Personal tools

MacroAPE 1083:CNhs12622 bl f1

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: CNhs12622_bl_f1

Motif matrix
POACGT
146.522648720695689.474414693254954.76224078256052799.2406958034888
2101.24772967647910.3272237783876977.98953543531343140.435511109819906
369.060633151440095.34548853694322444.6596930066996340.93418530491702
49.6866528411550952.295752169748273540.62417197289599107.39342301620064
567.9816965363698484.016777773878375.482164097169882.5193615925818857
63.9906436921480741.34191696069075823.76530423216539150.9021351149959
711.35721704814682139.807330805193261.2996343505315227.5358177961284545
80.49762854634974650.5319528262774170.2358656958583567158.7345529315146
976.156631072881959.0285616845987969.111637969291555.703169273227706
1063.56072944182247417.4467316086462575.38187288772136373.61066606180992
11112.4996221636589632.236007860815538.2715321726754486.992837802850087
1245.730789199551269.5930916645055186.72979557529277997.94632356065044

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

GAT4#MA0302.100.002354191.12059111TAATCTCTATATAAAGATCTAAA+
NHP6A#MA0345.110.002359121.12294112TAATCTCTATATATGACCTATATATAAAAATGA+
ECM23#MA0293.100.005226212.48768111TAATCTCTATATAAAGATCTAAA+
RLM1#MA0369.100.006235922.9683112TAATCTCTATATGAATCTATTTATAGAACT-
ABF1#MA0265.100.006255192.97747112TAATCTCTATATATATCACTTTATACGA-
NHP6B#MA0346.150.007316653.48272112TAATCTCTATATTCATATTATATATAAATAAA-
Cf2_II#MA0015.1-20.007385633.51556110TAATCTCTATATGTATATATAC+
ARR10#MA0121.100.0125035.9514118TAATCTCTATATGCGGATCT-
GAT3#MA0301.1-20.01254075.9693919TAATCTCTATATAGATCTACA+
ARR1#MA0274.1-40.02094689.9706618TAATCTCTATATACTTGAAT+