Personal tools

MacroAPE 1083:CNhs12920 bl f2

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: CNhs12920_bl_f2

Motif matrix
POACGT
133.63665908796923573.6025346432407942.886488222091299.27606364694692
213.21897847073950298.6522378381216679.4240515256026558.10647776578429
38.019734140961116171.0150741411052649.82047624071030620.54646107747148
414.995966708738454180.047939716109822.341277868395936852.01656130700398
50.0249.401745600248150.00.0
60.00.00.0249.40174560024815
70.0249.401745600248150.00.0
80.0185.81672821986890.063.58501738037924
93.7286091457816735214.2642070091533215.31017446940994916.098754975903248
108.170682939139637101.3176294383576433.943323060323756105.97011016242709
1135.8199378092441466.93009880422774125.4374491077005221.214259879075765
1213.924351743502115111.1127095498612250.492861216876773.8718230900081

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

SP1#MA0079.2-19.52054e-050.04531780.090516910TCCCCTCCCTGCCCCCGCCCCC+
YGR067C#MA0425.100.000402820.1917420.19149112TCCCCTCCCTGCACCCCACTTTTTTG+
Trl#MA0205.110.001588060.7559190.3905299TCCCCTCCCTGCTTGCTCTCTC+
Pax4#MA0068.1160.001955620.9308750.39052912TCCCCTCCCTGCGAAAAATTTCCCATACTCCACTCCCCCCCC+
YML081W#MA0431.100.002053790.9776030.3905299TCCCCTCCCTGCACCCCGCAC+
RXR::RAR_DR5#MA0159.100.002767231.31720.43849312TCCCCTCCCTGCTGACCTCTCCGTGACCT-
btd#MA0443.1-20.005294782.520320.6577610TCCCCTCCCTGCTCCGCCCCCT-
Klf4#MA0039.2-20.005897512.807210.6577610TCCCCTCCCTGCCCTTCCTTTA-
Klf4#MA0039.200.00691833.293110.6577610TCCCCTCCCTGCGCCCCACCCA-
MZF1_5-13#MA0057.120.00691833.293110.657768TCCCCTCCCTGCTTCCCCCTAC-
opa#MA0456.1-20.009886344.70590.66330110TCCCCTCCCTGCGACCCCCCGCTG+
SP1#MA0079.200.009946284.734430.66330110TCCCCTCCCTGCACCCCGCCCC-
GABPA#MA0062.200.01001174.765560.66330111TCCCCTCCCTGCGCCACTTCCGG-
RGM1#MA0366.1-10.01033934.921510.6633015TCCCCTCCCTGCCCCCT-
GABPA#MA0062.2-20.01046494.981280.66330110TCCCCTCCCTGCCTCTTCCGGT-
IXR1#MA0323.110.01210095.760010.71905912TCCCCTCCCTGCCCCCGCTTCCGGCTT-
Ar#MA0007.190.01491447.099240.83411212TCCCCTCCCTGCATAAGAACACCCTGTACCCGCC+
MZF1_1-4#MA0056.1-50.01638917.801210.8656676TCCCCTCCCTGCTCCCCA-
MSN4#MA0342.1-10.01923189.154340.9487885TCCCCTCCCTGCCCCCT-
UGA3#MA0410.1-10.01995879.500320.9487888TCCCCTCCCTGCTCCCGCCG-