MacroAPE 1083:AIRE f2

Full Name: AIRE_f2

Motif matrix

PO A C G T 1 16.428571428571484 10.795918367346953 5.1632653061224625 8.918367346938803 2 7.51020408163268 7.51020408163268 5.632653061224489 20.65306122448985 3 5.632653061224489 5.632653061224489 8.448979591836776 21.591836734693906 4 1.877551020408166 0.0 36.612244897959265 2.8163265306122534 5 0.0 0.0 33.79591836734698 7.51020408163268 6 13.14285714285717 1.877551020408166 0.938775510204083 25.346938775510242 7 15.959183673469415 3.755102040816336 0.938775510204083 20.65306122448985 8 15.02040816326536 5.632653061224489 5.632653061224489 15.02040816326536 9 14.081632653061265 2.8163265306122534 5.632653061224489 18.775510204081698 10 21.591836734693945 3.755102040816336 5.632653061224489 10.326530612244925 11 15.959183673469415 1.877551020408166 2.8163265306122534 20.65306122448985 12 9.38775510204083 5.632653061224489 2.8163265306122534 23.469387755102094 13 0.0 0.938775510204083 36.612244897959265 3.755102040816336 14 0.0 0.0 40.36734693877556 0.938775510204083 15 9.38775510204083 3.755102040816336 10.326530612244925 17.836734693877606 16 2.8163265306122534 7.51020408163268 7.51020408163268 23.469387755102094 17 18.77551020408166 0.938775510204083 6.571428571428585 15.02040816326536 18 16.663265306122497 11.030612244898006 4.45918367346938 9.153061224489816

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon

TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya

Target_ID	Optimal_offset	p-value	E-value	q-value	Overlap	Query consensus	Target consensus	Orientation
Pax4#MA0068.1	7	0.000481634	0.229258	0.458399	18	ATTGGTTTTATTGGTTAA	GGGGGGGGAGTGGAGTATTGGAAATTTTTC	-
NHP6B#MA0346.1	2	0.00232342	1.10595	0.670068	18	ATTGGTTTTATTGGTTAA	TCATATTATATATAAATAAA	-
NHP6A#MA0345.1	3	0.00252763	1.20315	0.670068	18	ATTGGTTTTATTGGTTAA	TCATTTTTATATATAGGTCAT	-
squamosa#MA0082.1	0	0.00301896	1.43702	0.670068	14	ATTGGTTTTATTGGTTAA	ATTTCCATTTTTGG	-
AGL3#MA0001.1	-4	0.00352015	1.67559	0.670068	10	ATTGGTTTTATTGGTTAA	CTATTTATGG	-
Tal1::Gata1#MA0140.1	-1	0.00534101	2.54232	0.749075	17	ATTGGTTTTATTGGTTAA	CTGGTGGGGACAGATAAG	+
myb.Ph3#MA0054.1	-8	0.00569414	2.71041	0.749075	9	ATTGGTTTTATTGGTTAA	AAACGGTTA	-
HAP4#MA0315.1	0	0.00763968	3.63649	0.749075	15	ATTGGTTTTATTGGTTAA	TCGCCTCTGATTGGT	-
RGT1#MA0367.1	-1	0.00958716	4.56349	0.749075	11	ATTGGTTTTATTGGTTAA	CCGGAAAAACT	-
HAP2#MA0313.1	-1	0.00995105	4.7367	0.749075	5	ATTGGTTTTATTGGTTAA	TTGGT	+
RUNX1#MA0002.1	-6	0.0101547	4.83366	0.749075	11	ATTGGTTTTATTGGTTAA	TATTGTGGTTA	+
SMP1#MA0383.1	4	0.0105906	5.04112	0.749075	17	ATTGGTTTTATTGGTTAA	TGCTAATTTAATTATAGGTAA	-
SRY#MA0084.1	-9	0.011504	5.4759	0.749075	9	ATTGGTTTTATTGGTTAA	ATTGTTTAC	-
AG#MA0005.1	-3	0.0127489	6.06846	0.749075	11	ATTGGTTTTATTGGTTAA	ACCAAATTTGG	-
Hltf#MA0109.1	-6	0.0132152	6.29045	0.749075	10	ATTGGTTTTATTGGTTAA	ATATAAGGTT	-
Tcfcp2l1#MA0145.1	0	0.0133797	6.36875	0.749075	14	ATTGGTTTTATTGGTTAA	CTGGTTTGAACTGG	-
NR3C1#MA0113.1	0	0.0155551	7.40422	0.822483	18	ATTGGTTTTATTGGTTAA	TCAGGACATAATGTTCCC	-
ABF1#MA0265.1	-2	0.0198126	9.43081	0.979772	16	ATTGGTTTTATTGGTTAA	TCGTATAAAGTGATAA	+
Foxa2#MA0047.2	-2	0.020637	9.82322	0.979772	12	ATTGGTTTTATTGGTTAA	TGTTTACTTAGG	+