Personal tools

MacroAPE 1083:Motif TTGCAN

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: motif_TTGCAN

Motif matrix
POACGT
0100014688
0200014688
0300146880
0401468800
0514688000
063672367236723672

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

Ddit3::Cebpa#MA0019.140.000327790.1560280.3120566TTGCAAGGGATTGCATCT-
slbo#MA0244.110.00161870.7705010.7705016TTGCAAATTGCAAA+
Sox2#MA0143.110.005807232.7642416TTGCAATTTGCATAACAAAGG-
CEBPA#MA0102.210.006343953.0197216TTGCAAATTGCGAAA-
nub#MA0453.150.006363173.0288716TTGCAACTAATTTGCATA-
Pou5f1#MA0142.120.006509753.0986416TTGCAAATTTGCATAACAAAG-
Cebpa#MA0102.140.01040144.9510616TTGCAAGAGATTGCGAAA-
AFT1#MA0269.170.01518117.2262116TTGCAATTACATATTGCACCCGATTGG+