Personal tools

MacroAPE 1083:Motif GNCATG

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: motif_GNCATG

Motif matrix
POACGT
010082720
022068206820682068
030827200
048272000
050008272
060082720

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

TP53#MA0106.190.001597520.760420.9209026GACATGACATGCCCGGGCATGTCCGG-
NFE2L1::MafG#MA0089.100.001934670.9209020.9209026GACATGGTCATG-
Pax2#MA0067.110.009898044.7114716GACATGAGTCACGG+
ZAP1#MA0440.190.01402616.676416GACATGACCTTAAAGGTCATG+
ESR1#MA0112.130.01892919.0102616GACATGGGGGTCACGGTGACCTGG-
YY1#MA0095.100.01905169.0685716GACATGGCCATC+
SOK2#MA0385.100.02019869.6145516GACATGTGCCTGCAGGT-
Pou5f1#MA0142.140.02064789.8283416GACATGCTTTGTTATGCAAAT+