Personal tools

MacroAPE 1083:11-WGTGKKTTTT

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: 11-WGTGKKTTTT,CNhs13239,BestGuess:RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq/Homer(0.737747370786036),T:738.0(24.32%),B:6663.9(15.23%),P:1e-38

Motif matrix
POACGT
1266.418117.34236.162318.816
228.044249.444408.85251.66
355.3585.60865.682531.36
465.68237.638565.30869.372
56.64219.188393.354318.816
635.42476.014288.558338.742
70.73825.092230.994481.176
837.63836.9152.028511.434
96.642273.7980.738456.822
10101.84490.774209.592335.79

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

dl_1#MA0022.1-10.001002590.4772320.743749TGTGGTTTTTGGGGTTTTTCCC+
RUNX1#MA0002.230.001562480.743740.743748TGTGGTTTTTGTCTGTGGTTT+
NDT80#MA0343.100.005849582.7844110TGTGGTTTTTTTGCGTTTTTGTGGCCGGAAA-
CRZ1#MA0285.1-10.008839214.2074619TGTGGTTTTTGTGGCTTAG-
BRCA1#MA0133.1-10.00953664.5394217TGTGGTTTTTGTGTTGT-
Tal1::Gata1#MA0140.1-10.01142755.439519TGTGGTTTTTCTGGTGGGGACAGATAAG+
Pax4#MA0068.180.01184995.64056110TGTGGTTTTTGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
Foxd3#MA0041.110.01228875.84941110TGTGGTTTTTGAATGTTTGTTT+
En1#MA0027.110.01414526.73309110TGTGGTTTTTAAGTAGTGCCC+
HCM1#MA0317.1-10.01479327.0415818TGTGGTTTTTTTGTTTAT-
ADR1#MA0268.1-10.01877958.9390617TGTGGTTTTTGTGGGGT-
TBP#MA0108.200.02025099.63943110TGTGGTTTTTCCCCGCCTTTTATAC-