MacroAPE 1083:3-CCCCCCTTTTTT

Full Name: 3-CCCCCCTTTTTT,BestGuess:SEP3(MADS)/Arabidoposis-Flower-Sep3-ChIP-Seq/Homer(0.693294444999093),T:1732.0(31.85%),B:9477.2(22.18%),P:1e-52

Motif matrix

PO A C G T 1 72.744 1264.36 185.324 209.572 2 98.724 1321.516 143.756 168.004 3 133.364 1288.608 126.436 183.592 4 81.404 1087.696 251.14 311.76 5 117.776 1186.42 79.672 348.132 6 86.6 1087.696 76.208 481.496 7 107.384 230.356 77.94 1316.32 8 38.104 303.1 105.652 1285.144 9 31.176 285.78 126.436 1288.608 10 109.116 187.056 116.044 1319.784 11 46.764 292.708 143.756 1248.772 12 90.064 202.644 62.352 1376.94

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon

TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya

Target_ID	Optimal_offset	p-value	E-value	q-value	Overlap	Query consensus	Target consensus	Orientation
Klf4#MA0039.1	0	0.000713758	0.339749	0.279391	10	CCCCCCTTTTTT	CCTTCCTTTA	-
TBP#MA0108.2	1	0.000847066	0.403204	0.279391	12	CCCCCCTTTTTT	CCCCGCCTTTTATAC	-
TBP#MA0108.2	1	0.000882521	0.42008	0.279391	12	CCCCCCTTTTTT	CCCCGCCTTTTATAC	-
YER130C#MA0423.1	-1	0.00125629	0.597992	0.298289	9	CCCCCCTTTTTT	ACCCCTATT	+
YGR067C#MA0425.1	1	0.00324207	1.54323	0.49164	12	CCCCCCTTTTTT	ACCCCACTTTTTTG	+
FKH1#MA0296.1	0	0.0033467	1.59303	0.49164	12	CCCCCCTTTTTT	TCCTCTTTGTTTACAATTCA	-
MSN2#MA0341.1	0	0.00362357	1.72482	0.49164	5	CCCCCCTTTTTT	CCCCT	-
MSN4#MA0342.1	-2	0.00534225	2.54291	0.563755	5	CCCCCCTTTTTT	CCCCT	-
RGM1#MA0366.1	-2	0.00534225	2.54291	0.563755	5	CCCCCCTTTTTT	CCCCT	-
GIS1#MA0306.1	-1	0.00724029	3.44638	0.687645	9	CCCCCCTTTTTT	ACCCCTAAA	+
HMG-I/Y#MA0045.1	3	0.0129697	6.17357	0.997635	12	CCCCCCTTTTTT	GTTTTTCCATTTGTTG	-
YML081W#MA0431.1	1	0.0193662	9.2183	0.997635	8	CCCCCCTTTTTT	ACCCCGCAC	+