Personal tools

MacroAPE 1083:CNhs13435 bu f1

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: CNhs13435_bu_f1

Motif matrix
POACGT
125.1738571972201967.5719926093019237.4738160748441526.744512221352046
294.516138346423227.67085233927519628.0597034807042586.717483936315656
384.768677279250615.89053069314716261.3175494399553144.987420690365259
425.656063568705366.45864183389875247.90301571612463576.94645698398959
50.00.517701071636546869.4706536244657586.97582340661599
60.00.0156.964178102718250.0
71.2563369706106735155.36857562568340.339265506424156150.0
873.141428751703870.70155599587017521.13728263750772461.98391071763655
90.00.0156.964178102718250.0
1031.5607561461513638.97269298554838.7065067039365547.72422226708241
1138.13912347978147534.29233932575955672.3920010973270512.140714199850231
1226.64615262302018215.98441403605909197.1955771573033817.138034286335724

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

SOK2#MA0385.1-10.002903961.38229111CAATTGCAGTGGACCTGCAGGCA+
CRZ1#MA0285.1-20.004143651.9723819CAATTGCAGTGGGTGGCTTAG-
USV1#MA0413.120.006356263.02558112CAATTGCAGTGGCACAAATTCAGGGGGAATTT-
PHD1#MA0355.1-10.008271173.93708110CAATTGCAGTGGACCTGCAGCA+
YGR067C#MA0425.1-10.00992664.72506111CAATTGCAGTGGTGAAAAAGTGGGGT-
Mafb#MA0117.1-50.01043264.9659317CAATTGCAGTGGGCTGACGG+
ACE2#MA0267.1-40.01116235.3132717CAATTGCAGTGGTGCTGGT-
PPARG::RXRA#MA0065.200.0157227.48368112CAATTGCAGTGGGTAGGGCAAAGGTCA+
Pax4#MA0068.130.01768798.41946112CAATTGCAGTGGGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
Myf#MA0055.130.01820198.6641219CAATTGCAGTGGCAGCAGCTGCTG+