Personal tools

MacroAPE 1083:Motif TAGNTC

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: motif_TAGNTC

Motif matrix
POACGT
010001520
021520000
030015200
04380380380380
050001520
060152000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

SRD1#MA0389.110.002755651.3116916TAGATCGTAGATCT-
GAT3#MA0301.120.003672511.7481116TAGATCTGTAGATCT-
RORA_2#MA0072.160.004944982.3538116TAGATCTATAAGTAGGTCAA+
YPR013C#MA0434.120.007816093.7204616TAGATCTGTAGATCA+
PPARG#MA0066.110.01077695.1297916TAGATCGTAGGTCACGGTGACCTACT+
GAT4#MA0302.120.01124715.3536416TAGATCTTTAGATCTTT-
RORA_1#MA0071.130.0189529.0211616TAGATCATCAAGGTCA+