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MacroAPE 1083:AIRE f2

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Full Name: AIRE_f2

Motif matrix
POACGT
116.42857142857148410.7959183673469535.16326530612246258.918367346938803
27.510204081632687.510204081632685.63265306122448920.65306122448985
35.6326530612244895.6326530612244898.44897959183677621.591836734693906
41.8775510204081660.036.6122448979592652.8163265306122534
50.00.033.795918367346987.51020408163268
613.142857142857171.8775510204081660.93877551020408325.346938775510242
715.9591836734694153.7551020408163360.93877551020408320.65306122448985
815.020408163265365.6326530612244895.63265306122448915.02040816326536
914.0816326530612652.81632653061225345.63265306122448918.775510204081698
1021.5918367346939453.7551020408163365.63265306122448910.326530612244925
1115.9591836734694151.8775510204081662.816326530612253420.65306122448985
129.387755102040835.6326530612244892.816326530612253423.469387755102094
130.00.93877551020408336.6122448979592653.755102040816336
140.00.040.367346938775560.938775510204083
159.387755102040833.75510204081633610.32653061224492517.836734693877606
162.81632653061225347.510204081632687.5102040816326823.469387755102094
1718.775510204081660.9387755102040836.57142857142858515.02040816326536
1816.66326530612249711.0306122448980064.459183673469389.153061224489816

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

Pax4#MA0068.170.0004816340.2292580.45839918ATTGGTTTTATTGGTTAAGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
NHP6B#MA0346.120.002323421.105950.67006818ATTGGTTTTATTGGTTAATCATATTATATATAAATAAA-
NHP6A#MA0345.130.002527631.203150.67006818ATTGGTTTTATTGGTTAATCATTTTTATATATAGGTCAT-
squamosa#MA0082.100.003018961.437020.67006814ATTGGTTTTATTGGTTAAATTTCCATTTTTGG-
AGL3#MA0001.1-40.003520151.675590.67006810ATTGGTTTTATTGGTTAACTATTTATGG-
Tal1::Gata1#MA0140.1-10.005341012.542320.74907517ATTGGTTTTATTGGTTAACTGGTGGGGACAGATAAG+
myb.Ph3#MA0054.1-80.005694142.710410.7490759ATTGGTTTTATTGGTTAAAAACGGTTA-
HAP4#MA0315.100.007639683.636490.74907515ATTGGTTTTATTGGTTAATCGCCTCTGATTGGT-
RGT1#MA0367.1-10.009587164.563490.74907511ATTGGTTTTATTGGTTAACCGGAAAAACT-
HAP2#MA0313.1-10.009951054.73670.7490755ATTGGTTTTATTGGTTAATTGGT+
RUNX1#MA0002.1-60.01015474.833660.74907511ATTGGTTTTATTGGTTAATATTGTGGTTA+
SMP1#MA0383.140.01059065.041120.74907517ATTGGTTTTATTGGTTAATGCTAATTTAATTATAGGTAA-
SRY#MA0084.1-90.0115045.47590.7490759ATTGGTTTTATTGGTTAAATTGTTTAC-
AG#MA0005.1-30.01274896.068460.74907511ATTGGTTTTATTGGTTAAACCAAATTTGG-
Hltf#MA0109.1-60.01321526.290450.74907510ATTGGTTTTATTGGTTAAATATAAGGTT-
Tcfcp2l1#MA0145.100.01337976.368750.74907514ATTGGTTTTATTGGTTAACTGGTTTGAACTGG-
NR3C1#MA0113.100.01555517.404220.82248318ATTGGTTTTATTGGTTAATCAGGACATAATGTTCCC-
ABF1#MA0265.1-20.01981269.430810.97977216ATTGGTTTTATTGGTTAATCGTATAAAGTGATAA+
Foxa2#MA0047.2-20.0206379.823220.97977212ATTGGTTTTATTGGTTAATGTTTACTTAGG+