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MacroAPE 1083:SRF do

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Full Name: SRF_do

Motif matrix
POACGT
1569.0517601466087188.14145917585756623.7866189871102795.0201616904222
221.345233347111682039.280267742886372.5153493968474742.859149513156964
321.232073622547082082.14275250285444.66830692367334267.95686695092692
41151.375321237404559.8314033851878516.05629484668137948.7369805307262
5359.968052106164925.0708870110691464.512152206339661726.4489086764295
61710.111254612186520.31018622486939122.1193310802891323.4592280826575
7224.1251539400337362.2049718150050355.3158254053250861834.3540488396375
81493.75038924886776.646567219473158.107279479370575547.4957640522936
9718.18667768928556.742667620263134128.184932809888551272.8857218805626
10116.440763098952294.9000771012933652040.619580277528514.03957952222673
1156.9307737509736859.8263480395506822073.527480384846535.71539782463086
12384.2234353655347390.232916699768851077.180694792354324.36295314234144
13617.31616982921671236.6831617709977176.30258777065475145.69808062912855
141544.204496751980763.96108848186516266.5608904415209301.2735243246348
15319.9319203818095266.9500855877998450.27440181428691138.8435922161052

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

SRF#MA0083.1-12.63783e-121.25561e-092.49202e-0912TCCATATATGGGCATCCATATATGGGC-
AG#MA0005.101.25236e-050.005961210.0026026711TCCATATATGGGCATACCAAATTTGG-
squamosa#MA0082.1-11.27607e-050.006074110.0026026714TCCATATATGGGCATCCAAAAATGGAAAT+
AGL3#MA0001.1-11.37747e-050.006556780.0026026710TCCATATATGGGCATCTATTTATGG-
MCM1#MA0331.110.001832750.8723890.19238311TCCATATATGGGCATTTCCTAATTGGG-
TBP#MA0108.2-10.002491261.185840.21395914TCCATATATGGGCATGTATAAAAGGCGGGG+
TBP#MA0108.2-10.002491261.185840.21395914TCCATATATGGGCATGTATAAAAGGCGGGG+
Hltf#MA0109.1-30.005552032.642770.40347210TCCATATATGGGCATATATAAGGTT-
NHP6B#MA0346.140.006218952.960220.41965615TCCATATATGGGCATTCATATTATATATAAATAAA-
ASH1#MA0276.1-10.007587933.611860.477910TCCATATATGGGCATCCCGATCCGG-
NHP6A#MA0345.140.008325363.962870.48800115TCCATATATGGGCATATGACCTATATATAAAAATGA+
YER130C#MA0423.1-40.01018184.846520.5062619TCCATATATGGGCATAATAGGGGT-
SIG1#MA0379.1-40.012375.888120.5564885TCCATATATGGGCATTATAT-
Gata1#MA0035.200.01632767.771940.6723511TCCATATATGGGCATTTCTTATCTGT-
twi#MA0249.1-10.01636897.791580.6723512TCCATATATGGGCATCAACATATGCGA-