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MacroAPE 1083:9-GATCCGCTA

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Full Name: 9-GATCCGCTA,CNhs13799,BestGuess:SPIB.p2.SwissRegulon.nucfreq(0.570792469807206),T:1309.0(27.04%),B:8805.0(20.32%),P:1e-28

Motif matrix
POACGT
190.3211.3091153.22964.141
21199.04483.77624.8711.309
31.3091.3091.3091305.073
4206.8221066.8351.30934.034
51.3091305.0731.3091.309
61.3091.3091305.0731.309
71.309993.531312.8511.309
857.596141.37279.8491030.183
91100.869147.91730.10730.107

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

ARR10#MA0121.110.001448510.6894910.5171467GATCCGCTAAGATCCGC+
RDR1#MA0360.100.001903240.9059440.5171468GATCCGCTAGTTCCGCA-
TBS1#MA0404.120.002172881.034290.5171466GATCCGCTACGGATCCG+
YBR239C#MA0420.100.005302712.5240918GATCCGCTAGTTCCGGT-
STP4#MA0397.1-20.01138135.417517GATCCGCTATGCGCTATC-
STP3#MA0396.1-20.01180025.6168917GATCCGCTATGCGCTAGC-
ASG1#MA0275.1-10.01343126.3932716GATCCGCTATTCCGG-
SPIB#MA0081.1-10.01530737.2862617GATCCGCTATTCCTCT-
ASH1#MA0276.130.0154977.3765817GATCCGCTACCCGATCCGG-