MacroAPE 1083:MCR f1

Full Name: MCR_f1

Motif matrix

PO A C G T 1 2.722222222222223 1.7222222222222219 0.722222222222221 1.833333333333334 2 4.888888888888887 0.0 0.0 2.1111111111111143 3 0.8888888888888891 0.0 6.111111111111111 0.0 4 2.888888888888891 0.0 2.0000000000000018 2.1111111111111143 5 3.22222222222222 2.888888888888891 0.8888888888888891 0.0 6 0.0 5.222222222222222 0.8888888888888891 0.8888888888888891 7 4.111111111111116 0.0 0.0 2.888888888888891 8 1.3888888888888862 1.166666666666669 4.166666666666665 0.2777777777777779 9 1.166666666666669 1.3888888888888862 4.166666666666665 0.2777777777777779 10 1.277777777777781 0.2777777777777779 0.2777777777777779 5.166666666666666 11 0.0 1.111111111111113 1.7777777777777781 4.111111111111116 12 1.111111111111113 0.0 5.888888888888894 0.0 13 3.111111111111108 0.0 0.0 3.888888888888892 14 2.0000000000000018 0.0 2.0000000000000018 3.000000000000003 15 0.0 2.1111111111111143 4.888888888888887 0.0 16 0.8888888888888891 0.0 2.0000000000000018 4.111111111111116 17 3.277777777777776 0.2777777777777779 2.277777777777775 1.166666666666669

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon

TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya

Target_ID	Optimal_offset	p-value	E-value	q-value	Overlap	Query consensus	Target consensus	Orientation
Ar#MA0007.1	3	0.00013406	0.0638127	0.127625	17	AAGAACAGGTTGTTGTA	GGCGGGTACACGATGTTCTTAT	-
NR3C1#MA0113.1	1	0.00256674	1.22177	0.950994	17	AAGAACAGGTTGTTGTA	TCAGGACATAATGTTCCC	-
ESR2#MA0258.1	1	0.00547271	2.60501	1	17	AAGAACAGGTTGTTGTA	CAAGGTCACGGTGACCTG	+
MYC::MAX#MA0059.1	-2	0.00549184	2.61412	1	11	AAGAACAGGTTGTTGTA	GAGCACGTGGT	+
En1#MA0027.1	-6	0.00730897	3.47907	1	11	AAGAACAGGTTGTTGTA	AAGTAGTGCCC	+
sna#MA0086.1	-5	0.0118184	5.62556	1	6	AAGAACAGGTTGTTGTA	CAGGTG	+
Pax4#MA0068.1	5	0.0157906	7.51632	1	17	AAGAACAGGTTGTTGTA	GGGGGGGGAGTGGAGTATTGGAAATTTTTC	-
MAX#MA0058.1	-2	0.0172426	8.20749	1	10	AAGAACAGGTTGTTGTA	AACCACGTGA	+