Personal tools

MacroAPE 1083:Motif561

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: motif561

Motif matrix
POACGT
0137024200516002216771
023523168747413217631
03001338680
04133868000
05133868000
06001338680
07001338680

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

Klf4#MA0039.130.0002388520.1136940.227337GGGAAGGTAAAGGAAGG+
EWSR1-FLI1#MA0149.1-10.0009580110.4560130.2911566GGGAAGGGGAAGGAAGGAAGGAAGG+
SPI1#MA0080.200.001133150.5393810.2911566GGGAAGGCGGAAG+
GCR2#MA0305.100.001223650.5824590.2911567GGGAAGGAGGAAGC-
TEC1#MA0406.100.001816810.86480.3458327GGGAAGGGGGAATGT-
SPI1#MA0080.200.005183312.467260.822217GGGAAGGAGGAAGT+
Stat3#MA0144.140.009587954.563860.9997476GGGAAGGTTCCAGGAAG+
SP1#MA0079.210.01007454.795450.9997477GGGAAGGGGGGGCGGGG-
Kr#MA0452.100.0126876.039020.9997477GGGAAGGCAAAAGGGTTA+
STAT1#MA0137.270.01567057.459140.9997477GGGAAGGGGTTTCCGGGAAATG-
Eip74EF#MA0026.110.01642747.819440.9997476GGGAAGGCCGGAAG+
ETS1#MA0098.100.01667357.936570.9997476GGGAAGGCGGAAA-
GABPA#MA0062.120.02003729.537710.9997477GGGAAGGACCGGAAGAG+