MacroAPE 1083:CRX Retina-Crx-ChIP-Seq/Homer
From FANTOM5_SSTAR
Full Name: CRX_Retina-Crx-ChIP-Seq/Homer
| Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||
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Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
|---|---|---|---|---|---|---|---|---|
| Gsc#MA0190.1 | -2 | 1.92858e-06 | 0.000918005 | 0.000611848 | 6 | GCTAATCC | TAATCC | + |
| bcd#MA0212.1 | -2 | 1.92858e-06 | 0.000918005 | 0.000611848 | 6 | GCTAATCC | TAATCC | + |
| oc#MA0234.1 | -2 | 1.92858e-06 | 0.000918005 | 0.000611848 | 6 | GCTAATCC | TAATCC | + |
| Ptx1#MA0201.1 | -1 | 3.00254e-05 | 0.0142921 | 0.00714423 | 7 | GCTAATCC | TTAATCC | + |
| Ubx#MA0094.1 | -2 | 0.00380719 | 1.81222 | 0.724706 | 4 | GCTAATCC | TAAT | + |
| GLN3#MA0307.1 | -2 | 0.00951521 | 4.52924 | 0.999747 | 5 | GCTAATCC | TTATC | - |
| Pdx1#MA0132.1 | -1 | 0.0133586 | 6.35869 | 0.999747 | 6 | GCTAATCC | CTAATT | + |
| RGT1#MA0367.1 | 1 | 0.0143902 | 6.84975 | 0.999747 | 8 | GCTAATCC | AATTTTTCCGG | + |
