..13466638,+ p1@Maml2
Mm9::chr9:14419337..14419350,- p4@Amotl1
Mm9::chr9:33535742..33535744,+ p1@ENSMUST00000116000
Mm9::chr9:44290866..44290898,+ p1@Bcl9l
Mm9::chr9:57820319..57820333,+ p@chr9:57820319..57820333
+
Mm9::chr9:59598949..59599032,+ p1@Myo9a
Mm9::chr9:82723538..82723549,+ p4@Irak1bp1
Mm9::chr9:88377370..88377425,- p1@Syncrip
Mm9::chr9:96626390..96626394,- p@chr9:96626390..96626394
-
Mm9::chrX:126284276..126284358,+ p1@Diap2
Mm9::chrX:166123081..166123091,+ p7@Mid1
Mm9::chrX:166123186..166123211,+ p3@Mid1
Mm9::chrX:38754335..38754377,+ p5@Gria3


Enriched pathways on this co-expression clusterSummary:
Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.
Analyst: Emmanuel Dimont

link to source dataset
data


GO IDGO nameFDR corrected p-value
GO:0016055Wnt receptor signaling pathway0.0274465567817716



Relative expression of the co-expression cluster over median
Analyst:





Enriched sample ontology terms on this co-expression clusterSummary:To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. Analyst: Hideya Kawaji

links to source dataset


uberon_data


Uber Anatomy
Ontology termp-valuen
multi-cellular organism1.21e-07333


TFBS overrepresentationSummary:The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. Analyst: Michiel de Hoon

link to source data
Novel motifs
data

Jaspar motifs
data


Novel motifs




JASPAR motifs


Motifs-log10(p-value)
MA0003.127.1191
MA0004.10.0981397
MA0006.10.781865
MA0007.10.938055
MA0009.10.250009
MA0014.111.8095
MA0017.10.0131191
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MA0056.10
MA0057.12.20354
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MA0063.10
MA0066.10.0364086
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MA0088.14.94178
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MA0098.10
MA0100.10.434042
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MA0103.10.0108212
MA0105.14.02801
MA0106.10.341943
MA0107.10.121237
MA0108.20.120408
MA0109.10
MA0111.10.741069
MA0113.10.105817
MA0114.10.0875179
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MA0116.10.246788
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MA0122.10.6526
MA0124.10.150274
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MA0130.10
MA0131.10.383831
MA0132.10
MA0133.10
MA0135.10.0573929
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MA0139.11.87049
MA0140.10.0155783
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MA0144.10.095957
MA0145.13.53048
MA0146.19.8921
MA0147.10.345037
MA0148.10.186605
MA0149.113.406
MA0062.20.124725
MA0035.20.00734133
MA0039.26.31193
MA0138.20.147889
MA0002.20.000622581
MA0137.20.194555
MA0104.20.778678
MA0047.20.206559
MA0112.20.129224
MA0065.20.850455
MA0150.10.046349
MA0151.10
MA0152.10.206804
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MA0154.10.472522
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MA0158.10
MA0159.10.28016
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MA0161.10
MA0162.19.84469
MA0163.14.72627
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MA0080.20.00487406
MA0018.20.0628904
MA0099.20.00458599
MA0079.238.2876
MA0102.20.229059
MA0258.10.00243784
MA0259.10.487177
MA0442.10