Personal tools

MacroAPE 1083:Motif TGAANC

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: motif_TGAANC

Motif matrix
POACGT
0100011520
0200115200
0311520000
0411520000
052880288028802880
0601152000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

STE12#MA0393.100.001037340.4937720.9875446TGAAACTGAAACA+
che-1#MA0260.1-10.006129942.9178515TGAAACGAAACC+
AP1#MA0099.200.008258473.9310316TGAAACTGACTCA+
USV1#MA0413.1100.01500057.1402216TGAAACAAATTCCCCCTGAATTTGTG+
IRF1#MA0050.150.01591617.5760816TGAAACGAAAGCGAAACC+
STAT1#MA0137.160.01617547.699516TGAAACGGAAAACGAAACTG+
OPI1#MA0349.100.01773648.4425216TGAAACCGAACCG+
RXRA::VDR#MA0074.100.02097359.9833916TGAAACTGAACCCGATGACCC-