Personal tools

MacroAPE 1083:Motif GNACTT

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: motif_GNACTT

Motif matrix
POACGT
010019360
02484484484484
031936000
040193600
050001936
060001936

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

HNF4A#MA0114.110.005762192.742816GAACTTTGACCTTTGGCCT-
GABPA#MA0062.210.01216385.7899816GAACTTGCCACTTCCGG-
Nkx3-2#MA0122.110.01807848.6053216GAACTTTCCACTTAA-
bap#MA0211.1-10.01845138.782815GAACTTCACTTAA-
NKX3-1#MA0124.100.01918799.1334316GAACTTATACTTA+
NR2F1#MA0017.110.01963889.3480716GAACTTTGACCTTTGAACCT+