Personal tools

MacroAPE 1083:NFATC1 motifA:Jurkat-NFATC1-ChIP-Seq/Homer

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: NFATC1_motifA:Jurkat-NFATC1-ChIP-Seq/Homer

Motif matrix
POACGT
199353112686
2107304437996
322551785
42221838
52221838
62183822
72183822
8170521352
9576601091018
10149468256971

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

NFATC2#MA0152.1-13.19696e-060.001521750.003033097ATTTTCCATTTTTTCCA+
HSF1#MA0319.1-10.0006393930.3043510.2108878ATTTTCCATTTGTTCCAT-
STB3#MA0390.170.0006668410.3174170.21088710ATTTTCCATTGTCCAAAATTTTTCACTCTGG+
HMG-I/Y#MA0045.110.001094460.5209620.2574710ATTTTCCATTGTTTTTCCATTTGTTG-
SFP1#MA0378.1100.00135690.6458830.2574710ATTTTCCATTATTGAAAAAAATTTTCTACGG+
squamosa#MA0082.1-10.001927230.9173610.3047419ATTTTCCATTATTTCCATTTTTGG-
EDS1#MA0294.110.00299971.427860.4065648ATTTTCCATTATTTTTCCG-
dl_1#MA0022.140.004266342.030780.5059588ATTTTCCATTGGGGTTTTTCCC+
YKL222C#MA0428.1-10.007594243.614860.7984089ATTTTCCATTATTTCCGTT-
znf143#MA0088.110.008581744.084910.79840810ATTTTCCATTGATTTCCCATAATGCCTTGC+
YRM1#MA0438.1-10.009898244.711560.7984088ATTTTCCATTATTTCCGT-
SFL1#MA0377.160.0102274.868070.79840810ATTTTCCATTTTTTATTTCTTCTATTCTCTA-
ETS1#MA0098.1-20.01225015.831050.7984086ATTTTCCATTCTTCCG+
STAT1#MA0137.170.01245985.930880.7984087ATTTTCCATTCAGTTTCATTTTCC-
id1#MA0120.1-10.01262316.008620.7984089ATTTTCCATTTTTTCCTTTTCG+
RGT1#MA0367.120.01489667.09080.8494399ATTTTCCATTAATTTTTCCGG+
ELF5#MA0136.100.01522067.245010.8494399ATTTTCCATTTACTTCCTT+
RELA#MA0107.130.01986459.455480.9919097ATTTTCCATTGGGAATTTCC+