MacroAPE 1083:BPTF si

Full Name: BPTF_si

Motif matrix

PO A C G T 1 1.9999999999999993 1.9999999999999993 8.0 9.000000000000009 2 0.9999999999999997 0.0 8.0 11.99999999999999 3 1.9999999999999993 0.9999999999999997 3.99999999999999 14.000000000000007 4 3.0000000000000027 4.999999999999998 6.999999999999993 6.000000000000005 5 0.9999999999999997 0.0 0.0 19.999999999999993 6 0.0 0.0 0.9999999999999997 19.999999999999993 7 0.0 0.0 16.0 4.999999999999998 8 0.9999999999999997 3.0000000000000027 0.0 17.00000000000001 9 0.9999999999999997 0.0 9.999999999999996 9.999999999999996 10 0.9999999999999997 1.9999999999999993 6.999999999999993 11.000000000000004 11 3.0000000000000027 3.0000000000000027 6.000000000000005 9.000000000000009 12 3.99999999999999 9.000000000000009 6.000000000000005 1.9999999999999993

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon

TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya

Target_ID	Optimal_offset	p-value	E-value	q-value	Overlap	Query consensus	Target consensus	Orientation
NDT80#MA0343.1	4	0.000105634	0.0502819	0.10022	12	TTTGTTGTGTTC	TTGCGTTTTTGTGGCCGGAAA	-
hb#MA0049.1	-2	0.00137071	0.652459	0.44788	10	TTTGTTGTGTTC	TTTTTTATGC	-
SRY#MA0084.1	-3	0.00212849	1.01316	0.44788	9	TTTGTTGTGTTC	ATTGTTTAC	-
BRCA1#MA0133.1	-1	0.00219079	1.04281	0.44788	7	TTTGTTGTGTTC	GTGTTGT	-
br_Z3#MA0012.1	0	0.00259508	1.23526	0.44788	11	TTTGTTGTGTTC	CTTTTAGTTTA	-
HMG-1#MA0044.1	-3	0.00283246	1.34825	0.44788	9	TTTGTTGTGTTC	GTTGTACTC	+
HCM1#MA0317.1	-4	0.00336115	1.59991	0.455553	8	TTTGTTGTGTTC	TTGTTTAT	-
En1#MA0027.1	-1	0.00385326	1.83415	0.456969	11	TTTGTTGTGTTC	AAGTAGTGCCC	+
FKH1#MA0296.1	2	0.00713687	3.39715	0.698001	12	TTTGTTGTGTTC	TCCTCTTTGTTTACAATTCA	-
MGA1#MA0336.1	0	0.00820526	3.90571	0.698001	12	TTTGTTGTGTTC	TTTAGAGTGTTCTATAGTCCT	-
id1#MA0120.1	-1	0.00953921	4.54067	0.698001	11	TTTGTTGTGTTC	TTTTCCTTTTCG	+
D#MA00445.1	0	0.00961754	4.57795	0.698001	11	TTTGTTGTGTTC	TCCATTGTTCT	+
HMG-I/Y#MA0045.1	4	0.0098495	4.68836	0.698001	12	TTTGTTGTGTTC	GTTTTTCCATTTGTTG	-
AZF1#MA0277.1	0	0.0103	4.90278	0.698001	9	TTTGTTGTGTTC	TTTCTTTTT	-
RUNX1#MA0002.2	-2	0.0127816	6.08403	0.808263	10	TTTGTTGTGTTC	GTCTGTGGTTT	+
SFL1#MA0377.1	5	0.0138969	6.61493	0.808263	12	TTTGTTGTGTTC	TTTTATTTCTTCTATTCTCTA	-
FOXI1#MA0042.1	2	0.0149382	7.1106	0.808263	10	TTTGTTGTGTTC	GGATGTTTGTTT	+
br_Z1#MA0010.1	-1	0.0157858	7.51404	0.808263	11	TTTGTTGTGTTC	GATTTGTCTATTAC	-
Pax4#MA0068.1	8	0.0164188	7.81533	0.808263	12	TTTGTTGTGTTC	GGGGGGGGAGTGGAGTATTGGAAATTTTTC	-
RREB1#MA0073.1	5	0.0170431	8.11251	0.808263	12	TTTGTTGTGTTC	TGGGGGGGGGTGGTTTGGGG	-
RUNX1#MA0002.2	-2	0.0187425	8.92141	0.808263	10	TTTGTTGTGTTC	TATTGTGGTTA	+
slp1#MA0458.1	-4	0.0187425	8.92141	0.808263	8	TTTGTTGTGTTC	TTGTTTACATT	+
SOX10#MA0442.1	-2	0.0209072	9.95185	0.849348	6	TTTGTTGTGTTC	CTTTGT	+