MacroAPE 1083:Motif TAGNTC
From FANTOM5_SSTAR
Full Name: motif_TAGNTC
| Motif matrix | |||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
|---|---|---|---|---|---|---|---|---|
| SRD1#MA0389.1 | 1 | 0.00275565 | 1.31169 | 1 | 6 | TAGATC | GTAGATCT | - |
| GAT3#MA0301.1 | 2 | 0.00367251 | 1.74811 | 1 | 6 | TAGATC | TGTAGATCT | - |
| RORA_2#MA0072.1 | 6 | 0.00494498 | 2.35381 | 1 | 6 | TAGATC | TATAAGTAGGTCAA | + |
| YPR013C#MA0434.1 | 2 | 0.00781609 | 3.72046 | 1 | 6 | TAGATC | TGTAGATCA | + |
| PPARG#MA0066.1 | 1 | 0.0107769 | 5.12979 | 1 | 6 | TAGATC | GTAGGTCACGGTGACCTACT | + |
| GAT4#MA0302.1 | 2 | 0.0112471 | 5.35364 | 1 | 6 | TAGATC | TTTAGATCTTT | - |
| RORA_1#MA0071.1 | 3 | 0.018952 | 9.02116 | 1 | 6 | TAGATC | ATCAAGGTCA | + |
