Personal tools

MacroAPE 1083:Motif46

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: motif46

Motif matrix
POACGT
0150342075237202701
0239851334268061405
0300335300
0433530000
0500335300
0600335300
0700335300
0833530000
0928492699268421140

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

UGA3#MA0410.100.001648830.78484318GGGAGGGAGCGGCGGGA+
SP1#MA0079.220.00326491.5540918GGGAGGGAGGGGGGCGGGG-
MZF1_5-13#MA0057.1-10.006871783.2709718GGGAGGGAGGGAGGGGGAA+
Trl#MA0205.100.007335413.4916619GGGAGGGAGGAGAGAGCAA-
EWSR1-FLI1#MA0149.140.008089823.8507519GGGAGGGAGGGAAGGAAGGAAGGAAGG+
DAL81#MA0290.190.008234083.9194219GGGAGGGAGAAAAGCCGCGGGCGGGATT+
YML081W#MA0431.100.008740754.160619GGGAGGGAGGTGCGGGGT-
hkb#MA0450.110.01250585.9527818GGGAGGGAGGGGGCGTGA+
Pax4#MA0068.110.01835478.7368219GGGAGGGAGGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
RGM1#MA0366.1-30.01907589.0800815GGGAGGGAGAGGGG+