Personal tools

MacroAPE 1083:CNhs11725 bu f2

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: CNhs11725_bu_f2

Motif matrix
POACGT
11025.497325202485220.91223653664681049.5779241005016516.3691385641911
2444.8705954755891342.0506606801785801.2397059008439224.19566234721367
32466.092898049010324.58189732019767251.2727498289992870.40907920561624
411.2856748499535481657.82413642499731133.7171898852159.52962324365936
52806.64382362932970.00.05.712800774494621
615.2011751635706910.3151391692092252777.26076398781929.579546083226017
7155.705154544046051854.8827080735084727.497391821828774.27136996443825
81131.9762546634647454.407325112292517.7024479255899708.2705967024799
91430.256196087765527.2659576039576499.8565575349519354.9779131771493

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

Trl#MA0205.110.0004889320.2327320.4654649GCACAGCAAGAGAGAGCAA-
REST#MA0138.2100.003709751.7658419GCACAGCAATCAGCACCATGGACAGCGC-
REST#MA0138.2110.007050153.3558719GCACAGCAATTCAGCACCATGGACAGCGCC+
GAL4#MA0299.140.01258255.9892819GCACAGCAACGGGGAACAGTACTC+
BAS1#MA0278.100.01272916.0590419GCACAGCAAGCACAGCCAGAGTCAAGTCAA+
CRZ1#MA0285.1-10.01303926.2066718GCACAGCAACTAAGCCAC+
Dof2#MA0020.1-20.01503847.158316GCACAGCAAAAAGCA+
NFE2L2#MA0150.130.01627327.7460418GCACAGCAAATGACTCAGCA+
ACE2#MA0267.1-10.01678817.9911317GCACAGCAAACCAGCA+
FOXA1#MA0148.1-10.01721278.1932618GCACAGCAACAAAGTAAACA-
SPIB#MA0081.1-20.01778378.4650217GCACAGCAAAGAGGAA+