Personal tools

MacroAPE 1083:GGGAATTTTTG,motif407

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: GGGAATTTTTG,motif407,CNhs13545,T:661.0(12.32%),B:6092.5(7.54%),P:1e-33

Motif matrix
POACGT
111.237109.726469.97170.066
20.66130.406615.39114.542
352.21924.457499.71684.608
4453.4461.32294.523111.709
5428.32894.523137.4880.661
6152.030.6610.661507.648
7115.01437.01676.015432.955
80.66113.8810.661645.797
928.423113.03124.457495.089
1015.2030.661121.624523.512
11111.709123.607340.41585.269

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

RELA#MA0107.100.001735240.8259720.8502710GGGAATTTTTGGGGAATTTCC+
Pax4#MA0068.1190.002053270.9773570.8502711GGGAATTTTTGGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
TEC1#MA0406.100.003721531.771450.850278GGGAATTTTTGGGGAATGT-
NF-kappaB#MA0061.100.004132581.967110.8502710GGGAATTTTTGGGGAATTTCC+
SUM1#MA0398.1-10.004847552.307430.850279GGGAATTTTTGAAAATTTTT+
REL#MA0101.100.00536022.551460.8502710GGGAATTTTTGGGGGATTTCC+
ARO80#MA0273.1100.008093533.852520.99974711GGGAATTTTTGGATAATTCTCGGCAAGTATGT+
LYS14#MA0325.110.01097565.224380.9997477GGGAATTTTTGCCGGAATT+
dl_1#MA0022.100.01513137.202520.99974711GGGAATTTTTGGGGGTTTTTCCC+
Foxd3#MA0041.1-20.01693668.061840.9997479GGGAATTTTTGGAATGTTTGTTT+
SUT2#MA0400.170.01844658.780540.99974711GGGAATTTTTGAAATTTTCGGAGTTTATCAT-