MacroAPE 1083:Motif GANTTC
From FANTOM5_SSTAR
Full Name: motif_GANTTC
| Motif matrix | |||||||||||||||||||||||||||||||||||
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Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
|---|---|---|---|---|---|---|---|---|
| dl_2#MA0023.1 | 3 | 0.00398356 | 1.89618 | 1 | 6 | GAATTC | GGGGATTTCC | + |
| SPT23#MA0388.1 | 2 | 0.00521066 | 2.48028 | 1 | 6 | GAATTC | TTGATTTC | - |
| NF-kappaB#MA0061.1 | 2 | 0.00549046 | 2.61346 | 1 | 6 | GAATTC | GGGAATTTCC | + |
| REL#MA0101.1 | 3 | 0.0065181 | 3.10262 | 1 | 6 | GAATTC | GGGGATTTCC | + |
| STAT1#MA0137.2 | 0 | 0.0135464 | 6.4481 | 1 | 6 | GAATTC | GGTTTCCGGGAAATG | - |
| che-1#MA0260.1 | 0 | 0.0160826 | 7.65531 | 1 | 6 | GAATTC | GGTTTC | - |
| RELA#MA0107.1 | 3 | 0.0180633 | 8.59812 | 1 | 6 | GAATTC | GGGAATTTCC | + |
| RXRA::VDR#MA0074.1 | 8 | 0.0194081 | 9.23824 | 1 | 6 | GAATTC | GGGTCAACGAGTTCA | + |
