Personal tools

MacroAPE 1083:CNhs12825 bl f2

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: CNhs12825_bl_f2

Motif matrix
POACGT
1714.6054561834367102.55279479205998803.3268524811573529.3714505334208
2187.17050619507248135.900889405078741367.7883491064333458.99680928349153
366.19062433987813652.55926517450251220.8031652042516210.30349927144402
40.94143836626340732140.43440070476570.94143836626340737.539276552782555
50.00.00.02149.856553990074
60.00.02149.8565539900740.0
7779.6766452584188100.034995377273361139.6903493466566130.45456400772443
8506.771496847908134.255262822486421576.715326546091332.114467773585005
9307.75435032233395364.9269088708139970.3588378698871506.8164569270393
10273.427010232379641054.024274464339357.02544721873574465.3798220746205

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

Klf4#MA0039.200.001665080.7925790.58523210GGGCTGGGGCTGGGTGGGGC+
CRZ1#MA0285.110.001793970.8539280.5852328GGGCTGGGGCGTGGCTTAG-
ACE2#MA0267.1-10.002060810.9809470.5852327GGGCTGGGGCTGCTGGT-
TFAP2A#MA0003.1-10.002464791.173240.5852329GGGCTGGGGCGCCCGGGGG+
SWI5#MA0402.1-10.003371881.605010.6404878GGGCTGGGGCTGCTGGTT+
SP1#MA0079.210.004181611.990450.6612929GGGCTGGGGCGGGGCGGGGT+
Mafb#MA0117.1-20.004916172.34010.6612928GGGCTGGGGCGCTGACGG+
NFE2L2#MA0150.1-10.005570252.651440.6612929GGGCTGGGGCTGCTGAGTCAT-
Zfx#MA0146.110.006566013.125420.67006610GGGCTGGGGCGGGGCCGAGGCCTG+
CHA4#MA0283.1-10.007055193.358270.6700668GGGCTGGGGCGGCGGAGA+
RUNX1#MA0002.2-10.00780133.713420.6735719GGGCTGGGGCGTCTGTGGTTT+
Tcfcp2l1#MA0145.110.01417996.749610.79461510GGGCTGGGGCCTGGTTTGAACTGG-
INSM1#MA0155.100.01482017.054370.79461510GGGCTGGGGCTGTCAGGGGGCG+
BAS1#MA0278.1120.01737998.272830.7946159GGGCTGGGGCTTGACTTGACTCTGGCTGTGC-
ESR1#MA0112.2100.01798118.559010.79461510GGGCTGGGGCAGGTCAGGGTGACCTGGGCC-
YPR022C#MA0436.1-20.01820758.666790.7946157GGGCTGGGGCCGTGGGG-
SP1#MA0079.220.01826218.692750.7946158GGGCTGGGGCGGGGGCGGGG-
Pax4#MA0068.160.01835568.737250.79461510GGGCTGGGGCGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
MET28#MA0332.1-30.01916589.122920.7946156GGGCTGGGGCCTGTGG+
YGR067C#MA0425.140.01936789.219080.79461510GGGCTGGGGCTGAAAAAGTGGGGT-