Personal tools

MacroAPE 1083:Motif688

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: motif688

Motif matrix
POACGT
010116271432769114
02410115203051832703
03342451081018709100253
04001628621155
05156303266405050
06543647041513212556
075591093078015029

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

IME1#MA0320.120.003959191.8845716GCTGAGCCCGCCGAG+
NHLH1#MA0048.150.004257212.0264317GCTGAGCACGCAGCTGCGC-
CHA4#MA0283.110.004675542.2255617GCTGAGCGGCGGAGA+
NFE2L2#MA0150.110.006188432.9456917GCTGAGCTGCTGAGTCAT-
CRZ1#MA0285.130.01411456.7185116GCTGAGCGTGGCTTAG-
BAS1#MA0278.1140.01502137.1501417GCTGAGCTTGACTTGACTCTGGCTGTGC-
Mafb#MA0117.100.01521587.2427117GCTGAGCGCTGACGG+
PDR8#MA0354.100.01597897.6059717GCTGAGCGCGGAGAT+