Personal tools

MacroAPE 1083:Motif489

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: motif489

Motif matrix
POACGT
0100831050
021956785774090714054
0300831050
0408310500
0500083105
0600831050
0700831050

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

ACE2#MA0267.1-10.0009562520.4551760.644176GGGCTGGTGCTGGT-
SP1#MA0079.210.002186111.040590.644177GGGCTGGGGGGCGGGGT+
SWI5#MA0402.1-10.002233681.063230.644176GGGCTGGTGCTGGTT+
Tcfcp2l1#MA0145.170.00270661.288340.644177GGGCTGGCTGGTTTGAACTGG-
SP1#MA0079.220.005302722.524090.8413657GGGCTGGGGGGGCGGGG-
Hand1::Tcfe2a#MA0092.100.005302722.524090.8413657GGGCTGGGGTCTGGCAT+
DAL81#MA0290.190.008521674.0563217GGGCTGGAAAAGCCGCGGGCGGGATT+
BRCA1#MA0133.100.009951064.736717GGGCTGGGTGTTGT-
UGA3#MA0410.100.01111175.2891517GGGCTGGCGGCGGGA+
CRZ1#MA0285.110.01739378.2794217GGGCTGGGTGGCTTAG-
REST#MA0138.1120.01946869.2670517GGGCTGGGCGCTGTCCATGGTGCTGA+
btd#MA0443.130.02066399.8360117GGGCTGGAGGGGGCGGA+