Personal tools

MacroAPE 1083:CNhs12545 bl f2

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: CNhs12545_bl_f2

Motif matrix
POACGT
138.987260067621925107.1917257106846833.6038534855212537.217160736172104
238.9164108525437375.2847360516334226.1376811141011676.66117198172172
343.84793153468264424.49931310005399355.5339810074367393.11877435782671
420.98313872666921421.548267890223215141.445319588579133.02327379452847
5132.80468621670326.681117856545917.95296513411917369.56123079263173
62.4640906220276041.9424061585977037211.0008964247031.592606794671691
73.312873239689233204.473600121332543.33829494713715265.875231691841167
84.0723644475868825203.20422932258934.4777844474752875.245621782348587
945.77576504929849119.7884391075342214.3816492805756137.054146562591725
1016.36361344626000450.4341531067252393.7892358830251456.41299756398965
1153.68339635796337517.7474694278106113.1217736198319732.44736059439408
1247.7745208255874533.184247226813625121.6837994459599514.357432501639016

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

TFAP2A#MA0003.1-50.0003363470.1601010.3202027CTTGAGCCCGGGGCCCGGGGG+
CRZ1#MA0285.1-10.001811340.8621980.6426159CTTGAGCCCGGGCTAAGCCAC+
BAS1#MA0278.100.002025050.9639230.64261512CTTGAGCCCGGGGCACAGCCAGAGTCAAGTCAA+
PUT3#MA0358.1-40.004105261.95410.8836188CTTGAGCCCGGGTTCCCGGG-
PPARG::RXRA#MA0065.230.005005652.382690.88361812CTTGAGCCCGGGTGACCTTTGCCCTAC-
ESR1#MA0112.260.005569022.650850.88361812CTTGAGCCCGGGGGGGTCACGGTGACCTGG-
Zfx#MA0146.1-20.008450334.02236110CTTGAGCCCGGGGGGGCCGAGGCCTG+
PLAG1#MA0163.140.01303616.20518110CTTGAGCCCGGGCCCCCTTGGGCCCC-
TBF1#MA0403.1-40.01318776.2773518CTTGAGCCCGGGAACCCTAA+
Ar#MA0007.1100.0154497.35371112CTTGAGCCCGGGATAAGAACACCCTGTACCCGCC+
Pax5#MA0014.1-20.01911819.1002110CTTGAGCCCGGGGGAGCACTGAAGCGTAACCG+
Tcfcp2l1#MA0145.140.02065189.83026110CTTGAGCCCGGGCCAGTTCAAACCAG+
ESR1#MA0112.250.02097119.98224112CTTGAGCCCGGGAGGTCAGGGTGACCTGGGCC-